LOC122346577 (atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287)



Basic Information


Item Value
gene id LOC122346577
gene name atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18799892 ~ 19048806 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043241304.1
AGCATCTTCAGCTactaaagggggaaaaaaagatgccGCTGTAAAACTTTTCAGGGCTAACGTGAGAAAGGGAGAGGATTGACGCGATGGGTGAAGACGATAAAACAGAGTGAGGAACTTTTCTTACGGCCCTTCGCCATCAAGGAGGATCAGCATGATTACATAGATACCATCTTTTATTGGTTCAAGAAAAGAGACAAAAGTTTTGGGCGAAGTATGGCGCGAGAGACCGGAGAGTCTGGAGAAACGAAAAGTACCAAAGtgaaaaagcataaaagaaggaaaagcaaaaaggaGAGCAAAACCCGGATTGTACACGCCAACATTTTGTATGACCATACCAAAGGAGGGGATAACCCCAACAGACACTATGCAAACAATAAGATCAAAACCACAAAATACACTCTGCTTTCTTTCCTACCGAAGAACCTCTTCGAGCAGTTCCACCGATTTGCCAACgtgtattttgttttcatagccTTACTGAATTTCGTGCCTGTGGTCAACGCTTTTCAACCAGAGTTGGCTCGCCctgtggtttttattttgtccGTTACCGCTATTAAGGATTTATGGGAAGATTACAGACGACACCGCTCggataaagaaataaatcatttggaCTGTCTCGTTTACTGCAGGAGTGAGAAACGATATGTGGAGAAATACTGGAAAGAGGTGCGGGTCGGAGACTTCATTCGTCTGCGATGCAACGAGATCCTGCCGGCGGATGTTCTCCTGCTCAGCAGCAGCGACCCAGACCGACTGTGTCACATTGAGACGGCCACACTGGACGGGGAAACCAACCTCAAGCAGAGGCAGGTGGTGCGCAGCTTTATCGACCTGGACTGCGAGTTTGACCCATTAAAATACAACAGTGTTATTGAATGTGAGAAGCCCAACAATGACCTCAACAGATTTCGTGGGTACATAATCCATCGCAGTGGAAAGAGAGACTGCCTGTACAAAGACAATCTGCTGCTCAGGGGCTGCACCATCCGCAACACAGAGGAGGCTGTAGGAATCGTCATCTATGCAGGTCATGAAACAAAAGCAATGCTGAACAACAATGGCCCTCGTTATAAACGCAGCAAACTGGAGCGGCAGATGAACGTAGATGTGTTCTGGTGCGTCATCATCCTCCTGGTCATGTGCCTCTTTTCTGCCATTGGACATGGCCTGTGGATGTTCCAGTATGGAGATAAGAGGCCTGTCTTTGACGTCCTGAGCCCAGAAGGAACCAACTTATCTCCAGTGGTCTCAGCCATTTATCTCTTCCTGACCATGATTATAGTATTGCAGGTGCTGATCCCAATCTCGCTCTTTGTTTCCATTGAAATAGTGAAGATATGCCAGGTGTACTTTATACATCAGGACATGGAGCTGTACGATGAGGAAACAGACTCTCACCTCCAATGCAGGGCTCTGAACATCACAGAGGACCTGGGCCAAATGCAGTACATTTTCTCTGATAAGACCGGCACGCTCACGGAAAACAAGATGGTGTTTCGCCGTTGCACTGTGGCAGGAGTCGAGTACTCTCATGATGCCAACGCGAGGAGGCTTGCTATGTACCAGGAAATGGACTCGGAGGAGGAGGACTGTACATCTCATGGTGGAACTCTCCCTCGCCGGGACAGCGTCACCAGCCACCAGAGTGGAAAAGTGGTATTGCGATCACAGAGCACTAAATCTCACCGTCGTACTGGGAGCAGAGCCGAAGCCAAACGAGCCAGCATCCTGTCCAAACACACTGCCTTCAGCAGTCCCATGGAAAAGGACATTACTCCAGATCCCCAGCTCATGGATAAAGTCAATGAGTGCAGCAGCCAGATGGAGTTCATGCGTTTTCATAGTCAGCCCCTGAATCAGATCCCCCCTGACCTGTGTGACGTCTTTGATTTTTTCATTGCTCTCACTATCTGCAATACTGTGGTTGTGTCCTCACCCAATCAGCCCCGGCAGAAGGTGCGTCGCTACGAGTTGAAGTCTCCAGTGAAGACCATCGAGGACTTCATCAAGCGCTTCACTCCGAGCCGCCTGACCTCTGGCTCCAACAGCAGCAGCTCATCCAGTCTGGCCACCAACCGCTCGTCCTCCCATAAAGTGGGCTGCAGCATGCTGTCCTCCCCCTCGGCTGAGAGCACGCTCACCAAGCTGAACGAGGAAAAACGTCCGGAGCATGACCTGCAGCATGCCTTCAGCCCCGTCCCGCACAACTTCGATAAAACAAAAGCTTTGGCTCAAGATGAATGCGAGCTCAGATATGAAGCGGAGTCACCGGACGAGGCTGCACTGGTTTATGCAGCCCGGGCCTATAAGTGTGCTCTTGTCGGTCGTTTGCCAGATCAGGTGACCGTGGAGCTTCCACACTTGGGCAAGTTGAGTTTCGAACTTCTGCACACACTGGGGTTCGACTCCACAAGAAAGAGGATGTCAGTGGTGGTGAAACACCCTTTGACTGAGCAAATCACCGTCTACACCAAGGGTGCCGATTCAGTCATCATGGATTTGATCAGACCAGCCACAGATGATTGCAAAGGAAAGCGACAAAGAAAAATCTTGTATAAAACTCAAAACTACTTAAATCTTTATGCTGCAGACGGTCTCAGGGCGCTCTGTATCGCCAAaaagGTTGTCAGTAAGGAGGAGTATGCCAGTTGGCTACAGCTCCACCTGGAAGCCGAGACAGCCATACAGAGGAGAGAGGAGTTGCTTTTTGATTCTGCATTACGACTAGAGACCAACCTCCAACTTTTGGGAGCAACAGGTATTGAGGACAGACTTCAGGATGGGGTTCCCGAGACCATCGCCTCTCTGAGGAAAGCAGGCCTTCAGATCTGGGTGCTGACAGGAGATAAACAAGAGACTGCCATCAACATCGCCTATGCCTGCAAACTGCTGGACCCAGAGGAAGAGATAATCACTCTTAATGCTGACTCACAGGAGGCCTGTGCTGTATTGCTCGAGAACAGTCTGCACTACATCCAGGCCAAGTTCCTTTGCAACCCACGACCAGATAGAGACTACGCTGACATCCACTTCTCTTCTCCGGTGTGTTCCCCGGCTTCCTCTGGTCACTCCAGCCCGTTCCTGGTGCATCGGCTAGGGCTGGTGATCGACGGTCGAACCTTGGCCTACGCACTGGACAAGAGTTTGGAGGACAAGTTCCTGGCCGTGGCTCGAAGTTGCAGGTCCGTTCTATGCTGTCGCTCGACGCCCCTGCAGAAGAGCATGGTGGTCAAGTTAGTGCGGAACAAGCTCAAGGTCATGACTCTGGCAATAGGTGACGGAGCAAATGATGTTAGTATGATCCAAGTGGCAGACGTAGGGGTTGGGATCTCTGGACAGGAGGGCATGCAGGCGGTGATGGCCAGTGACTTTGCCCTGCCACGATTTAGTTACCTGCAGAAGCTGCTCTTGGTTCACGGCCATTGGTGTTACTCTCGTCTAGCCAACATGATCTTATACTTCTTCTACAAAAATGCTATGTTCGTTGCCCTCATCTTCTGGTATCAGTTCTACTGCGGGTTCTCTGGGTCAGCCATGGTTGATCAGTGGTACCTGATCTTCTTCAACCTGATGTTCTCCGCATTCCCTCAGCTCATCACCGGCACCCTGGACAAAGATGTGTCAGCAGAAACCCTGCAGGAGTTGCCGCAGCTCTACATGAATGGACAAAACTCAGAGGAATATAAACCCTACATGTTCTGGATGAACATGATTGATGCCTTCTACCAAAGCCTCATCTGTTTCTTCATCCCTTACTTTGCTTACGTTGACTCTGATGTGGATTTGTTTACATGGGGCACTCCCATCACCACCTTGGCACTCTTCACCATTTTGCTGCACTTAGGCATAGAAACCAAAACCTGgACGTGGATGAACTGGGTGTCGATTGGCTTCAGTATAGCTCTCTTCTTTACTGTGGCGCTGTGCTACAATGCTTCCTGCccaacctgtttctctccctccAACACTTATTGGACCATGCAGAGGCTGCTGGGAGACCCTGTGTTTTACATTCTGTGTGTTGTCACACCTATTGCCGCTCTTCTTCCcagATACTTTTATAGGGCTTGTCAGGGAACTCTATTCCCAAACCCTGTCCACGTGGGAAGACAACTGGACAAACTGCCAGTGGACATGCGCAGGATCTTCCTGAGCCAGAGCCAGATGAAGCTGGGCTCCCTCGGGTCACTGTTTCCCCCCCGTGCTCCATTTTTCCCTCTCTGCAGGCCCTTTCAGAAAGACTACAGGCCCAGGGTAAAGCAAGCCCACATGAGTAGCACCAAACAGAAGGAGAAAGCTATATCCAGCCCCATCCCATCAAAAAGCACGGAGATGCGGGACACGCCTTTAAGCTCAAAAAACTCTGACAACCATATCACACTCAACCTCAGAATGCAGGAAAAAGCTCCATCCTGCAGACAGGGCTCGGGCGGCCCTCTATCTGAGAACTTACACTGCATAAAGGAACCTTCGAGTCCCGCTGCAGGCACTCTGCCGTACACCAAAGACACTCCGGCCTCCAGGACTATTTTGGATAGCACAGGCTTGGAGGCCCCGCTGAGCCCGACAGACCTCTGTCCGGTCGGGCTGCTCACCTCCACTCCCTTGCTTCCTCAGGCAGAGACTATGCAACTCACAGCGCCAGTCAGCTTTTTTTGTGGGCAAAAGCTGGAAGACGAGGACCATTCAAACCAAAAGTCCCTGCTGAAACAGGCCAGGGATGTGGATCACAAGCAGTCAACTAGCTGCCTACAAGAACATTCactcaaaacaacatttctatGATGCTTTCTACCTGTTACGCTCATTCAAATTTGCAcgttagctttaaaaaaaagtgttattatatattcaatattattttatgaaagaTATAGGTTGGTACtacgtatataaatatatatttttagatgtataaagtttagtttttgttttttgagagaGAGGCCAACATATGCAAACTGGATGGCCTTATGATTAATgactgactttttatttttgttttcttctttttgttttttgttttttttttaaacatctcaaAAGTGGAGGAGGTTTGTATCTCGATGCAGAGGCAGTCCAGAGACATTccttttatctgtttatttgaaCCTGGATGTTCTGGTGCACTTTAAAGAACTTCCTGTCCTACCATTAGACACTGCTGATAGCACTACACGCGTATTTCCCCATCccagaacaaaaaaatcatctaGCCCTTCAGAGTCAGTAGCTACAGGAATTTTGGTAACGCTTTACGAAAGTGTACATGAAGTCCTAAACGATTAAAGGCATGAACTAATCAAGAATTAATAATGTGCGAGAGGAGTCAGCAACAAAACTACTTTTACATCATGCTAGTGAATATTTGTTGTGACCTCACGTTCACTTAAATCAAACGATTTCTATTACAAAGAATGTGATGTGGCAAAACCTGCTCTGACTTTCATTAAACGTGCATGATTGTAATGCCTGAATAACATTCGCTTCACATCTACCGCTTTAAGAACATTATTGGATAATCAcactttatcatttaaatgaataatccTATTTATAATCTAATTGGGGCTTTTTTGTTACTTCGAATTCTTTGTCATACAGCTAATCGAATGCCTTAACTATCAAACATGTATTTAAAGTGGCCATTATTCACATGATTCCAGCCATATCTCATGCTAGCGCTTAATTGGTTCTTGATTAGTCTGTGAGTTCATTCCTCATTAGTTAAACTATTTGTTCAAGTAATAATGCATGATTTATGTACCCTATTTGTAAAGTATTGGTGGAATTCCTTAAATATTCGGTGAATTGTTGTTAGATCCCCTGACGATCTTAATTAGTGCTGAGCAAGAGATGCACTCTACACTTGTTGATGCTGTCTGAAGGACTATGCATGACGTTGTACTCTATTGTGTTCCATTATTGAAGCTCTTAGACATCTGCCAGAGTAAAATGTCATCTCACAAATCTCACACCATCATCAATACTGGCTTACTAGAGTCAACTGTACTCCATTGAGCTATTCATGCATATAGGAATGCTTCTTATGGCAGGTTCCTGCTCAAGtatttgactttttctttcttttttgctgcTGCTTTTGTTTCTAAACACGTTCCTGCAGGATAGgattttacttttgctttttatatatatatgtgtctatatatatatatatatacatatatatatacatatagttcTATTCATTCAGTCATAGCGAAATGTGCTTTAAGAAATAGAGGCAGATGCATCAAGCTAATTTGACAGTTAAGGAGCAGAAAAGTGCGAACAGAAAGGTCACTTTCCACCATTTGTTTTAGGACGGTTTCCCACCTGATCTGTTGAGATATACAGTATGTGCGTCTTCTGCTATTTGCTATGATTGTATTTTTCTGCTGTTTATTATGTACGTGATCAAAGACCAAAGATGCAAGAAGCACAGTGCTGGAGCATTTGTACTGTAACCGATCACTTTATTAATTAGCAATTCAGTGGGCTACTCTATTAAAAGGATATTTTGGCCAAAATGAccccttttttattatttacttgctTTTGTATCATTCCAAACCGGTTTGAATTTCATCTGTTTAACACAAAATAACTTCCATGCAATTAAAGTCAATGGGACTTTCACTgcatgcacaatttttttttttttggtattctGCAGAAGTAAGTCATATTGGTTTGGAATGTTATTGAGGGTGAGTACATAATGATAGAAATgccatttttggctgaactgtcACTAAGTGTCTTCACCGCTTAAGTTTGTATTCCCAAACCGGGCCTATTTTATCGTGACAGGAATCATGTATTGTATGCATTAGTGTCTCGCTCGCCCTCACGATCCCCCACAATACATTCATGAAAACGGCCCGTTCTAAGGGAATCGGACTAGTCTGTGACTTTGACTTCTCATAGTTTTAAAGCTGTAATATGTGTAATGAAAGGTTCTGAAGAACACATGGGTGGTTATCCGTTTGTTCCGCAAGACAATATTCCACAGTTCCGCAAATGTCAGGGGTGTGGCGTATTATAGAGTCCCCTAGAGAGAtgctaaaatagtttttatgagATGATTTGTCATGCTGTGCTCGCATAACCTCAAGGCCTCGCCAATCTGTTCGTTCGGGATCTCATTTGGGCAGTCGCTATCAAAACCGCTGATTTATGAACAGCCTACCAGGAGGATTATGAGATCTATTGTGCTCATTACACAACGAATGGTGTGAACAGAATGCGctcagaccaaaaaaaaaaacaggggtGTTACGTTAGCATCTCGATGGTAGTTTCCTGTCATTCATGAACTAATTCTTTCTGTATGTGTCTGGATACTATAGTAAAACCCTAAAGAAGCTAATATAAAGCACACAAGTACTTTGTCCCTTCGGTTTTTCTTCTGCACAGCTCAGGTTCAGCGTTCGCCACTTGGAGCAATATTTTCGTCTCTTCGAAAGTGTAATGTTTATAGCACccgaagcttttttttttttatttccatagtTTGTTAAAGGCAACGTTTATATGTGCTGAAGAGCTTTAGTATGCGCAAGAAAACAGTTTTATATGATGTGGAATATATATTATGTGCCTTAACACTGGAGATCGCATTTGTAGACCGCAATACATACAGTGAATTTTATAGATGTGCAGTATATGTAAAAGGTATTTGgagttatattaataaatgaggtttgataaaacaaaatccttttggttttttaacaaattgtgaaattatgctgtatttttgttctccggactatatttgtttgttgttttagaaTGGAATGTGCCAGTACTTGGATCCCAGGTTTCAGGTCTGTCAGGTTCTTGGCCGAGCATCACATGCTGTAATAGAATCCATTCACAGCTGCATTCCAGAGCCTTTCCTTAACTTCAGGGCAGATCACCAGCGGGAATGCCGTCCTTCAGAGTTGGTCATAGCACACGTGTAATCGTTGGGTGGACTTTTTGATACCcagcatgacttttttttttatcactgtcACTGCCATGACTGTTTCTGGCTCATTGTACTGTAATTGGTGTTTGTTGTAGTCACACAAAGGTTCGGTTTGTTCTCGCTGTACACTCGCTATGTTGCCAGCCCTTCATGAAAACACCCGTTTCGAGTGGTTCTCTGACATTTTGGAGGGGTTTGTTAAATTGTTCGAtcgttttgtgtttgtttcttgaCAAAGAACAATTCTTTA

Function


symbol description
atp10a Predicted to enable ATPase-coupled intramembrane lipid transporter activity. Predicted to be involved in phospholipid translocation. Predicted to act upstream of or within phospholipid transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human ATP10A (ATPase phospholipid transporting 10A (putative)).

NR:

description
PREDICTED: probable phospholipid-transporting ATPase VA

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0006812 cation transport biological_process
GO:0045332 phospholipid translocation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0019829 ATPase-coupled cation transmembrane transporter activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01530 E7.6.2.1; phospholipid-translocating ATPase

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043241304.1 True 8243 mRNA 0.45 25 18799892 19048806

Neighbor


gene id symbol gene type direction distance location
LOC122347579 LOC107678225,LOC107752101,LOC107581302 coding upstream 37114 18759996 ~ 18762778 (+)
gabrb3 gabrb3,LOC107711086,LOC107673538,LOC107585149,LOC107685288,LOC107582723,LOC107733605 coding upstream 268458 18488910 ~ 18531434 (+)
oca2 oca2,LOC107716962 coding upstream 466617 18255522 ~ 18333275 (+)
herc2 herc2,LOC107716961 coding upstream 544801 18208798 ~ 18255091 (+)
cyfip1 cyfip1,LOC107673532,LOC107716963,LOC107685293 coding upstream 601698 18166896 ~ 18198194 (+)
ube3a ube3a,LOC107711083,LOC107582722,LOC107585142 coding downstream 12952 19061758 ~ 19071270 (+)
stk35l stk35l,LOC107711082,LOC107585147,LOC107673595,LOC107733606,LOC107685285,LOC105016730 coding downstream 38859 19087665 ~ 19096644 (+)
bin2b bin2b,LOC107673593,LOC107711079,LOC107685284,LOC107585145,LOC107582721,LOC107733580 coding downstream 52412 19101218 ~ 19108709 (+)
slc48a1b slc48a1b,LOC107585148,LOC107711080,LOC107733581,LOC107685336,LOC108441111 coding downstream 61382 19110188 ~ 19113563 (+)
LOC122347294 LOC107711002,LOC107585140,LOC107733596,LOC107733594,LOC107667370,LOC107667371,LOC107711003,LOC107585181,LOC107582832,LOC107667300 coding downstream 143282 19192088 ~ 19205784 (+)
G46223 NA non-coding upstream 79546 18718281 ~ 18720346 (+)
G46220 sec23b non-coding upstream 82398 18716029 ~ 18717494 (+)
G46222 NA non-coding upstream 89524 18699623 ~ 18710368 (+)
G46216 NA non-coding upstream 92277 18646191 ~ 18707615 (+)
G46275 NA non-coding downstream 6410 19055216 ~ 19056131 (+)
G46272 LOC107585146,LOC107711077,LOC107673565,LOC107733590,LOC107667372,LOC107582718 non-coding downstream 69246 19118052 ~ 19133603 (+)
trnaq-uug_14 NA non-coding downstream 103296 19152102 ~ 19152173 (+)
G46265 NA non-coding downstream 172486 19221292 ~ 19223286 (+)
G46305 NA non-coding downstream 180990 19229796 ~ 19230441 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other upstream 182934 18577178 ~ 18616958 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other upstream 633650 18156655 ~ 18166242 (+)
G46022 NA other upstream 803175 17995191 ~ 17996717 (+)
G45894 NA other upstream 1612584 17186708 ~ 17187308 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other upstream 3233224 15564981 ~ 15566668 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other downstream 213778 19262584 ~ 19347629 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other downstream 517205 19566011 ~ 19594008 (+)
ghrl LOC107585199,LOC107711011,LOC107673481 other downstream 735371 19784177 ~ 19786297 (+)
LOC122347202 uqcc2,cf125,LOC107580205,LOC108440614,LOC107667355,LOC106565356 other downstream 794241 19843047 ~ 19846548 (+)
slc6a11a slc6a11a,LOC108440580,LOC107673588 other downstream 817753 19866559 ~ 19873535 (+)

Expression



Co-expression Network