LOC122346580 (kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198)


Basic Information

Item Value
gene id LOC122346580
gene name kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18982130 ~ 18985288 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241305.1
GGGCATGGAAGGTTGAGCATGCTCTCTCCCAGTGTTTACTGTTAGGCACAAGGCAGCCAGCGTGTTTGTGTCGAGTTTGGGTAATGGACGAATTGTTGCCTGAAGGCAGACACCACGGGAAGCCAGAGATCTGATACAACATTTGAAGGACCTCCAGGATGTATTTAGGTTAATAGTAACActagtttaaaaaagaaaacaaaacaaaatggattTGAGAGCCAAGCACGGTTTGACGCTGTTGGAACAGCTAAATCGAATGCGGGATGCTGAGCAGTTAACAGATGTGGTTCTAGTCGCTGAAGGTGTTAGCTTCCCATGCCACCGTGCGGTGCTTTCTGCCTTCAGTCCCTACTTCCGTGTAATGTTCACCTGTGGCCTGCGAGAGTGTACCAACCGTCAGGTGGTGTTAAGAGACATGCCAGCCCCAAGCCTAGCCCTTCTGCTGGAATATATGTACAGCTCCAATCTTCCACTCACTGCAGCCAATGTGCAGGGAATCTCTGTTGCCGCATTTCTTCTACAGATGGATGATGTTTTCAGTCGTTGTCATATCTACATGATTGACAACATGGATGCTTCCAATTGCCTgggcatttattattatgctcGTGATCTAGGGGCAGAAGAGTTGGCCGACCAGGCTCAGCACTATCTACGACAGCACTTCACTGAAGTGTGCCTTGGAGAGGAAGTGCTGGAGTTGGAGGCACACCAGTTAGGGGCTGTATTGGGCTCAGATGATCTCAATATTTCACGGGAAGAGAGCATTTTGGATGTGGTGATGCGCTGGGTGAATTACCGTCCAGGGGCTATAGGCTCAGAGGAAGAGAACCGGCGGCACCTTCCAGAGCTCTTGAAGAAGGTACGTCTTCCACTGGTGGGTGCAGATTACTTGAAGGGGACTTTAAAACGGAACACGGCTCTTCTAGCTGATGCCGAATGTCTTCAGATAATGGAGGAGGCAGTTGAAGCAGCGAGATTGGATTCAGATGCTCCACCTCGTCGACTGAAGCTGCGTTATGGCATGGAGACCACAGACCTCCTGCTCTGCATTGGTAATGATGGAGGAGGCATTCGCTCACGTTACGGAAGCTACACAGAGCGTAGCTTTTGTTATGCTCCCAAAACAGGACGGACACTTTTCATCACCTCTCCGAGATATGGTGATGCACTTGGATATGTCTTTGCTGGGGTAGTGACTGAGAGGAATGACATTATTGTTGCAGGAGAGCTGGGAGCAAGAAGGATGtcaagacagaaagaaagaaatgtcgAGATTTTCATGTACAACAAGGAAGCCCAAGGATCTTGGAAACACTTGAGCTCAGCAGAGTATCGTGATTCTTATGCTTTAGGCTCTTTGGGAGAAAACCTCTACCTGATTGGTGGtcaaatgaagctgaaaaacCAGTTCCTCATCACCAACAGTGTTGAGCGTTGGTGTCTACAGGGTGGACCATGGCGTAGCGCTGCCCCTCTGCCCATGCCACTGGCCTATCACAGCATAGTTCGGATGAAGGGCCGGCTGTATGTACTTGGAGGACGGACTCCACAGTCGTACCGCACAGATGACGAGCCTGACCGTATGAGTAATCGTCTGCTTGAATACGACCCAGAAACCAACAAGTGGAGTGAACTGAGCCctatgaaatattcaaaataccGTTGCAGTGCAGTCACACTCAATGGGGAAATCTATGTACTAGGTGGTATTGGGTGCGAAGGTGTGGATCGTGGCCAATCACGTCATTGCCTTAATGTAGTGGAGATCTACAACCCTGATGGTGATTTCTGGAGGGATGGTCCACCTTTACCATGGCCTCTTCTATCACTTCGCAGCAATGCATCAAATGCTGGGGTTGTTGATGGAAAACTTTATGTCTGCGGATACTACAAAGGAGCAgATCGTCACGATACCATTACTAAAGACATCCTGCAGTTGGATCCCTGGGAAAATGTTTGGACTGTGGTAGCAAAGCAGGCTCTGATGCACGACAGTTATGATGTGTGCTTGGTGGCAAATCTGAATCCTCGTGGACTGATGCCCCCTCCTGCTGACTTGGTAGAGGAATGA

Function

symbol description
kbtbd12 Is expressed in myotome. Orthologous to human KBTBD12 (kelch repeat and BTB domain containing 12).

NR:

description
PREDICTED: kelch repeat and BTB domain-containing protein 12 isoform X1

GO: NA

KEGG:

id description
K21912 KBTBD12; kelch repeat and BTB domain-containing protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241305.1 True 2077 mRNA 0.49 7 18982130 18985288

Neighbor

gene id symbol gene type direction distance location
LOC122346586 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 coding upstream 7108 18968907 ~ 18975022 (+)
LOC122346576 myhb,LOC107721187,LOC107568178,LOC107667337,LOC108254796,LOC108443910,LOC108271865 coding upstream 14229 18952387 ~ 18967901 (+)
LOC122347579 LOC107678225,LOC107752101,LOC107581302 coding upstream 219352 18759996 ~ 18762778 (+)
gabrb3 gabrb3,LOC107711086,LOC107673538,LOC107585149,LOC107685288,LOC107582723,LOC107733605 coding upstream 450696 18488910 ~ 18531434 (+)
oca2 oca2,LOC107716962 coding upstream 648855 18255522 ~ 18333275 (+)
ube3a ube3a,LOC107711083,LOC107582722,LOC107585142 coding downstream 76470 19061758 ~ 19071270 (+)
stk35l stk35l,LOC107711082,LOC107585147,LOC107673595,LOC107733606,LOC107685285,LOC105016730 coding downstream 102377 19087665 ~ 19096644 (+)
bin2b bin2b,LOC107673593,LOC107711079,LOC107685284,LOC107585145,LOC107582721,LOC107733580 coding downstream 115930 19101218 ~ 19108709 (+)
slc48a1b slc48a1b,LOC107585148,LOC107711080,LOC107733581,LOC107685336,LOC108441111 coding downstream 124900 19110188 ~ 19113563 (+)
LOC122347294 LOC107711002,LOC107585140,LOC107733596,LOC107733594,LOC107667370,LOC107667371,LOC107711003,LOC107585181,LOC107582832,LOC107667300 coding downstream 206800 19192088 ~ 19205784 (+)
G46252 NA non-coding upstream 20735 18957330 ~ 18961395 (+)
LOC122346587 NA non-coding upstream 44242 18936732 ~ 18937888 (+)
G46242 NA non-coding upstream 95659 18882800 ~ 18886471 (+)
G46240 NA non-coding upstream 115290 18864092 ~ 18866840 (+)
G46237 NA non-coding upstream 123659 18851200 ~ 18858471 (+)
G46260 LOC107673608,LOC107712089,LOC107584440,LOC107568175 non-coding downstream 4304 18989592 ~ 18993546 (+)
G46261 NA non-coding downstream 10050 18995338 ~ 18996420 (+)
G46275 NA non-coding downstream 69928 19055216 ~ 19056131 (+)
G46272 LOC107585146,LOC107711077,LOC107673565,LOC107733590,LOC107667372,LOC107582718 non-coding downstream 132764 19118052 ~ 19133603 (+)
trnaq-uug_14 NA non-coding downstream 166814 19152102 ~ 19152173 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other upstream 365172 18577178 ~ 18616958 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other upstream 815888 18156655 ~ 18166242 (+)
G46022 NA other upstream 985413 17995191 ~ 17996717 (+)
G45894 NA other upstream 1794822 17186708 ~ 17187308 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other upstream 3415462 15564981 ~ 15566668 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other downstream 277296 19262584 ~ 19347629 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other downstream 580723 19566011 ~ 19594008 (+)
ghrl LOC107585199,LOC107711011,LOC107673481 other downstream 798889 19784177 ~ 19786297 (+)
LOC122347202 uqcc2,cf125,LOC107580205,LOC108440614,LOC107667355,LOC106565356 other downstream 857759 19843047 ~ 19846548 (+)
slc6a11a slc6a11a,LOC108440580,LOC107673588 other downstream 881271 19866559 ~ 19873535 (+)

Expression


Co-expression Network