hsd17b7 (hsd17b7,LOC107551038,LOC107758362,LOC107692446,LOC107724130)


Basic Information

Item Value
gene id hsd17b7
gene name hsd17b7,LOC107551038,LOC107758362,LOC107692446,LOC107724130
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16610280 ~ 16617199 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241042.1
TGTGCGAACTCCATACGTACACAGAAGCTGCTGGAAAACCACGTTACGAAGGGAAAGTACAGTATCACGGGTAGCGTAGTCGCATATTGTCTGAATGTAAAGACAGGATGAAGAAAGTAGTGTTGGTAACCGGTGCAAACAGTGGCATTGGCCTTGCCCTGTGTGAGCGTCTGCTGAGCCAGGATGCCAAGCTGCAGCTCTGTCTGGCCTGCAGGAACATGCAGAGGGCTGATGCTGCTCGACAGGCTCTTCTAGTGTCTCACCCTCGCGCTCAGGTTACTCTGCTGCACTTAGACGTAGGCAACATGGGCTCTGTGCTCAGGGCTGCCGAGGAGTTCAAGCAGAAGTACAACAGATTGGACTGTCTGTATCTAAATGCTGGTATCATGCCTAATCCCAGGGTAGATCACAAAGCCTTTTATAAAGGCCTGTTTTCTAGTAATATGGTTCGCATGTTTGCCACGGGGGAGGGACTTCTGACCCAGGAAGATAAGGTCACACCCAATGGTTTGCAGGAGGTCTTTGCCACTAATCTTTTTGGTCATTTCCTTCTGGTGAGAGAACTGGAGCCTTTATTGTGTCAAATGGACCACAATTCTCTAGTGATCTGGACATCCTCCAGTAATGCCCAGCGTTCTGCCTTTAGTCTAGACGACATGCAGCATCAGAAAGGCCGTGAGCCCTACAGCTCCTCGAAATATGCATCCGATCTACTTAGCTTAGCCCTAAACCGTCACTACAACAACCAGGGATTGTACTCATCAGTGATCTGTCCCGGTCTGGTCATGACTAACCTCACCTATGGCATTCTACCATCATTCTTCTGGACTCTCATCATGCCAATAATGTGGCTTATAAGGATTTTCACCAACACTTTTACCCTCTCGCCTTACAATGGAGCAGAGGCTCTGTTTTGGCTGTTCATGCAGAAACCTGAGTCACTGGACCCGATGGCCAAATACCACAGTTTGACCTCTGGGCTTGGAAACAATTACACCCAACCACACAAGatgGATATTGATGAAAACATGTCAGAGGCCCTCTATGTGAAGTTATTAGAGCTCGAGGATACAGTGAGGAAGAAACTGAGAGACGAGGATGTagatatcaaaacaaaaaactaaatgtggACACAAAACCTCATGCTTTCTATCACCTCATAACACATTTCCTTCTTAAAGTATTCTCTAAGGAATGGATTCACCTTgcgaatatttatttttcttgatgATCTATAGAAACAGCTTAtgaaatgataatgataatcaCGTTTAGATTGTATTTACCAAAAGTACTTTAATCCAAACTGTTGCTTTCCCTTGCAGTTGAATGTACAACTTTGGCTTTACTATCACCATGCTCTACTTAGAagtattgtgcatttatatttgttgcAGTGCATTCCAAGGTGAAtggtttttacatttctaattacTGTGAAGGGTCAACAGTTTCTGACTCTGATGAAAAGCGGACCACAATTCCTACGTGgatttttagctgtttttaatgtCCATTTTAATGTGCCCCCAAAGGGATCTCTTCCAAGATGTTCTGATTAATATGAAAAACTAATTGTGTGGTGTCACTGCTGAGGGATTCGGGCATCAGGCTGTGAAAAATGAAATCTGCTCTTTCcagtgaacaaaaatatatgtgtggaactgtatatgcacattttatgattaataattcagcttaaaatataaactatttgTAGTGTTTTAAGATTTCACTTAACTTTGACAATATTTTACAGATCTGAATCTTttccaacaaaacaaataataaatctaaaatgtaatttgtgtgaTATACTTGCCGTACAGATACATGTGCgactgagactttttttttttacaatcttttctctttttttgtattagctCTCAAAGCACAAAGCAAATGCAACAAAGTAATATGAAGTGCCTTTGAACAATTTATTCAACTACGTTGCGTTTAATTAGCCTATTGTACATATGAGAAAGTAATGATTGCAATGCTCTGGATGAGATTTGGCAATGTAGGGAGATTGCAGATATTGATGTTGCCATGGTGACGAAGATCATAAAGATGCACTTCCCTGTGTTAATAGAGAAACGTGCATACTGAATCCATCTTGACTTTGCATGTTTTGCAAATaagtttagatatatttttaacacaacTTGTCAGCCTTACCTTTGTCTTGCGCGCTGATGTCCTATGGTTACACGTCGAGATGTTTGGTATATAACTTCTAATGAAGCTGGAGCCTATTTGCGCTGTTTTCTTTAAACTAAACAATATTAATCCGTTATACAGGATGAAGCGGTGTAAGCGCGTGTCGGTTGATCTTGTATTTCGTGACTGGTTAGATGTCGTACAGCTGCTGTATGCACCGGCTGAACTGTCTCCACATCTTCAGGATCCGCAAAGATTTGTTGTAGAGGGACTGATAAACCGCTCGCGTCGCAGTCCGCTTCTTCGGCGAAGCCGCTGAGTTTAGGGTTGCAGAATGCCCAGACCATGCCACAAAAGTACACAAAAAACGCTGACATCACCAAAATCATGAGCGCATAAGACTCGATCATAGCCTCGGTCACCACGTTGGGCATCCTTGCGCGACGAAAAACCACTTCCACGAATACACAAAGCTCGAGTTGTGCTCAGTCGAGGGGTCGTTAGCTGAGTGTCCGTGAATCAGGGTTCTTCTGTCCTCCAGCGCTCGAGCCTCACGCCTGCTTCtgcctttattacagtttaaggAAAGTTTCGCACTTCGCTATATTTCTTTGTCAATAAAAAATACGTGTTTATGACGAGAGGAAATGAGATTGCACATTGATCTAAACGCTATGGGAGGGCACGTGGAGAAAGACGCTGTTTTAAACTAGTGTTTAATTCGACCCGTTATATTAGGCGTGCTGGTGTCAGAAAATATTAACAGTAGTTTCCACAAATCATTTGTAGTGGAAACTGGGATGATTGCACATTTTTGAAAGACAcaccccaccccaccccccTGCCACTCACTCACCAGGGATTAcgcaaaaatattctttactgttttttttttagctttctgtTTTTTCAGGAAAATCACATCAAAGTTCATCATAGAAGCCTGTTTGGTGTTTGATGTGTGTTCACACTTGTTTCACAATGTTTTACCTGAAGTGTGAACACACCCTCGCACAATGCCAAACCTGCCTGACTTCTGTGTAAAAGAGCAATTCTGAGAAATTTCTAAATCAGTGTTGACCAAAACAGGTTTATTATGATCCGAGTGTGAGAATTTTAGGTGATCATGGGTCAAATAATACAGTTGTATACATAAAATCCTTTTAAAGTAGTAAATAAAAGATGAACGCAATGAAAA

Function

symbol description
hsd17b7 Predicted to enable 3-keto sterol reductase activity. Predicted to be involved in cholesterol biosynthetic process. Predicted to act upstream of or within steroid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human HSD17B7 (hydroxysteroid 17-beta dehydrogenase 7).

NR:

description
3-keto-steroid reductase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K13373 HSD17B7; 17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241042.1 True 3361 mRNA 0.41 9 16610280 16617199

Neighbor

gene id symbol gene type direction distance location
serbp1a LOC107594603,LOC107692416,LOC107758366,LOC107724138 coding downstream 617 16603295 ~ 16609663 (-)
slc35d1a slc35d1a,LOC107724140,LOC107551012,LOC107684099,LOC107758361,LOC107594604,LOC107692433,LOC108441641 coding downstream 32217 16571144 ~ 16578063 (-)
mier1a mier1,LOC107758364,LOC107724131,LOC107684256,LOC107551013,LOC107692413 coding downstream 39819 16563950 ~ 16570461 (-)
dmrt2b dmrt2b,LOC107684342,LOC107551024,LOC107692445 coding downstream 221866 16384336 ~ 16388414 (-)
LOC122347428 tmem125,LOC107725195,LOC107684333,LOC107551025,LOC107594640 coding downstream 260011 16340305 ~ 16350269 (-)
ddr2a ddr2,ddr2a,LOC107724144,LOC107551036,LOC107594601 coding upstream 1373 16618572 ~ 16647615 (-)
uap1 uap1,LOC107724142,LOC107551035,LOC107692418 coding upstream 32266 16649465 ~ 16659733 (-)
LOC122346973 LOC107551033,LOC107711121,LOC107684213,LOC107732445,LOC107692421,LOC107594625 coding upstream 59086 16676285 ~ 16683433 (-)
nos1apa nos1ap,LOC107711121,LOC107594625 coding upstream 70179 16687378 ~ 16764274 (-)
rgs5a rgs5a,LOC107684230,LOC107732440,LOC107564083,LOC107685321,LOC108441543 coding upstream 171478 16788677 ~ 16796152 (-)
G45770 NA non-coding downstream 287475 16320413 ~ 16322805 (-)
G45753 NA non-coding downstream 339172 16270902 ~ 16271108 (-)
G45752 NA non-coding downstream 340888 16268915 ~ 16269392 (-)
G45751 NA non-coding downstream 342738 16267183 ~ 16267542 (-)
G45709 NA non-coding downstream 491694 15902216 ~ 16118586 (-)
G45897 NA non-coding upstream 570257 17187456 ~ 17187794 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding upstream 897439 17514638 ~ 17518605 (-)
G45993 NA non-coding upstream 1190422 17807621 ~ 17808115 (-)
G46000 NA non-coding upstream 1205337 17822536 ~ 17822735 (-)
LOC122346731 nit2,LOC107585165,LOC107673472,LOC107582734,LOC107685305 non-coding upstream 1423165 18040364 ~ 18044630 (-)
fam183a fam183a,LOC107551015 other downstream 246260 16361167 ~ 16364020 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other downstream 549814 16059893 ~ 16060466 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other downstream 550513 16058968 ~ 16059767 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 845173 15756309 ~ 15765107 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other downstream 1004810 15603910 ~ 15605470 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 199441 16816640 ~ 16830261 (-)
G45895 NA other upstream 569490 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 618591 17235790 ~ 17246386 (-)
G45910 NA other upstream 690616 17307815 ~ 17308478 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other upstream 765128 17382327 ~ 17414139 (-)

Expression


Co-expression Network