mafaa (mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633)



Basic Information


Item Value
gene id mafaa
gene name mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15082218 ~ 15086566 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043241229.1
CCCCTTTCAGCGCTTCAGTGATACTGCGTGTCAGCGGTGGACAACGGTGCAAAAATAAGCTCTAGCCGTAAACGGAAAGCGACGGTGACGGCAGCCCATGTAACTTTAAAAGCGAAAGCGGAGGGAGGTGAATTTAGTAGCCGGAATCCCGCACTCTTCGTCGGGCTGCGTCGGAGCGTCCCACCAGAGGAACTTAACGTTACGCTGAGATTTGTCGAGCACGTTGTTGCGGTCTCCGTGTAAAaagcagcagaagaagaagcagcagcagcatcattCCTTTGGACTTCGAGGTAAAGTCTGTCGTTTCCTGAACTTGACCGGCGCGCGTTTGTTGTGCGAAGGACTCTTCTTGCGACACGTGAGGAAAGTTCTCGCTTTCTTCGCACGAAAGCTTAAACTTTGCTGCCTCCGGTTAGACGGGACTCGGGAGGCGAAGAAGGATATTTGAAATCTCTGTTGACTCGCAGGACGGTTTGTCTGAAACCGCGTGTCGCCTTTAACGCGCTGAAGCGAGGACGAGTCAGGTTGGTGGTTTTGAATTCACGAGTCTCGAGTTTCTGCCGCCCTGGCCAGTGATATTAACGCGTGAATTTGACCTGGGATAAGTTGTCAACAAGAGGCAAACTGGCAGGTGTATaagtacatttacatgcatgGGCATACGTATATCTCGCTGCACTATAAATAGAAGCTCGTGCTTAGGTATTAAACCCTGGGCACTCGTCTTCAGTCGTTTTCATCGTAATCCCAGCGAAACCCACGCGTGTCGCTTTGGCTGTTAGGGTAGGTGTCGTCGCATGGACTGACATGGCCACCGATCTCGCCATGAGCGCAGATTTGCCCAACAGCCCCCTGGCTATTGAATATGTCAACGACTTCGACCTCATGAAGTTTGAAGTCAAGAAAGAGCCTCCGGAGGCCGACCGCTATTGCCACCGCCTGCCCCCGGGCTCGCTATCCTCCACTCCAATCAGCACACCCTGCTCCTCGGTGCCTTCCTCGCCCAGTTTCTGTGCCCCCAGTCCCGGATCGCAGCCCGGGCAGAACCTCGGAAATGGCGTCAGCAACAACAACAgcggcaacaacaacaacaacaacaaccaaggCTCCTCGGGCAAGCCGCAGCTGGAAGATCTCTACTGGATTCCCAACTACCAGCATCACATCAGCCCGGAGGCCCTCAACCTGACGCCCGAGGACGCGGTGGAAGCGCTAATCGGCAACGcgcaccaccaccaccaccaccaccagcccTACGAGGGATACCGCGGTCAGCAGTACGTCGGAGAAGACCTCTCGACGGCCACGAACGGCCACCACCACCCGGtgcaccaccaccaccatcaccaccacGGCCACCACGCGCACGCGCGCCTCGAGGACCGCTTCTCGGACGAGCAGCTGGTGAGCATGACGGTGCGCGAGCTCAACCGGCAGCTAAGAGGCTTCAGCAAAGAAGAGGTGATCCGTCTCAAGCAGAAACGGCGAACCCTGAAGAACCGCGGCTACGCTCAGTCGTGCCGCTACAAGCGCGTGCAGCAGCGCCACATGCTCGAGAGCGAAAAGTGCACGCTTCAGAGCCAGGTGGAGCAACTCAAGCAAGACGTGGCGCGTCTGATCAAAGAGCGGGACCTGTACAAGGAGAAGTACGAGAAGCTCGCGAGCCGAACCTTTAACGGCGGCGGCAACGGAGGCGGCAACACTCGGGACCCGTCCAACGGCACTCACGGCAAAACCACTTCCACGGAATTCTTCATATACTGCACGGACCCTTCTACTTCATAACACCTCCGCTCTAAACATGGGATCACGCATAGCCTCCAAAGACCCATCAGTTTTGGATTCTGTAAAttagtggggtttttttctttctctctttagtTACACGCTAACTGCAATGTCCGACGTGTTTAAAGACACACAGCCGctttcttaatttatttcatttttatcatttgattctttttttttgtcttaacgGATCGACGAGTCTTAATGGCGATGAGAACACGCGGGAAACGGAACTTCAGCCTGTGAAGGGACTTTGCAAGGAACGACGCTAATATTAAAACGCTTACAAGCGAGAACGGGAGACAGCAATACACCCTTGACTTTTCTCGGTCGTGAACTGATGTTGAGGGGACTTGTGAACTTTTGAGGGCCCTCGAGCATTGCTCAAGTCTGCATTACCCCACCAATCCTGCATGCGGGACATGTATGGTACTCCAAACGCGccaggtctctctctctctctctctctctctctctctctctctatctctctctctcttcctcataCAGCACTTGGATGAAAAGCATGGCCCTTAACCACTCTTTCTCCtccctttttttcatttcttctgcTCGACACAGACCGTGTATGCGAAGGAACTCGCGCGTACCCGCGAAATCACACGAAAGCCGTTCTCGCATTTCTTTCCTATCGTTTAAAAgtacagaataagaaaaaaaacaccacagaacTGAGCCAGAGTTATTTATTCCCACTTGTACATATGTAGAGGTCAAATGGTGTGTTAATTTAacgttcttttttttaaaaaaaagtcctttttGCTTGATTATTTAAAACGTCTTAATACGATGTTTGTATGTAGTAGCATGCAAATGACAAAGATACTCTCATCCTATCGAATATGTACGATTTCAAAGGAAGCCTACTGCACTACGATTCGAAGAATTGGGATTTCTATAACATTTCTTTTCCTCTGTGTTAATCGAATTGCTGTTACGGTGGACATAGCTAGTCGATCTAAAGTGCATATAAACACAAGGACTTTTAATTGCTGCTAATATTCTATGCACCAAATTCGAAAGCAATTAACAGAAGCTCTGATCATGTGAATTTTgtacttcaaaataaataaaggtatgTAATATACCGGTTAGATACGGATATCAAAAATAACTAAGATCGTCTCTtcgagatttttttaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgtcttaATAACCGGGATGATGAACGACATAAAACTTCAGATATATGACAACCGTCGTTCGTAGGGCAAGAATGgttgttttaactttttatgaCATAATAAAACTGTAGCATACTCTGTATAAAGCAGTTGCCTATTGTTTTGCATTACAACATTGGGACGATAATAGGCTTCCGACCATACCGAAATACACTACAGGTAGATGTCCCGAGATTAAACGACAGCACCGGGGGGGTTTGTGTGCAAACTTTCTAATCATGCGCATTTGAGCTTGAAATATAGTCCATCTTGTTCAGGCTAAATGAAGAAGTTGCCAAAGTGGATTATCTAATGCACGTAAATTGtcttaaatcagtttttttttttaattctctccGACCTGTGTATGCTTAGTTTCCTAACAGATCTATCGGCCAGACTCCTAAAAATAAGGTCTCCCAAGTATCTGCTTGATGTCTCTCACCCGAAAACCACTGTTGacattgattaatttatttcgTTGAAATGATGAATTATGATACAGTTCGTTATGAAGCAATCTCTCTGTCTGTCGGTCTAATTTGAGGCACAGCGGCTCGGGGTTACATAACCACACGTGCTGTCACGCGTGCTGtcttatgtaaaaaaagaaataaataaaatggaaaaaaggaaaaaaaaaactgtacatagcctataatttctatatatttatcgAAATTATAAATGTCCTTACGTGTCCGTAAGTCCAAACCAAAATGTTTCGAAATGGAATGTTGTTCAGAATCTTGTTttcataatgtttaataaaaactcCTGTCAAATG

Function


symbol description
mafa Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in pronephric mesoderm; pronephric proximal convoluted tubule; pronephric proximal straight tubule; and solid lens vesicle. Human ortholog(s) of this gene implicated in Ayme-Gripp syndrome; cataract; and cataract 21 multiple types. Orthologous to human MAF (MAF bZIP transcription factor).
mafaa Enables sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in myotome; nervous system; neural tube; and somite. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human MAFA (MAF bZIP transcription factor A).

NR:

description
PREDICTED: transcription factor MafA

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K07595 MAFA; transcription factor MAFA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043241229.1 True 3837 mRNA 0.46 2 15082218 15086566
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Neighbor


gene id symbol gene type direction distance location
usp1 usp1,LOC107591200,LOC107731620 coding downstream 119646 14957029 ~ 14962572 (-)
angptl3 angptl3,LOC107704519,LOC107731634,LOC107556555,LOC107717137,LOC107692388,LOC107591184 coding downstream 153093 14924139 ~ 14929125 (-)
atg4c atg4c,LOC107704517,LOC107731653,LOC107556554,LOC107591181,LOC107692386 coding downstream 167223 14907367 ~ 14914995 (-)
foxd3 foxd3,LOC107717135,LOC107591180,LOC107731647,LOC107692383,LOC107704516 coding downstream 269594 14805304 ~ 14812624 (-)
alg6 alg6,LOC107704515,LOC107692382,LOC107591199 coding downstream 280364 14789676 ~ 14801854 (-)
LOC122346854 zc3h3,LOC107731631,LOC107556980,LOC107717141,LOC107692390,LOC107704522 coding upstream 5573 15092139 ~ 15120613 (-)
LOC122346528 LOC107731631,LOC107704508 coding upstream 58224 15144790 ~ 15148085 (-)
adcyap1r1b adcyap1r1b,LOC107731652,LOC107717143,LOC107692394,LOC107594619 coding upstream 100596 15187162 ~ 15211981 (-)
LOC122346855 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634 coding upstream 159863 15246429 ~ 15256160 (-)
LOC122346434 pars2,LOC107659014,LOC107590619,LOC107591164,LOC107709182,LOC107738922,LOC107692369 coding upstream 244670 15331236 ~ 15333933 (-)
G45355 NA non-coding downstream 176510 14905502 ~ 14905708 (-)
LOC122346442 NA non-coding downstream 426187 14651716 ~ 14656031 (-)
G45277 NA non-coding downstream 588196 14493121 ~ 14494022 (-)
LOC122346673 NA non-coding downstream 803189 14263789 ~ 14279029 (-)
G45271 sgip1,sgip1a,LOC107739126 non-coding downstream 865942 14214638 ~ 14216276 (-)
G45532 NA non-coding upstream 16124 15102690 ~ 15154616 (-)
G45543 NA non-coding upstream 98586 15185152 ~ 15239640 (-)
G45544 LOC107731621,LOC107675939,LOC107556983 non-coding upstream 146701 15233267 ~ 15745536 (-)
G45560 NA non-coding upstream 232819 15319385 ~ 15320034 (-)
G45579 NA non-coding upstream 396340 15482906 ~ 15484967 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other downstream 889052 14160475 ~ 14193166 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 1296315 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 1400924 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 2184500 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 4012752 11055035 ~ 11069466 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 241017 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 402552 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 448820 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 517344 15603910 ~ 15605470 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other upstream 669743 15756309 ~ 15765107 (-)

Expression


mafaa(mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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mafaa(mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633) Expression in each Bioproject

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mafaa(mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network