c1ql4b (c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC107748412,LOC107667333)


Basic Information

Item Value
gene id c1ql4b
gene name c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC107748412,LOC107667333
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19520291 ~ 19530863 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241260.1
CTCCTCGGGAAATCGATTTCTTGATCTGCGGAGACTGGTGCGAGTGAGCGCGAGCGCGTAATTGTGCGGAGGGCGGGGGAGCGCGCGACAGACATCCCGCGGGTGGAAGCGCCTTTTCCTCACACAAATCGAACAAGTGAGAAACTGTTGCTTCTTGGCGATGtcttaacaaaaaatattgccACATTCtacttttaattagtaatttggTCACTAAAGAATTTCGCAAGCGCCAGTAGTTATCCCTAAATAGAAGTAGCCTAAGCGTATTTAACTGTCTTGAAGAGGCAGAAAGGGTTGGAAAGAAGCAGCAAAGCAAAAAGGAGAAGACGGAAAATATTTCAATCTGACAACAGACACAGCAGAGTGACCGTTAAATAAAACCCCGAAGGCGCGAGATTCTCTGACATATTCTGAGCTGTTCGCGCACGAGAGAGGAGCTGCCGTGTCTCGCGGAGTTACCCGTCCATTTCAACTTATTAGTGAGAAACATGTCAAGATGCTAAAGGAGGTTGATCTTGGAACCTGAATATTATTCTGCCGAACTTTGATGAAGACCAGCGGGAACTGAAAATCACCCAGAGTGCTAGTTCATTCTGGCCGGGCCTGTTTCTTCTAAAGGGGAGGAGGACTTCCTCTCTATCGCTGCCTCGCGCCTCAGCCGCAGGAAGCGCGTTATTGGCGCAGCAGTGGGCGTGGCCATGGTGCTGGTGCTACTGGTCGCTATTCCGCTATTGGTCCACAGCACCAAATTGGGTGGGTCTGGAGGTGGAGGTACGCATTATGAGATGCTTGGAAGCTGCAAGATGGTCTGTGACTCTTTAACGCCCACCAATGAACTAACACCTGTTTCGCCTCCTCCTCCCGACACCCCTGGACGCAGAGGAGGAGGCAAGTCAGGTTTTCGTGGAAACCAAGGGCCAGCAGGCCCCCCGGGTCCACGTGGGCCACCTGGAGAACCAGGAAAGCCAGGTCCACCTGGACCTCCAGGTCCAGGCCCAGGGGGATACATCCCATCATTCTACAGCCCCAAAATTGCCTTCTATGCTGGTCTGCGCAAGCAACATGAGGGGAGCGAGATACTCAAGTTTGATGATGTGGTGACAAATGTAGGGAATTACTATGAGCCTACCACAGGCAAGTTCACCTGCCCTCTTCCTGGAATCTACTTCTTTACCTATCACGTGCTCATGAGGGGTGGAGATGGAACTAGCATGTGGGCTGACCTCAAGAAGAATGGACAGGTGAGGGCCAGTGCAATTGCTCAGGACGCCGATCAGAATTATGACTACGCCTCTAACAGTGTGATCCTGCATTTAGATGTGGGAGATGAAGTCTGCGTGCAGCTGGATGGCGGCAAAGTGCATGGAGGAAACACCAACAAATACAGCACATTCAGCGGCTTTCTCATCTACCCCGATTAACAAATAcaccaaatatacaaaaatataaatatacgaTCACATATTTAACACCATCACATCAGACCGAGTAATAGACAACAACAATCTGATACAAGCGATACAACATGATATAAcctcaagagaaaaaaaaaattcaaattaaccTTCAGTTACccgttttatttaaaacagcatatttaaagagaaaaatatatgcTGGCACTTAATTTTGTCCACTGGCAATTGACTTGACTCTACTTccataaaaaaatttgttttacgCATAAGCCTCAGTAAATTTAAATTCAAGTGAGAAAAAAGTATTATGACAACGAGCATTCTctaacaaacaacaacaaccaaaaaaagaatggcaaaataaatactaatttaaaaaaagtaaaaacagtgtAACTACCTGCAAAAATGGTTCTTGATAAGAAAATACTATTTGGCTTATTTTAAGCTTATTTTGGAGATGATGCAAATTATTAGAATTGGATTGAAGGATTATGTGTAGACAAacttattctttaaaataatggtcaCAGATTAATTTAACACAATAACACAATGAAATCGAAATAAGAaagtaaatatgatttattcagATTTGATTTGACACTTGGTATTGACTTGTATTGCTAACAGCCATCTTGGTCTGATCACGGTGTATTTGCTACCTTTAATGCAATTCCCTTTGAGAAACTTGAGAAATATGTAGAATGggtctttgttgtttttaattttgtttttttttttgagcccACCAATGGTGAGCAAAATatgaattagaatttttttaatgtaaattccctaaatcacagtgtcaggctCTTTTCCAATTAACACCATTACAATATGTTGTGTGCAATGCTCATCCATTAGGGTAAAAAGAGAACTACCTGCAATCATCTTCTTGTATTTTACTAGATTACCATTCTCCCTCTGCaccatatgtatgtatgtgcataacTTGGAAAAGACTGTATGCATATCACGGCATGGAAACTGTATGTTTTAGCCTTTATGTCTACTAAGTATGTACACAGTGTTTATACTGGAGGAACTTTGAGATTATTgtgaaattataaattataattatacctCTCTGTAATGCCACAAAACATTCTTTAGGATTGGTTAGTGGactaaacatttaaagtgacCTGATCCATCTGTAATCTGAAGACATCCAGTTTatctgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgagtgcatgtgcgtgtgcgcgtgtgtatgtgtgtgtgcatgtatcaGCAATGTATGTGATACACATGTGTGTCCATATCAGTATAAAGTGTAAGAAAATTTGCTTCTAAATATTTGACTTGTAGATTGATTGCTGTTGTAAAGCCTTGCAGTTgtgtaattaatcattattatagACTTTTATTCTGGCATGTTAAAGACTacatgctgtaaataaaaaaataaaaataaacaaa
>XM_043241261.1
gtcactttttttgTCACAGACGTCTTTTGTGACATTATTCCACGTAGcatatttgatttgtttgttgctgacgttggattttttttatatatcgaaaaacaatttattttttgcacattccTCAGACACAAGCCACGTTTCTTCATACCTTACTCCTTTGTTAACTTTTCTATCTCACCTTAGCGCTTTTTCCTTCCCAGAGTTCATTCTGGCCGGGCCTGTTTCTTCTAAAGGGGAGGAGGACTTCCTCTCTATCGCTGCCTCGCGCCTCAGCCGCAGGAAGCGCGTTATTGGCGCAGCAGTGGGCGTGGCCATGGTGCTGGTGCTACTGGTCGCTATTCCGCTATTGGTCCACAGCACCAAATTGGGTGGGTCTGGAGGTGGAGGTACGCATTATGAGATGCTTGGAAGCTGCAAGATGGTCTGTGACTCTTTAACGCCCACCAATGAACTAACACCTGTTTCGCCTCCTCCTCCCGACACCCCTGGACGCAGAGGAGGAGGCAAGTCAGGTTTTCGTGGAAACCAAGGGCCAGCAGGCCCCCCGGGTCCACGTGGGCCACCTGGAGAACCAGGAAAGCCAGGTCCACCTGGACCTCCAGGTCCAGGCCCAGGGGGATACATCCCATCATTCTACAGCCCCAAAATTGCCTTCTATGCTGGTCTGCGCAAGCAACATGAGGGGAGCGAGATACTCAAGTTTGATGATGTGGTGACAAATGTAGGGAATTACTATGAGCCTACCACAGGCAAGTTCACCTGCCCTCTTCCTGGAATCTACTTCTTTACCTATCACGTGCTCATGAGGGGTGGAGATGGAACTAGCATGTGGGCTGACCTCAAGAAGAATGGACAGGTGAGGGCCAGTGCAATTGCTCAGGACGCCGATCAGAATTATGACTACGCCTCTAACAGTGTGATCCTGCATTTAGATGTGGGAGATGAAGTCTGCGTGCAGCTGGATGGCGGCAAAGTGCATGGAGGAAACACCAACAAATACAGCACATTCAGCGGCTTTCTCATCTACCCCGATTAACAAATAcaccaaatatacaaaaatataaatatacgaTCACATATTTAACACCATCACATCAGACCGAGTAATAGACAACAACAATCTGATACAAGCGATACAACATGATATAAcctcaagagaaaaaaaaaattcaaattaaccTTCAGTTACccgttttatttaaaacagcatatttaaagagaaaaatatatgcTGGCACTTAATTTTGTCCACTGGCAATTGACTTGACTCTACTTccataaaaaaatttgttttacgCATAAGCCTCAGTAAATTTAAATTCAAGTGAGAAAAAAGTATTATGACAACGAGCATTCTctaacaaacaacaacaaccaaaaaaagaatggcaaaataaatactaatttaaaaaaagtaaaaacagtgtAACTACCTGCAAAAATGGTTCTTGATAAGAAAATACTATTTGGCTTATTTTAAGCTTATTTTGGAGATGATGCAAATTATTAGAATTGGATTGAAGGATTATGTGTAGACAAacttattctttaaaataatggtcaCAGATTAATTTAACACAATAACACAATGAAATCGAAATAAGAaagtaaatatgatttattcagATTTGATTTGACACTTGGTATTGACTTGTATTGCTAACAGCCATCTTGGTCTGATCACGGTGTATTTGCTACCTTTAATGCAATTCCCTTTGAGAAACTTGAGAAATATGTAGAATGggtctttgttgtttttaattttgtttttttttttgagcccACCAATGGTGAGCAAAATatgaattagaatttttttaatgtaaattccctaaatcacagtgtcaggctCTTTTCCAATTAACACCATTACAATATGTTGTGTGCAATGCTCATCCATTAGGGTAAAAAGAGAACTACCTGCAATCATCTTCTTGTATTTTACTAGATTACCATTCTCCCTCTGCaccatatgtatgtatgtgcataacTTGGAAAAGACTGTATGCATATCACGGCATGGAAACTGTATGTTTTAGCCTTTATGTCTACTAAGTATGTACACAGTGTTTATACTGGAGGAACTTTGAGATTATTgtgaaattataaattataattatacctCTCTGTAATGCCACAAAACATTCTTTAGGATTGGTTAGTGGactaaacatttaaagtgacCTGATCCATCTGTAATCTGAAGACATCCAGTTTatctgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgagtgcatgtgcgtgtgcgcgtgtgtatgtgtgtgtgcatgtatcaGCAATGTATGTGATACACATGTGTGTCCATATCAGTATAAAGTGTAAGAAAATTTGCTTCTAAATATTTGACTTGTAGATTGATTGCTGTTGTAAAGCCTTGCAGTTgtgtaattaatcattattatagACTTTTATTCTGGCATGTTAAAGACTacatgctgtaaataaaaaaataaaaataaacaaa

Function

symbol description
c1ql4b Is expressed in habenula. Orthologous to human C1QL4 (complement C1q like 4).

NR:

description
PREDICTED: complement C1q-like protein 4

GO: NA

KEGG:

id description
K23284 C1QL; C1q-related factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241260.1 True 2894 mRNA 0.41 4 19520291 19530863
XM_043241261.1 False 2506 mRNA 0.40 2 19522046 19530863

Neighbor

gene id symbol gene type direction distance location
LOC122346461 LOC107711020,LOC107667380,LOC107740572,LOC107585130,LOC107673452,LOC107711000,LOC107580767 coding upstream 121850 19396637 ~ 19398441 (+)
LOC122346460 mettl7a,LOC107585130,LOC107711020,LOC107667380,LOC107740572,LOC107673452,LOC107711000,LOC107580767 coding upstream 124936 19393452 ~ 19395355 (+)
krt18b zgc:77517,LOC107585131,LOC107673602,LOC107711062,LOC107733602,LOC107667394,LOC107582704 coding upstream 187767 19328519 ~ 19332524 (+)
si:dkey-195m11.11 NA coding upstream 222526 19292646 ~ 19297765 (+)
ankrd33ab LOC107711022,LOC107582706,LOC107585135,LOC107667328 coding upstream 229424 19288427 ~ 19290867 (+)
smarcc2 smarcc2,LOC107711050,LOC107667400,LOC107748388,LOC107582794,LOC107673598 coding downstream 1471 19532334 ~ 19545874 (+)
endou endou coding downstream 25989 19556852 ~ 19560337 (+)
slc4a8 LOC107711038,LOC107673578,LOC107667363,LOC107585109 coding downstream 217980 19748843 ~ 19770878 (+)
LOC122347196 NA coding downstream 241029 19771892 ~ 19774436 (+)
zgc:152986 LOC107585105,LOC107711036,LOC107673557 coding downstream 269803 19800666 ~ 19802004 (+)
LOC122346499 NA non-coding upstream 9884 19509472 ~ 19510407 (+)
G46399 NA non-coding upstream 32855 19486694 ~ 19487436 (+)
G46362 NA non-coding upstream 57195 19437749 ~ 19463096 (+)
G46347 NA non-coding upstream 65926 19385606 ~ 19454365 (+)
G46355 NA non-coding upstream 110803 19408748 ~ 19409488 (+)
G46364 tsfm,LOC107711018,LOC107585120 non-coding downstream 22456 19553319 ~ 19554169 (+)
G46577 NA non-coding downstream 72226 19603089 ~ 19603602 (+)
G46579 NA non-coding downstream 77686 19608549 ~ 19609353 (+)
G46569 ip6k2b,LOC108272042,LOC107667389,LOC107748392,LOC103024783,LOC107673575,LOC107585112 non-coding downstream 103873 19634736 ~ 19637968 (+)
G46608 NA non-coding downstream 166310 19697173 ~ 19704039 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other upstream 172662 19262584 ~ 19347629 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other upstream 903333 18577178 ~ 18616958 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other upstream 1354049 18156655 ~ 18166242 (+)
G46022 NA other upstream 1523574 17995191 ~ 17996717 (+)
G45894 NA other upstream 2332983 17186708 ~ 17187308 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other downstream 35148 19566011 ~ 19594008 (+)
ghrl LOC107585199,LOC107711011,LOC107673481 other downstream 253314 19784177 ~ 19786297 (+)
LOC122347202 uqcc2,cf125,LOC107580205,LOC108440614,LOC107667355,LOC106565356 other downstream 312184 19843047 ~ 19846548 (+)
slc6a11a slc6a11a,LOC108440580,LOC107673588 other downstream 335696 19866559 ~ 19873535 (+)
G46742 NA other downstream 556228 20087091 ~ 20095641 (+)

Expression


Co-expression Network