zgc:103559 (zgc:103559,LOC107752646,LOC107696750,LOC107552265,LOC107733245,LOC108427664)


Basic Information

Item Value
gene id zgc:103559
gene name zgc:103559,LOC107752646,LOC107696750,LOC107552265,LOC107733245,LOC108427664
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 12088224 ~ 12094740 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241350.1
TCTTCTAAAAAGAAATTGCTTTTTTGTTAGCAATCTAAATGGTACAGGTCAAAGAACCTTTATCTTTCTGCTGACACTCACGTAAAGATCAATGAACGAGGTGCATTGACCTTGAAAGTGAAAGCTTTTGCTGCGAGGACGGTGAAAGACAGAAGCTCATATAGGCTGCATAAGACACACCGAAGACATGGAGCCAGGATCGACTGTCGGTGTTGTGAGGAGCCAGAGGGTTTTGTGTGGAGAGGAAATTCGACCCGCGGTTATCATAATAAAGGAAGGAAAGATTCATAGCATTCTGCCAGATTCAGAAGCTACAGCGCACACAGCTGGAAAGGTAGTGGATGTGGGGAACAGTCTGATAATGCCAGGTATAGTGGACTGTCACGTGCATGTTAATGAACCTGGCCGGACCTCCTGGGAAGGGTACTGGACCGCCACACGAGCAGCTGCTGCTGGAGGAGTCACCACTATCGTAGACATGCCTCTAAACAGCATCCCACCCACTACGACTCTTAGAAACTTTCATGAGAAGCTGCATGCTGCTACAGGACAGTGTTTTGTAGACACGGCATTTTGGGGAGGAGTCATTCCTGGAAACAAGCTGGAGCTGAGGCCGATGGTTCACGCCGGCGTTGCTGGATTTAAGTGCTTTCTGATTCACAGCGGGGTGGATGAGTTTCCTCATGTGAGCGACGCTGATCTGCATGCAGCTATGAAACAGCTCCAGGGCACAGGCAGCGTTCTGCTGTTTCATGCAGAGAAAGAAGTCCAGCATGCAGCTGCTGAGAAAGGGGATCCACAAGAATATTCCACCTTCCTAAAGACCAGGCCTGACATTATGGAGCTCGAGGCCATCCGTACCGTCACTCAGCTCTGCTTACAATATCAAGTAAGATGCCACATTGTGCATCTGTCATCAGCCCAGCCTCTGGAGCTCATTAGGGCAGCAAGAAAGGCTGGAGCTCCACTGACTGTAGAGAGCACCCATCACTACCTCAGCCTGTGTGCAGAGGACATTCCAGCACGTGCAACTCAGTTTAAATGCTGCCCCCCGATACGAGACACAGCCAACCGGgAGCTCCTATGGTCTGCACTCAAAGCTGGTGATATTGATATGGTTGTGTCCGATCATTCGCCATGCACACCTGACCTAAAGTGTTTAAACAGTGGTGATTTCACACAGGCGTGGGGAGGGATCTCTTCTCTGCAGTTTGGTTTATCTTTGTTCTGGACATCAGCTTCTAAAAGAGGGTTTTCATTTTTCGACGCAGTAAGACTCTTGTGTAAAGAGCCTGCTCAACTCTGTCGCCTTGACGACCGAAAAGGGAGTCTCGTTCCAGGTCACGATGCAGACTTAGTCATCTGGGATCCAGAAAAAGAGTTTACGGTGAACGAAGATAACATACATCACAAAAACAAGttaaCACCGTACCTTGGTCTTGTTCTGCGAGGGAGGGTGAAGGCCACTGTAGTCCGCGGGAAGGTGGTTTATAGTCATGGCTCTTTCAGTTCTCAGCCTCTGGGAAAGCATCTCTTTATCCAGCACCAGACACCATCCTCTTTGTAAACTAAGCACATTAAGCACATTACATTATCTCATATTACTTAGCATTATCAGCATgtgttacagtaaaaatggtGCCGTGTGGCATGTAATTTTAGagtataatttatgtaattgaTTGTGAAGTAGTGTGGTATATTGAAAAATGGATTGGGTAACACTTTGcacaaataatgtaaacaaacagtaactactactactactaaattaaactattttaatgggAAAGTCCTtccaaaaaagaacattttgttattatttactatatttgtatattatttacatttcaaacccatatgactttctttcttttttctatggAAGAtaaaagaagttattttaaataaagatcagTTATGTCTTGGAGCTTTTGGATCACGTTATTAAGCTGATTTCTGAACCAATTAAAATTTCTTAGACGCCCAAAATACAGAGTTTACACAATagtatgcattaaaatatgaatgtgatgaatttttgtttatgtgttaattaataataagttAACATAATTTGGTTAATAAACATGCTCTACTTTATATGTAAGTTTCTTCAGGAAATAATAGAAGTAACTAATGTTTAACCCAGgttaaaaaattgtgattttaaagtttaaagtgaatgatttacatgtaaaaatacattattaataa

Function

symbol description
zgc:103559 Predicted to enable allantoinase activity. Predicted to be involved in purine nucleobase catabolic process. Predicted to act upstream of or within allantoin catabolic process. Predicted to be active in cytoplasm. Is expressed in liver.

NR:

description
PREDICTED: allantoinase, mitochondrial-like

GO:

id name namespace
GO:0000256 allantoin catabolic process biological_process
GO:0050897 cobalt ion binding molecular_function
GO:0004038 allantoinase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01466 allB; allantoinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241350.1 True 2217 mRNA 0.42 11 12088224 12094740

Neighbor

gene id symbol gene type direction distance location
agxta agxta,agxt,LOC107696749,LOC107552266,LOC108427662 coding downstream 631 12084281 ~ 12087593 (-)
dtymk dtymk,LOC107593168,LOC107694123,LOC107696762,LOC107552279 coding downstream 4684 12081977 ~ 12083540 (-)
stk25a LOC107733254,LOC107593165,LOC107694119,LOC107696758 coding downstream 25806 12055892 ~ 12062418 (-)
hdlbpa hdlbp,hdlbpa,LOC107694132,LOC107696756 coding downstream 89729 11973465 ~ 11998495 (-)
trnap-ugg_4 NA coding downstream 115444 11972709 ~ 11972780 (-)
LOC122346505 sox14,LOC107679857,LOC107756185,LOC107713406,LOC107694108,LOC103365676 coding upstream 168179 12262919 ~ 12264713 (-)
im:7152348 LOC107717945,LOC107694124,LOC107590683,LOC107752641,LOC107696753,LOC107552260 coding upstream 872360 12967100 ~ 12970628 (-)
trnap-ugg_5 NA coding upstream 876343 12971083 ~ 12971154 (-)
trnap-cgg_1 NA coding upstream 876738 12971478 ~ 12971549 (-)
bcl6aa bcl6,LOC107717934,LOC107752633 coding upstream 991360 13086100 ~ 13109224 (-)
G44501 NA non-coding downstream 659461 11428125 ~ 11428763 (-)
G44460 NA non-coding downstream 845718 11242277 ~ 11242506 (-)
G44459 NA non-coding downstream 846192 11241637 ~ 11242032 (-)
G44457 NA non-coding downstream 848760 11239119 ~ 11239464 (-)
G44452 NA non-coding downstream 850026 11237962 ~ 11238198 (-)
G44705 NA non-coding upstream 55094 12149834 ~ 12437749 (-)
G44730 LOC107552274,LOC107593170,LOC107694117,LOC107696767,LOC107753639 non-coding upstream 429216 12523956 ~ 12525300 (-)
G44737 NA non-coding upstream 501106 12595846 ~ 12965513 (-)
LOC122347051 tmem131,LOC107659030,LOC107692350,LOC107732007,LOC107548642 non-coding upstream 633391 12728131 ~ 12730973 (-)
G44773 NA non-coding upstream 795976 12890716 ~ 12891336 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 1018758 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 1103092 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 1252699 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other downstream 1371483 10710045 ~ 10716741 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other downstream 1579221 10434204 ~ 10509003 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other upstream 431016 12525756 ~ 12897718 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 1560520 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 1623462 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 2065735 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 3232843 15327583 ~ 15330851 (-)

Expression


Co-expression Network