ephx4 (ephx4,LOC107555389,LOC107564433,LOC107678348,LOC107730701,LOC107749983,LOC107675432)


Basic Information

Item Value
gene id ephx4
gene name ephx4,LOC107555389,LOC107564433,LOC107678348,LOC107730701,LOC107749983,LOC107675432
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 11042046 ~ 11054847 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241426.1
gtcacggtttccacaatagcatttatatataatgcacttATCTAAatagcacttttaaaaataatgtctgcTTTCAAAACTTGGCATGGAAATATGTTttaacaccaaatcagcatattgataCTGAAActttagctttgccatcatacGATAATAAATACGTTGTGCAGTACATGAAAACGAGTTATTCGTATAAACCGTATGTTTCACAGCATTACCGTTTTTTACTacatttgaatcaaataaatgcagccttcgtAAAGAAACCATTAAAACGTTTTACTTTTCAAGACCAGGCTATTCTTTTTGAACAAGGGTAAACTTCCGAGTTTGCATGAAATTCAGTGATGTTTTGTGATATTAAATAGCGTGCTTTATTCGAAACAAACGTTGGCagtttatatacaatttttaatatagttGAGAGTTTTCAAAACTGTCGCGACGCTTTCGTATAGCTAAGTTCCAACTTGTTTAGCTCTAATGAATAGGCAAAAACTTACACGCCTGCGTCCAAAAGTTATTTAATCCCCATTTCGTCGTCTTTAACGATAACTTGTGTTTCCCATCCGTTAATAAATCTGCAGCTACATCGTGAACATCGAATATGCTCGAGGCGGAGCTTACAGGCTGACCGCTCTCGGGAAATCGTTATTTTAAATACACCCTGAGCCACAGTACATGATATTGTTGTATCCAGGGTAAAAATACACCTCGACTACACCGCGACAGAAACCCGAGCGCTCCCGCTCTCCCCGACGCGGCTTTCCTGCTCGTTATTACCGGCAGAACTGCGCGCGTGGACGGTCCGCGAGGGCGAGCCGGGCCCAGACGAGCTGCCTGCACAATAACGCGAGAGAGCCTTCTGGTTTTGTCGGTGTAATGGTTCAGTCCGAGGTGCGAACACCTTTGGGACCGAGCGTCTCTTCTGTCGTACGCAAGCGTGACTCCGTAGCGTCTACACAGGGATCCTCCCCGGTCGGGACGCGCGCGCTGACGGTGCGACGGGGCTTTTGAGACGCTGGCAGTTGAGTAAACAAATCGATACAAGCCGCGATCAACAAGCGTGCTCCTGCAGTGATGTAAAGATGGCGAGACTGCTTCACAACTTGCTGCTGTTGACGGTCGGACTGACGCTGAAGATCAGAGTTATGGGATACTGGTCTCTCGTGTACGGATACTGCGCGCTGTGCACCGGCGTAGCGCTGCTCAAACTTGGCTGGAATATCATCCTACGGCCGTCGACAACCTTTCAGTGGACGGTTCGTGAGACACCCCCCGCGTGCCTGAATGACACGTCCTTGGGAACCCACTGTTATGTTAGAATCAAGGAGTCTGGACTCAGATTTCACTATGTTGCCGCTGGAGAACGAGGAAAGCCACTTATGCTGTTTCTGCATGGATTCCCTGAGTTTTGGTTCTCCTGGCGTCACCAGCTGAGGGAATTCAAGAGCGAGTTTCGTGTCGTTGCTGTGGATATGCGAGGCTACGGGGAGTCTGACCTGCCCTCCTCCACTGAGAGCTACAGACTGGACTACCTTGTCACCGACATCAAGGACATCGTGGAGTATCTGGGATACAACAGATGTTTTCTCGTGGGGCATGACTGGGGCGGCGTCATCGCATGGCTCTGTGCAATTCACTACCCTGAAATGGTGACAAAACTCATAGTGCTGAACAGCCCTCACCCCTGCGTGTTCACTGATTATGCCCTTCATCATCCCAGTCAGTTGCTCAAGTCCAGttactacttttttttccagttgcCATATTTCCCAGAGCTGATGCTCTCCATCAATGATTTCAAGGCGCTGAAGAGTTTGTTCACCAGCCGCAGCACAGGAATCAGCTGTAAAGGCCGCTGGCTCACCACAGAAGACCTGGAAGCGTATCTGCATGCCCTCTCACAGCCGGGGGCCCTCACTGGGGCCCTCAGCTACTTCAGAAATGTCTTCAGCGTTCTCCCGCTGAGTCAGAGTGAGGTGAAGTCTCCCGTATTGCTGCTGTGGGGCGAGCGAGACGCCTTTTTGGAGCAGGACATGGCCGAGGCCTGCCGTCTGTACATCAGAAACCATTTCCGCCTCAACATCATCTCTGGAGCCAGCCACTGGCTTCAACAAGACCAGCCCGATATCGTCAACACACTCATATGGACTTTCATTAAGGAGGGAGAAGGCCGGAAAAACTACAGGAACTTATAACGGGGTCCTTCTCCCTCTGAGCTCGCCTGAAGAGAGGGGACCAGGGAAACGCCTGTGAAAGCAAACCAACGTTAATGATTAATGCAATCGTTGTTTTAAAATTTGATACATCTGAGATATAGAAACAAATCAAACTTCAGTGAAgcggaaaaaaaagaacaaaagcacattttgatcGGAGGGGATGCATAGAGAGTAGTGCGTTTAATCTATTTTTCTCAAGTTTGCACATGACATTCGCCTTAAGGTTTCTTGGTGACAGTGTTTAAAAGTGTGTTGCAAAATATCTGTGAGTAAGTTGTATCGTGTGGTGCCTTTCGACATATCGTTTTGCAGCGTAAAAGATGTGCCATGTCTTTTTGAGAGCGAGCTGTGGGGTTTGTATCAGCTCTCTGCACTCTCTGTATCACCTCTCTATCAGGTAGTgatgtctttttcttttgtaccTCTGACAATTCTGGCTTAAACGTTCGAGAATGTCATTATTTTGATCTTCCTGTATGATAAAACAAAGTGATGTTTCGGtattgtacactttttttgtatcTTCTCCTGAACACTGCATCTAAGACAGTAGAACCAGCTCTGCGTCGTTTTGATTTtctaagcaaataaataatagcgGAAACTCACTGACTTGAATAATATTCACTCTCTCTGTTCATATAAGGTCGaactattaaacattaaacagttACTTATAACTTGGATTTAATAAGATGCTTCCCGTTTTTAAGATATGTGGAGTAGATTTTAAGTCTGAATAAATGACAATGGAAAAAAGGAGGTCAATTGTTAATGTTAGTAAATTAACCAAACTAAActaattaaagttaattaatgGGGCCTTGTAAAGTGATACTGGTTTACCCAACACAGCCCTCCATTTTAAATCCAAGTCATTAAGGTAATGCAATAAACTACTCAAGGTGCAACACCAAGTTAGCAGCCAATCATGTTCAATCAAATTCAAACGGtctacaaaataaaggtttctaCTAAATAACACAACAGTCTAgcttttctattattattttgactgCTGTTATAAGTCATGCTGTCAGATTCTTCCTCTTACTGTTCTCCATGACTTCGTTCCGAATAAATGTATTcgtataaacaaca
>XM_043241427.1
aaaggtcacggtttccacaatagcatttatatataatgcacttATCTAAatagcacttttaaaaataatgtctgcTTTCAAAACTTGGCATGGAAATATGTTttaacaccaaatcagcatattgataCTGAAActttagctttgccatcatacGATAATAAATACGTTGTGCAGTACATGAAAACGAGTTATTCGTATAAACCGTATGTTTCACAGCATTACCGTTTTTTACTacatttgaatcaaataaatgcagccttcgtAAAGAAACCATTAAAACGTTTTACTTTTCAAGACCAGGCTATTCTTTTTGAACAAGGGTAAACTTCCGAGTTTGCATGAAATTCAGTGATGTTTTGTGATATTAAATAGCGTGCTTTATTCGAAACAAACGTTGGCagtttatatacaatttttaatatagttGAGAGTTTTCAAAACTGTCGCGACGCTTTCGTATAGCTAAGTTCCAACTTGTTTAGCTCTAATGAATAGGCAAAAACTTACACGCCTGCGTCCAAAAGTTATTTAATCCCCATTTCGTCGTCTTTAACGATAACTTGTGTTTCCCATCCGTTAATAAATCTGCAGCTACATCGTGAACATCGAATATGCTCGAGGCGGAGCTTACAGGCTGACCGCTCTCGGGAAATCGTTATTTTAAATACACCCTGAGCCACAGTACATGATATTGTTGTATCCAGGGTAAAAATACACCTCGACTACACCGCGACAGAAACCCGAGCGCTCCCGCTCTCCCCGACGCGGCTTTCCTGCTCGTTATTACCGGCAGAACTGCGCGCGTGGACGGTCCGCGAGGGCGAGCCGGGCCCAGACGAGCTGCCTGCACAATAACGCGAGAGAGCCTTCTGGTTTTGTCGGTGTAATGGTTCAGTCCGAGGTGCGAACACCTTTGGGACCGAGCGTCTCTTCTGTCGTACGCAAGCGTGACTCCGTAGCGTCTACACAGGGATCCTCCCCGGTCGGGACGCGCGCGCTGACGGTGCGACGGGGCTTTTGAGACGCTGGCAGTTGAGTAAACAAATCGATACAAGCCGCGATCAACAAGCGTGCTCCTGCAGTGATGTAAAGATGGCGAGACTGCTTCACAACTTGCTGCTGTTGACGGTCGGACTGACGCTGAAGATCAGAGTTATGGGATACTGGTCTCTCGTGTACGGATACTGCGCGCTGTGCACCGGCGTAGCGCTGCTCAAACTTGGCTGGAATATCATCCTACGGCCGTCGACAACCTTTCAGTGGACGGTTCGTGAGACACCCCCCGCGTGCCTGAATGACACGTCCTTGGGAACCCACTGTTATGTTAGAATCAAGGAGTCTGGACTCAGATTTCACTATGTTGCCGCTGGAGAACGAGGAAAGCCACTTATGCTGTTTCTGCATGGATTCCCTGAGTTTTGGTTCTCCTGGCGTCACCAGCTGAGGGAATTCAAGAGCGAGTTTCGTGTCGTTGCTGTGGATATGCGAGGCTACGGGGAGTCTGACCTGCCCTCCTCCACTGAGAGCTACAGACTGGACTACCTTGTCACCGACATCAAGGACATCGTGGAGTATCTGGATTATGCCCTTCATCATCCCAGTCAGTTGCTCAAGTCCAGttactacttttttttccagttgcCATATTTCCCAGAGCTGATGCTCTCCATCAATGATTTCAAGGCGCTGAAGAGTTTGTTCACCAGCCGCAGCACAGGAATCAGCTGTAAAGGCCGCTGGCTCACCACAGAAGACCTGGAAGCGTATCTGCATGCCCTCTCACAGCCGGGGGCCCTCACTGGGGCCCTCAGCTACTTCAGAAATGTCTTCAGCGTTCTCCCGCTGAGTCAGAGTGAGGTGAAGTCTCCCGTATTGCTGCTGTGGGGCGAGCGAGACGCCTTTTTGGAGCAGGACATGGCCGAGGCCTGCCGTCTGTACATCAGAAACCATTTCCGCCTCAACATCATCTCTGGAGCCAGCCACTGGCTTCAACAAGACCAGCCCGATATCGTCAACACACTCATATGGACTTTCATTAAGGAGGGAGAAGGCCGGAAAAACTACAGGAACTTATAACGGGGTCCTTCTCCCTCTGAGCTCGCCTGAAGAGAGGGGACCAGGGAAACGCCTGTGAAAGCAAACCAACGTTAATGATTAATGCAATCGTTGTTTTAAAATTTGATACATCTGAGATATAGAAACAAATCAAACTTCAGTGAAgcggaaaaaaaagaacaaaagcacattttgatcGGAGGGGATGCATAGAGAGTAGTGCGTTTAATCTATTTTTCTCAAGTTTGCACATGACATTCGCCTTAAGGTTTCTTGGTGACAGTGTTTAAAAGTGTGTTGCAAAATATCTGTGAGTAAGTTGTATCGTGTGGTGCCTTTCGACATATCGTTTTGCAGCGTAAAAGATGTGCCATGTCTTTTTGAGAGCGAGCTGTGGGGTTTGTATCAGCTCTCTGCACTCTCTGTATCACCTCTCTATCAGGTAGTgatgtctttttcttttgtaccTCTGACAATTCTGGCTTAAACGTTCGAGAATGTCATTATTTTGATCTTCCTGTATGATAAAACAAAGTGATGTTTCGGtattgtacactttttttgtatcTTCTCCTGAACACTGCATCTAAGACAGTAGAACCAGCTCTGCGTCGTTTTGATTTtctaagcaaataaataatagcgGAAACTCACTGACTTGAATAATATTCACTCTCTCTGTTCATATAAGGTCGaactattaaacattaaacagttACTTATAACTTGGATTTAATAAGATGCTTCCCGTTTTTAAGATATGTGGAGTAGATTTTAAGTCTGAATAAATGACAATGGAAAAAAGGAGGTCAATTGTTAATGTTAGTAAATTAACCAAACTAAActaattaaagttaattaatgGGGCCTTGTAAAGTGATACTGGTTTACCCAACACAGCCCTCCATTTTAAATCCAAGTCATTAAGGTAATGCAATAAACTACTCAAGGTGCAACACCAAGTTAGCAGCCAATCATGTTCAATCAAATTCAAACGGtctacaaaataaaggtttctaCTAAATAACACAACAGTCTAgcttttctattattattttgactgCTGTTATAAGTCATGCTGTCAGATTCTTCCTCTTACTGTTCTCCATGACTTCGTTCCGAATAAATGTATTcgtataaacaaca

Function

symbol description
ephx4 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to several human genes including EPHX4 (epoxide hydrolase 4).

NR:

description
epoxide hydrolase 4

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K22369 EPHX4; epoxide hydrolase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241426.1 True 3326 mRNA 0.44 7 11042046 11054843
XM_043241427.1 False 3201 mRNA 0.44 6 11042046 11054847

Neighbor

gene id symbol gene type direction distance location
btbd8 si:ch73-389b16.2,LOC107749984,LOC107678356,LOC107675433,LOC107730686,LOC107555388,LOC107564439 coding downstream 1017 11016892 ~ 11041029 (-)
si:ch73-389b16.1 si:ch73-389b16.1 coding downstream 28702 11010998 ~ 11013344 (-)
scinla scinla,LOC107730699,LOC107675434,LOC107564434,LOC107678357,LOC107733908 coding downstream 36622 10996397 ~ 11005424 (-)
zgc:109982 LOC107678358,LOC106920129,LOC103368644,LOC103139842,LOC107733899,LOC105940069,LOC103463988 coding downstream 45986 10990975 ~ 10996060 (-)
dr1 dr1,LOC107555385 coding downstream 53623 10985524 ~ 10988423 (-)
znf326 znf326,LOC107749979,LOC107698885,LOC107564631,LOC107555393 coding upstream 355215 11410062 ~ 11414618 (-)
lrrc8db LOC107749977,LOC107730703,LOC107698886,LOC107564626,LOC107675437,LOC107555394 coding upstream 360421 11415268 ~ 11424793 (-)
lrrc8c LOC107749978,LOC107593158,LOC107698887,LOC107564627,LOC107675427,LOC107730691 coding upstream 374027 11428874 ~ 11437103 (-)
pkn2b zgc:153916,LOC107749976,LOC107662805,LOC107564625,LOC107698884,LOC108413223 coding upstream 394990 11449837 ~ 11481193 (-)
lmo4b lmo4,lmo4b,LOC107593176 coding upstream 640801 11695648 ~ 11708480 (-)
G44353 LOC107569358,LOC107704001,LOC107555380,LOC107733907,LOC107757425,LOC107660462,LOC105019150,LOC108438877 non-coding downstream 137749 10694602 ~ 10904297 (-)
G44350 NA non-coding downstream 146694 10687060 ~ 10895352 (-)
G44341 NA non-coding downstream 388676 10646133 ~ 10653370 (-)
G44339 NA non-coding downstream 459762 10582033 ~ 10582284 (-)
G44338 NA non-coding downstream 460017 10581409 ~ 10582029 (-)
G44447 NA non-coding upstream 177604 11232451 ~ 11232784 (-)
G44449 NA non-coding upstream 179643 11234490 ~ 11234694 (-)
G44450 NA non-coding upstream 180028 11234875 ~ 11235096 (-)
G44452 NA non-coding upstream 183115 11237962 ~ 11238198 (-)
G44457 NA non-coding upstream 184272 11239119 ~ 11239464 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 56914 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 206521 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other downstream 325305 10710045 ~ 10716741 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other downstream 533043 10434204 ~ 10509003 (-)
LOC122347367 NA other downstream 683196 10355877 ~ 10358850 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other upstream 188 11055035 ~ 11069466 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other upstream 1470909 12525756 ~ 12897718 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 2600413 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 2663355 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 3105628 14160475 ~ 14193166 (-)

Expression


Co-expression Network