cldn33b (LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437)


Basic Information

Item Value
gene id cldn33b
gene name LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 14126574 ~ 14128317 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241204.1
GGCAGGGCCTAAAATTTGAGTGCCCTCTCTCCCCATGTGCACATTTCCTTTACCTCTTATGCTCAGATGATGAGTGCCTCTTACTGAATACCGACGGGCTGTGAAGAACCTGCAGAAGTCTACAGTATCTGGATCCAAGGAGCTACCTCTGTtcttctcgctctctcttccATTCCTCCGTCATTCCTTCTCATCGAGAGGAGGTTCTTGAGGTGCCAACCAAACCCGAGGGCCGTCGGATCCCGAGAGAGGTGACCATGCCAAACCCATGCACTGTGTTCCTGGAAATACTTGGGGTGCTGATCGGGACGGGCGGCTGGTTTTGTTCGTTGGCGAGCACCATCATGCCTCAGTGGCTGTCACTTTCCACTGAGCTAATGGGCATGGAGAGCTACGAACAAGGGCTTTGGGAGGCTTGCGTGTTTCAGGAGGTCGCTGGTACGGAGTGTCGCCCCTACGATACCATCCTAGGCCTCGAACCCAAGCTCATGCTGGCCCGCGTTCTGATGTGCGTTTCGGATGCCACATGTCTTCTCGGACTTCTCCTCGCCATCCCCGCCATGAGTCAGATCAACTGCTGCAAGAGCGAGGAGGGACACAGGACCAAGCGAGGTTTGAAGATCACGGCCGGCGTGCTTTTATGCATCGCCGGGGTGTTCGTGCTGTTTCCCGTCTCTTACGTCGCTCACGATATTGTTATCAAGTTCTTCGACGAGACCGTACCTCACGTGGTGCCGCGTTCAGAGTTTGGAGACGCGCTGTTCATCGGCTGGGCTGCAGGACTTCTTGACATCGTGGCAGCCGTGATGTTGTTCGCCTCATGCTCCGACTCGAGAGACAGAGAACCACATTACCGTCAAAGGCAGGAGATCAGAACTATCGATGGTTCGAGAAAACGCACCGAGTACGTTTGAGGTACAATGCCTATTGATGAAGcaggacaaaaacatttttggataaTAGTTTCTTGAAAATGTTTATACTTAGATTCAGTGTATCCATCGATCAAACTCTTGAAACAGGTAAAGCATTATTAAGATGCATTATTAAGAGTAGCCTATTtgtattaatgtgttaatattGAAAAGTTGGCAATAAGTTTGCAGTTGCTTTTATAGAGATGTAGCGATtgacaacagttttttttttgccattttgtggAATTTTGATCATTCATTAAGATATTGTGTGcttaatacatatataactaGTACAGAAAAGGTAAGATTTTGGTCTTCTTCATTTGGTGCGCTGTACATTTAGTACTCAATGCCACCTGCAAAAGTACTTCTCGACAGGAAGGATGTATCCTGGCAAGTCTCCATATCTTGGCCGGCACGTCATGAGGCCACAAGTGTTTTTAGAGAGGAAGGcatgatgttttcttttcttttcttgcaaATGTATCACATGATGCTAAACTATGCATAGTGTTAATCACTGGAAGAGCACGTATGGATGTCATTGCACGTACTGCATTTATAGAAAGTCAGGTAAGATTTTAACATGAAGTGTTCTTCAAACCGTAGTTGTAATAAGTGTGTTATACTAGCGACTGTAAAAACTGAAGCCTCAGAAGGACTGGATGAGGAAGGATGCATTTCTTTCTAGAACGCAGCCTTTCCGTTTGAGACACAGCCATTGTTTGGGGATCGTTGTTTGTAAATAGCATCTGGAAATCAGCTGGTACTAATCCAGAATACTGTctgttttagtaaaaaaataaaaaagatgcttACCTGCa

Function

NR:

description
PREDICTED: putative claudin-24

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005923 bicellular tight junction cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241204.1 True 1744 mRNA 0.46 1 14126574 14128317

Neighbor

gene id symbol gene type direction distance location
lrrc7 lrrc7,LOC107709201,LOC107692363,LOC107739104 coding downstream 86411 13986047 ~ 14040163 (-)
mrpl47 LOC107659009,LOC107732024,LOC107590634,LOC107709209,LOC107692352,LOC107548661 coding downstream 433748 13691026 ~ 13692826 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107548663 coding downstream 487629 13607516 ~ 13638945 (-)
dpt dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436 coding downstream 541206 13578792 ~ 13585368 (-)
zbtb11 zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487 coding downstream 556652 13562045 ~ 13569922 (-)
lurap1 lurap1,LOC107709195,LOC107590621,LOC107692438,LOC107591165,LOC107659044 coding upstream 51555 14179872 ~ 14190329 (-)
ttc4 ttc4,LOC107659046,LOC107738930,LOC107709194,LOC107692369 coding upstream 69375 14197692 ~ 14200743 (-)
pde4ba pde4b,pde4ba,LOC107659050,LOC107692372,LOC108443455,LOC107591166,LOC105913193 coding upstream 157180 14285497 ~ 14402960 (-)
lepr LOC107709190,LOC107738956,LOC107692373,LOC107591169,LOC107659051 coding upstream 286492 14414809 ~ 14450272 (-)
dnajc6 dnajc6,LOC107659052,LOC107692374,LOC107591170,LOC107590617 coding upstream 330672 14458989 ~ 14485480 (-)
G45225 lrrc40,LOC107590628,LOC107709203 non-coding downstream 144689 13981229 ~ 13981885 (-)
G45206 NA non-coding downstream 154480 13911684 ~ 13972094 (-)
G45198 NA non-coding downstream 265129 13861235 ~ 13861445 (-)
G45197 NA non-coding downstream 265756 13860250 ~ 13860818 (-)
G45195 NA non-coding downstream 268457 13853897 ~ 13858117 (-)
G45270 LOC107692440 non-coding upstream 83049 14211366 ~ 14212986 (-)
G45271 sgip1,sgip1a,LOC107739126 non-coding upstream 86321 14214638 ~ 14216276 (-)
LOC122346673 NA non-coding upstream 135472 14263789 ~ 14279029 (-)
G45277 NA non-coding upstream 364804 14493121 ~ 14494022 (-)
LOC122346442 NA non-coding upstream 523399 14651716 ~ 14656031 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 340671 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 445280 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 1228856 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 3057108 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 3141442 10948692 ~ 10985132 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 32158 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1199266 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 1360801 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 1407069 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 1475593 15603910 ~ 15605470 (-)

Expression


Co-expression Network