rgs16 (rgs16,LOC107684360,LOC107711030,LOC107551031,LOC107732438,LOC107564088,LOC107685341)


Basic Information

Item Value
gene id rgs16
gene name rgs16,LOC107684360,LOC107711030,LOC107551031,LOC107732438,LOC107564088,LOC107685341
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16807611 ~ 16809797 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241263.1
GCTCTGCTTCCTGCTCTATATAAACCCTCTCTTCCCTCACTGCAGACACACTGCTGATAAATTTCACCTAGAGATCACGCTGCGCAATGGATATTTATTTCCCTTCTGGCTTTCCAATGTGTAGAGGAATAACAGGGCTCTCAAACAATTGCCTAGAAAGGGCCAAAAGATTAAAGGCATGCGTGGGTGGATTTCTGCAGAGACAAGACTTGAGCAGCCTATGTAAATATAGAAAACCAAGGTTGACCTTGGAGGAATGTCTGATGTGGAAACAGTCTTTTGAGAAGCTTCTGTCCAGCAAACATGGACTGTATGCCTTCAGAGCTTTCCTGGTATCTGAGTTTAGTGAAGAAAACATTGCTTTCTACCTGGCCTGTGAGGACTACAAGAGCACAAAGTCTGCAGCTAAGATGCCATCCAAAGCCAAGAGGATCTACGAGGAGTTTATCGGAAGTGAAGCTCCAAGAGAGGTTAACATCGATTACGAGACTAGAGACATTACTCAAGCCAACTTGAAAAGCCCTACGGCATCCTGCTTCGATATGGCCCAGTACCGCATCTACATTCTCATGGAAAAGGACTGTTACCCACGATTCCTGCGCTCCGCTGCCTACCGGAATCTAGTCAACCAGCTCACAGTGAAGAGCGCTAAGGCAAGAAGCAAAAGGGCCATTGCCGCCAGACCACCAACTGAAGATGAAGAACCGAAATGAAAAACGTAGATGCATTTTGGTTCTGCAATAGGTGGAAGCTCGGGCAAGAAGTGGAAGGGACCGCTGCAGACCCTAAAAAGGCTGCTTGAGGTGGTCTTGAGTGCCATGAAGAGACGAAGAGAAGAGCATCACGGAATCAGATTGACTGCATTCCCAGATCCCCTTAATAGTGTCCATGAGAGGGAACGGAAGAGCTGCTGGCGAAGAGAGATGCATCTGCACAAACACCTGTAACTCAACACAAAGGAGATACAGACTTTACTGAAGCATGCATGAGCTTAAAAGCACATAGCATACTTTTGAAAACAATTTATGTGTTTTGTAAACTTTATACAATGAAGAAAAGTGTTtggatatttaatgcattaatttatttaatttatttaaatcctttttttatataaatcacCCCTTACAAATATGATGGTAAACAGGTGgtatcttatttaaaaaataaataaataaacaaaataatattattaaaatcgtCACGAAAAAGACAAACctttgattaattaattcaacCTTTTGAAATGGAATCTTTTTAAAGATATTGACAATCTGTCTGGACTGAGATATAAGGCTTAAGAATGTCGGTGTACtatgtattttattgatttttttatatatgtttttgttaactaaattttaaatgaaagtgaatcaattttttgcattaaagtgaTAATGTGCTttca

Function

symbol description
rgs16 Orthologous to human RGS16 (regulator of G protein signaling 16).

NR:

description
PREDICTED: regulator of G-protein signaling 5

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241263.1 True 1411 mRNA 0.40 5 16807611 16809797

Neighbor

gene id symbol gene type direction distance location
rgs5a rgs5a,LOC107684230,LOC107732440,LOC107564083,LOC107685321,LOC108441543 coding downstream 11459 16788677 ~ 16796152 (-)
nos1apa nos1ap,LOC107711121,LOC107594625 coding downstream 43337 16687378 ~ 16764274 (-)
LOC122346973 LOC107551033,LOC107711121,LOC107684213,LOC107732445,LOC107692421,LOC107594625 coding downstream 124178 16676285 ~ 16683433 (-)
uap1 uap1,LOC107724142,LOC107551035,LOC107692418 coding downstream 147878 16649465 ~ 16659733 (-)
ddr2a ddr2,ddr2a,LOC107724144,LOC107551036,LOC107594601 coding downstream 159996 16618572 ~ 16647615 (-)
brinp3a.1 brinp3a.1,LOC107585174,LOC107711117,LOC107732447,LOC107685317,LOC107564080 coding upstream 88888 16898685 ~ 16926368 (-)
LOC122347243 LOC107551033,LOC107711121,LOC107684213,LOC107732445,LOC107692421,LOC107594625 coding upstream 408190 17217987 ~ 17224910 (-)
LOC122346427 her6,LOC107680502,LOC107722674,LOC107711114,LOC107582845,LOC107685314 coding upstream 743706 17553503 ~ 17555239 (-)
LOC122346430 her6,LOC107680502,LOC107722674,LOC107711114,LOC107582845,LOC107685314 coding upstream 858390 17668187 ~ 17669843 (-)
LOC122347583 LOC107711009 coding upstream 1184173 17993970 ~ 17996739 (-)
G45770 NA non-coding downstream 484806 16320413 ~ 16322805 (-)
G45753 NA non-coding downstream 536503 16270902 ~ 16271108 (-)
G45752 NA non-coding downstream 538219 16268915 ~ 16269392 (-)
G45751 NA non-coding downstream 540069 16267183 ~ 16267542 (-)
G45709 NA non-coding downstream 689025 15902216 ~ 16118586 (-)
G45897 NA non-coding upstream 377659 17187456 ~ 17187794 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding upstream 704841 17514638 ~ 17518605 (-)
G45993 NA non-coding upstream 997824 17807621 ~ 17808115 (-)
G46000 NA non-coding upstream 1012739 17822536 ~ 17822735 (-)
LOC122346731 nit2,LOC107585165,LOC107673472,LOC107582734,LOC107685305 non-coding upstream 1230567 18040364 ~ 18044630 (-)
fam183a fam183a,LOC107551015 other downstream 443591 16361167 ~ 16364020 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other downstream 747145 16059893 ~ 16060466 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other downstream 747844 16058968 ~ 16059767 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 1042504 15756309 ~ 15765107 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other downstream 1202141 15603910 ~ 15605470 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 6843 16816640 ~ 16830261 (-)
G45895 NA other upstream 376892 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 425993 17235790 ~ 17246386 (-)
G45910 NA other upstream 498018 17307815 ~ 17308478 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other upstream 572530 17382327 ~ 17414139 (-)

Expression


Co-expression Network