boka (boka,bok,LOC107733256,LOC107752647,LOC107696759,LOC107694130)


Basic Information

Item Value
gene id boka
gene name boka,bok,LOC107733256,LOC107752647,LOC107696759,LOC107694130
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 12065298 ~ 12074564 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241355.1
agatagatagatagatagatagatagatagatagatagatggatagatggatggatggatgttcgTTTTCTAAGTTTGTTCTCTGCTTCATCAGATCTCATAGAGGCGGACTATCAAAGCCATAACAGATCTGCTTATCTCCGCCTCAACGGAGAGCTTCTCCATAGAAGGACACTTCATGTGTGCAACTCATCCAGACAGACCAAAGACAGCACTGCCTCCTGACACACTTCACCTCACCAATCTGTAGACAGAATTATATCCGCTCATTAAAAATGTCGATATTTCCGGGGATTTCGATGAATTTCGGGACACGGCGAAGGTAACCGCCCGCCGGTTCTCTGCTCTCTTGTTGGGTTCTCGTTTATCCAGCGGGAGGTGAGAGCGAGTCTCTTCTACACACAGTAAAGCGCGCCAGTTTCCTTCTTTCTGCGGATCGTTTAGGGCGCCGTCAGAACAGAAGAGGGTGGAGAAGAAACGCTTCCATACACGGCGATAAAGGTGGAGGTTGTCAGCTGATTGTAATTGATCTGCGCTGATCATGAAGGGCATCGAGATGTTGCGCCGCTCCTCGGTGTTCGCGGCTGAAGTCATGGAGGTGTTTGATCGCTCTCCCACGGATAAGGAGCTCGTGTCTCAGTCTAAAGTCTTGTGCAGGGATTACATCCACTCCAGACTCCATCGGGCTGGGATCGGATGGTCTAAACCGGAGCACGCATCCGGAGGGACGCTGGCGGAGGTGTCTTCGGTTCTTCTGTGGCTGGGTGATGAGCTGGAGTACCTGCGACCCAATGTGTATCGCAATGTAGCAAGACAGCTCAACATCACGATTGCCTCTGAGAGTATAGTCTCCGATGCCTTTTTGGCCGTTGCTGCAGAAATCTTCTCTACAGGTGTGACGTGGGGGAAGATTGTGTCTCTGTATGCTGTGGCCGGAGCTCTAGCTGTGGACTGTGTTCGGCACGGCCAGCCGGCGATGGTGCACACTATTGTCGACTGCATGGGCGAGTTTGTTCGCAAAAGCCTTGTGTCATGGTTAAAGAGGAGAGGAGGTTGGGCGGACATCACAAAGTGTGTGGTCAATACAGATCCCAGTTTCCGTTCTCATTGGCTGGTGGCAGCTGCCTGTGCCTGCGGTCACTACCTCAAGGCCGTGGTCTTCTACCTgctgagagaaaaataaagagcAGCACAAACAAGTGACGGACAGCTGGACTCTTCCAAAAACTGGCAGAAGAGGTTTCTAGTCACTGCTTAAGCCTTTCACTGCTCTAGATGCGTTTACACTTGCACAAAGTTTGCACTTTTCCTTTAAAGGATATTCTTGCTCTCCGAGATGAACCGTTATGTGTTTAACCTGGCCTCTTGCACTCTAGGCATTCCTCGCTGTTACCAATTTTATTGAACCTAATGTTGATATGCAAAATACCATGGCCGGCGGGACATAGCTGAGAGGAAGTTATCGTGACCTTTGTATTTTCGCGTGAAATACAATGTACTCGGGCCAGTGCTGCCTCGACCAATGTTGTCTGATCAGAACGTTTCTCTGattgtaattgtattattcACTGTCTCGAGTAGTTTTGATGATCTCAAAATGCTAAATGTCCACATTGCAGTATGAAAAATGACCAGGAGTTCATGAGAAAACGGACCTACAAGAAATGGAGATTAAATTCTTGTATTTCTCAAGGGAAAACTCCAAACTACTGTATGCAAATAACCGTGGAAGAGTGAAAAGAAAGTAGATTATGGTTGACTAATATTGAAAAATAGACGTAACATTTCGGGTCATGCCATaattcaagaacatgtcaattAGCATTTCATGGTGTTGTCTCCcttctttgtaatttattttgtttttctgtctaaTATTTTCCTCAAATCTTGTATTTGATGTTGTTGGTGCCATCTTGAACAACTGTAAGATATCATGGAGCCCTCAGTATAATAACTTAAAACTTGGTGTTTTATAACTGTTTGTTTCATTACTTTGTTTTCTTGTATAGtggtttataataataataataataataataataataataataatactataatatatgtatacatatacatatacacacacacaaaaattataaacagaaaatgcattttctctgCTTTACTCCAGGTTGGAAAAAccattaacataataataaagccTTCATGCTGATAATTGTGTAAGACATTAGTATAATTGGTGGAAAGCGAGTGGGAGGATGGCGTTTAGATCAGATAATATAGTTAGAGATATTGTTACTATGGTGATCACTCTTAACATGTGGTTTCATTTACCTTCAACCAGGCTAATAAACTGGACTTTgagaacaaaa

Function

symbol description
boka Predicted to enable protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in extrinsic apoptotic signaling pathway in absence of ligand and intrinsic apoptotic signaling pathway in response to DNA damage. Predicted to act upstream of or within apoptotic process and regulation of apoptotic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrial outer membrane. Is expressed in brain; eye; gut; heart; and pleuroperitoneal region. Orthologous to human BOK (BCL2 family apoptosis regulator BOK).
bok Predicted to enable protein heterodimerization activity and protein homodimerization activity. Involved in several processes, including activation of cysteine-type endopeptidase activity involved in apoptotic process; apoptotic signaling pathway; and regulation of apoptotic process. Located in several cellular components, including Golgi apparatus; endoplasmic reticulum membrane; and mitochondrial inner membrane.

NR:

description
bcl-2-related ovarian killer protein

GO:

id name namespace
GO:0043065 positive regulation of apoptotic process biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K02561 BOK; Bcl-2-related ovarian killer protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241355.1 True 2339 mRNA 0.43 4 12065298 12074564

Neighbor

gene id symbol gene type direction distance location
farp2 farp2,LOC107694112,LOC107696757 coding upstream 10288 12011095 ~ 12055010 (+)
trnai-aau_2 NA coding upstream 92254 11972971 ~ 11973044 (+)
dzip1l LOC107679858,LOC107756183,LOC107593178,LOC107751311,LOC107577891 coding upstream 263502 11791670 ~ 11801796 (+)
LOC122346915 kyat3,ccbl2,si:ch73-97h19.2,LOC107698888,LOC100332215 coding upstream 617371 11442111 ~ 11447927 (+)
barhl2 barhl2,LOC107675428,LOC107678352,LOC107555373,LOC107564632 coding upstream 806731 11254609 ~ 11258567 (+)
atg4b atg4b,LOC107696761,LOC107552278,LOC107593167,LOC107694120 coding downstream 886 12075450 ~ 12082028 (+)
kif1aa kif1aa,kif1a,LOC107696745,LOC107694128,LOC107552277,LOC108427666,LOC107593169 coding downstream 23116 12097680 ~ 12152964 (+)
LOC122346457 scly,LOC107552249,LOC107552250,LOC107752645 coding downstream 364536 12439100 ~ 12444241 (+)
LOC122346426 klhl30,LOC107753621,LOC107694118,LOC107696751,LOC107752665,LOC107593185 coding downstream 389978 12464542 ~ 12469417 (+)
LOC122347050 tmem131,LOC107659030,LOC107692350 coding downstream 630081 12704645 ~ 12731083 (+)
G44575 hdlbp,LOC107733253,LOC107694132,LOC107552253,LOC107696756,LOC107752661 non-coding upstream 71161 11993558 ~ 11994137 (+)
G44574 hdlbpa,hdlbp,LOC107752661,LOC107694132,LOC107733253,LOC107696756 non-coding upstream 87887 11937101 ~ 11977411 (+)
LOC122347449 NA non-coding upstream 359372 11689692 ~ 11705926 (+)
G44521 NA non-coding upstream 421600 11641081 ~ 11643698 (+)
G44483 NA non-coding upstream 636468 11427845 ~ 11428830 (+)
G44604 NA non-coding downstream 402560 12477124 ~ 12482182 (+)
G44606 LOC107593190,LOC107696746,LOC107552261,LOC107753661,LOC107694109,LOC107752664 non-coding downstream 418389 12492953 ~ 12493642 (+)
G44611 NA non-coding downstream 489528 12564092 ~ 12671665 (+)
G44622 NA non-coding downstream 590256 12664820 ~ 12699577 (+)
G44615 NA non-coding downstream 1008816 13083380 ~ 13084230 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other upstream 54759 12002147 ~ 12010539 (+)
G44478 LOC107749977,LOC107730703,LOC107675437,LOC107564626,LOC107698886,LOC107555394 other upstream 644968 11415273 ~ 11420330 (+)
pik3r6a zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457 other upstream 1172838 10882960 ~ 10892460 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other upstream 1182399 10870378 ~ 10882899 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other upstream 1941773 10116617 ~ 10123525 (+)
G44588 NA other downstream 12835 12087399 ~ 12092455 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other downstream 79704 12154268 ~ 12159899 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other downstream 447209 12521773 ~ 12526957 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other downstream 691257 12765821 ~ 12805700 (+)
smx5 lsm2,LSM2,smx5 other downstream 1006001 13080565 ~ 13082119 (+)

Expression


Co-expression Network