Gene
RNA
| Item | Value |
|---|---|
| gene id | G25324 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 1956642 ~ 1957261 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU28559 | True | 620 | lncRNA | 0.32 | 1 | 1956642 | 1957261 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_01937296_01943730 | AP2M1, AP2M1.L, AP2M1A, AP2M1B | coding | upstream | 12912 | 1937296 ~ 1943730 (+) |
| CI01000004_01917089_01920203 | NA | coding | upstream | 35937 | 1915626 ~ 1920705 (+) |
| CI01000004_01883020_01908403 | ABI1B, ABI1 | coding | upstream | 48008 | 1883020 ~ 1908634 (+) |
| CI01000004_01867166_01868986 | C7H1ORF21 | coding | upstream | 87656 | 1867166 ~ 1868986 (+) |
| CI01000004_01855598_01856473 | IMP3.L, IMP3 | coding | upstream | 100118 | 1855351 ~ 1856524 (+) |
| CI01000004_01961480_01979407 | DVL3A | coding | downstream | 2794 | 1960055 ~ 1979465 (+) |
| CI01000004_01999847_02001406 | NA | coding | downstream | 42586 | 1999847 ~ 2002779 (+) |
| CI01000004_02004004_02012588 | NA | coding | downstream | 45610 | 2002871 ~ 2013414 (+) |
| CI01000004_02014703_02018248 | NA | coding | downstream | 57339 | 2014600 ~ 2018466 (+) |
| CI01000004_02033826_02057420 | TSC22D2 | coding | downstream | 75742 | 2033003 ~ 2057653 (+) |
| G25345 | NA | non-coding | upstream | 150 | 1956142 ~ 1956492 (+) |
| G25344 | NA | non-coding | upstream | 1037 | 1955385 ~ 1955605 (+) |
| G25337 | NA | non-coding | upstream | 6509 | 1945926 ~ 1950133 (+) |
| G25254 | NA | non-coding | upstream | 185938 | 1770395 ~ 1770704 (+) |
| G25253 | NA | non-coding | upstream | 186465 | 1769825 ~ 1770177 (+) |
| G25297 | NA | non-coding | downstream | 21469 | 1978730 ~ 2027792 (+) |
| CI01000004_02068075_02072887 | NA | non-coding | downstream | 116017 | 2067958 ~ 2074081 (+) |
| G25332 | NA | non-coding | downstream | 117658 | 2074919 ~ 2081442 (+) |
| G25358 | NA | non-coding | downstream | 128498 | 2085759 ~ 2122591 (+) |
| G25187 | NA | other | upstream | 340172 | 1604542 ~ 1616470 (+) |
| CI01000004_01332533_01345585 | SCP2 | other | upstream | 608468 | 1331583 ~ 1346008 (+) |
| CI01000004_00467911_00469949 | AGRP2 | other | upstream | 1484796 | 467802 ~ 471846 (+) |
| G25329 | NA | other | downstream | 125796 | 2083057 ~ 2085707 (+) |
| G25882 | NA | other | downstream | 590814 | 2548075 ~ 2573049 (+) |
| G25992 | NA | other | downstream | 779275 | 2736536 ~ 2736768 (+) |
| CI01000004_02745885_02768971 | NA | other | downstream | 801195 | 2745885 ~ 2769135 (+) |
| G26245 | NA | other | downstream | 1551756 | 3509017 ~ 3522393 (+) |
