G25700



Basic Information


Item Value
gene id G25700
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1728532 ~ 1730623 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU29011
CTGCAGTGTACCAAAGACAGTCTACAAAACGCATTTTAAAACCGCCACTGTTCTCTAAGTCACAAACATGTTGTAACCAATCCCATTAACATGCAGGGTGGGCTTTAGCATTTTTTTTTTTTTTTTTACCTTTATTTTCGCTTTTTACGATGCAGATTGTGTCAAAGAATCTTTACAGTGATAACTGGTATATAATTTTTGGCTGCACAGCAGCTCTTAAAGAAAATGGTGTCATTGTCCAGCTTAAGTAAATTCAGTATTGATTCATTCTGTTGTAAGAATCAATAGTTATTCATTTAGTTAATTTATCTATATCAGCACTGGAGTAAACAGTGATGTCATCATCCAGCTCAGTTCAGTTTGCATACAATGGTGTCGATGCAGGCAGATCAAAACATTGTCGAATATCAAATGTCAAGTGTCCCCAACTAAGCAAGCCAAAGGCTATCATTAACTATGCTGCTAAGCAGGTGGGTCTCAAGAGAAGCCAGGTTATTCCAGTATATTTTTCTGTTGATATGAAAAACCTGGTAAATTTAGCAATATAGCGGGTGAATTATGTATATGATGTATATTACGATGTTATGATGAACTATATGCCTTTCTCCACTGACATTCTAAGTTGTTCAAAGAGTTTCTAAGGATGCTGATTTTTAGAAGGCAGCTGTCTGACTCTGAGATGGTAAATGGGAAAATGGTTTGTGTAACATTAGCAACACATTATTAGCTGTTTGATAATGTAATCAAGACAATGGCTAATCATATCAGTTACTGTTATGTGTCCAACGTAGAGAGCAATACATAAAATGCATTACCATTCTGATACATCGACTTGTAGACGAGCCTGTATAATTCGCTCTTCCACTTCTTCTAAATCAGTTTCTGGTTCAAACATATATGGCTGAATTAAACCAGTATTTCCACTTGCCATTGTGCAGTGTTTACTGCAGTAAAAGTTGACAGAGTGAGCTGGTGTGACTGGAAGTTTTTCCATCTAATATTTATGTTTTAGTTAGCAATAATAACACTTTTATACTGTAACTATTTATTCAAAAGCTATATTGCATTGTTTACGGTTCCAACTAGGGGTGAACATTACACCATATCAGTTATTAGCCGATATTACAATTATTAAATGTATCTGTACTGTTTATTGTTTGATCCACTATCAGCTGATATTGGATTTTTAACTGTTCAAACTCATTTTCCCTGTTTTTACATTTAGTTTACCTTTGCTGTCATCTAACACTAACTTACAGTTAATCAGTTAATTTACACTAATAATTTAATAACATTTTTAGCAGATTTAATGAATATATATTTTTCATACTGTACATTATCGTGATGCCTAAATTTGGCTGTAGCATTTAGTTTTTAGTGTTTTATTTTTAATACATTTAGAGAAAATAATATAGAATTTGTAATACTGACCATAACATGAAAATAAATATTGGTTTATTGGTTTATTATTATTACAGCCATAATTTTAATATTGAGACAACCCTAATTCCACCTCAGTTTTTCTCTCAAACAAAGTTCTCCTTTACAGTGGGATTATAAACTATTTCTAAAACGGGTTGACTGAATCATTACAAAGCCCAGTCCAAATGAACAATTAATTTACTAGTGGGGCATCCCTACTGCAGATGTTGTATTACCAGCACAGAAGCTGTGGGTTGGGAAGGACCTGCTCCAGCCGACTGTACTGGCTGATGGTGAAGGTCAGCACTGGTGGACTAGGCTGGGTGGAGAAGTGTCTGGTGATCCCTGCTGGGAAAGACAGCACCATCTCACCGGTGATCTTCACCAAACACCTATTAGTGGGATCTGCTCCTTTAAAGTAGGCGCTGATGGTCTCTGTGAAGGCGGCTGCCACTGGTAGAGTGTCTTGGGGTCCCATTGTGAGAGGACTTGGACCTCTAGAACATGCTGAAATACAGAAGTAGATTGAATTTTATCTAATGGTCACACAACTTACTGAACTGAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU29011 True 1988 lncRNA 0.36 2 1728532 1730623

Neighbor


gene id symbol gene type direction distance location
CI01000004_01626984_01627238 NA coding downstream 101294 1626216 ~ 1627238 (-)
CI01000004_01605140_01622364 NA coding downstream 106168 1604552 ~ 1622364 (-)
CI01000004_01554696_01564701 NA coding downstream 163831 1554656 ~ 1564701 (-)
CI01000004_01440447_01443088 NA coding downstream 285240 1439771 ~ 1443292 (-)
CI01000004_01404265_01425424 NA coding downstream 303108 1404265 ~ 1425424 (-)
CI01000004_01758554_01762415 NA coding upstream 27799 1758422 ~ 1762415 (-)
CI01000004_01773383_01774888 INSL5B coding upstream 42305 1772928 ~ 1774942 (-)
CI01000004_01814534_01821755 CMPK1, CMPK coding upstream 83159 1813782 ~ 1821755 (-)
CI01000004_01833090_01839923 SLC35A3B, SLC35A3 coding upstream 102391 1833014 ~ 1839923 (-)
CI01000004_01853673_01854481 NA coding upstream 122565 1853188 ~ 1855232 (-)
G25690 NA non-coding downstream 36471 1691294 ~ 1692061 (-)
G25672 NA non-coding downstream 37695 1689359 ~ 1690837 (-)
G25687 NA non-coding downstream 42324 1685172 ~ 1686208 (-)
G25689 NA non-coding downstream 43893 1683373 ~ 1684639 (-)
G25688 NA non-coding downstream 46002 1681971 ~ 1682530 (-)
G25712 NA non-coding upstream 22616 1753239 ~ 1753460 (-)
G25661 NA non-coding upstream 24915 1755538 ~ 1757321 (-)
G25666 NA non-coding upstream 174690 1905313 ~ 1907541 (-)
G25744 NA non-coding upstream 179667 1910290 ~ 1910523 (-)
G25642 NA non-coding upstream 206576 1937199 ~ 1944111 (-)
G26788 NA other upstream 1543810 3267683 ~ 3275721 (-)
G27746 NA other upstream 3447604 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 3889760 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 4804204 6538904 ~ 6541252 (-)

Expression



Co-expression Network