dpt (dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436)


Basic Information

Item Value
gene id dpt
gene name dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13578792 ~ 13585368 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241276.1
AAGCCCAATTCCTGACCATAACCATCTGGTTATGGTGAAAATTATCACCCCTGGATCCGGACACAGAACATCTGGACAGCACATCCCAGAAAGCCTTTAAGACGAAGGAAGCATTGAGAAGTTTCACAGAGTTTGACTTCAGGATGAGCTCAGCACATGTTCTGCAGGCTCTGTGCCTGCTGATGGTTTTCTGCACAGCCAACGCTCAGAACGGCTACATGTATGATACCGGTGAGGAGTGGGTGAATACCTGGCGCCAAGGCTTCAACTTTCAGTGTCCCCATGGTGAAGTCTTAGTGGCGATCAGGAGTTACTTCAGTGAAAAGGAAGGCTCGGACCGCCTGTGGAACTTTGAATGCCAGAGGACTCCTTATGACTGGGGAGAGCCCAACGAATGCTGGTGGGACGATATCAACAGAGCCGGGCTGGAATGGTCCTCGGTTTGCACTAACAATGGGCTGGTTGCTGGAGTGCAAAGTAAGTATTTTGAAGCAGTTCTGGATCGAGAATGGCAATTCTACTGCTGTCGATATGCCCGCAGGTGCCCATATTCCTGCTGGAAGACGAATGATGTTCCCGAGTACCCCAGAGAAGAGGGAGAGATGGTAGTGCCCAGTTACGGCTACTTTATAAGGGGGGCTCAAACTACTTTCAGTGGTGTATTGAGGGATCGGCAGTGGAAGTATATCTTGTGCCGAATGACAGACTTTGATTGTCAGTTTGAAAACTTCTAGACTGCATTCCTCACTTCTATGCTAGAAAAGAGCACAATGCTCACCACCACATAAGCACTTATAATAGCACTCACTGAAAACATACGCCatactcatttttttattcGCTTCACAGCttagaaatatttgatttgctTTGTATAAGCCTGCATGGATTgctatgttttcatattttgcagtcatttctgttatttctatgtttacaaatattttgtaaccatttttaaaatataaatgacaaaaaaacattatttttcctttttttaattttttttttttacaaatttgattATGATCTCCAATGCATTCTTGAATGGTTGTTGAAAAAGTCCAAAATATTCCTATTTTTTAAGTCTCAAATATGGAGTAACGAAACATACCGAACTCTTTGGAAAATGGGCGGAACTAATAAAGCAAAGG

Function

symbol description
dpt Predicted to be involved in collagen fibril organization. Predicted to be located in extracellular region. Is expressed in several structures, including central nervous system; digestive system; eye; fin; and heart. Orthologous to human DPT (dermatopontin).

NR:

description
dermatopontin

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241276.1 True 1154 mRNA 0.42 4 13578792 13585368

Neighbor

gene id symbol gene type direction distance location
zbtb11 zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487 coding downstream 8870 13562045 ~ 13569922 (-)
dipk1ab fam69a,fam69ab,LOC107590645,LOC107659006,LOC107566484 coding downstream 17767 13543207 ~ 13561025 (-)
evi5b evi5,LOC107590647,LOC107692341,LOC107566483 coding downstream 43352 13496135 ~ 13535440 (-)
gfi1ab gfi1,gfi1ab,LOC107659005,LOC107590681,LOC107692343,LOC107566482 coding downstream 83196 13489950 ~ 13495596 (-)
glmnb glmnb,LOC107659021,LOC107692340,LOC107590673,LOC107731827 coding downstream 99881 13471896 ~ 13478911 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107548663 coding upstream 22148 13607516 ~ 13638945 (-)
mrpl47 LOC107659009,LOC107732024,LOC107590634,LOC107709209,LOC107692352,LOC107548661 coding upstream 105658 13691026 ~ 13692826 (-)
lrrc7 lrrc7,LOC107709201,LOC107692363,LOC107739104 coding upstream 400679 13986047 ~ 14040163 (-)
cldn33b LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 coding upstream 541206 14126574 ~ 14128317 (-)
lurap1 lurap1,LOC107709195,LOC107590621,LOC107692438,LOC107591165,LOC107659044 coding upstream 594504 14179872 ~ 14190329 (-)
G44942 NA non-coding downstream 221271 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 224009 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 224612 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 225142 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 225723 13352462 ~ 13353069 (-)
G45036 NA non-coding upstream 107970 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 112131 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 238304 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 251937 13837305 ~ 13837538 (-)
G45064 NA non-coding upstream 257366 13842734 ~ 13848641 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 681074 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2509326 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2593660 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2743267 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 69892 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 132834 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 575107 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1742215 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 1903750 15489118 ~ 15490685 (-)

Expression


Co-expression Network