LOC122346752 (LOC107590657,LOC107694127,LOC107717944,LOC107696773,LOC107752637,LOC107552269)


Basic Information

Item Value
gene id LOC122346752
gene name LOC107590657,LOC107694127,LOC107717944,LOC107696773,LOC107752637,LOC107552269
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13039523 ~ 13058121 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241601.1
TTTTGACTGAACACTCATACTGTAGGGGTCTGTTCCGGCTTCAatgaaaagagacaaaaaataatcAAGAGATCAGAAGacttcaaatatcaaatatcctCCAGTAAAGGCTGGAGGACAAAAGGACTCAGTCATGGTGGTTTTAAGAAAGGGAGACTATGTGTGGGTGGACTGCAGTGATGGGGTCCAAATCGGAGCTGAAGTCAGACTTTCAGACACTGGACAACTTCAGCTCATCGACGATGAGGGAAAGGAGCACAAGATTAAGAAGGACAACTCCCTGAAGCCCATGCATCCCACGTCAGCGAATGGTGTGGATGACATGATAAGGCTGGGTGACCTAAATGAGGCCGGACTGTTACGGAACCTTCTAGTGCGCTACAAAGAAGGAACAATCTATACATACACAGGGTCGATTCTGGTGGCAGTGAACCCTTACCAGCTGCTGCCAATCTACACTCCAGAGCAGGTGGAGCAGTACACAGACCGGCGGTTGGGTGATCTCCCCCCACATGTCTTTGCCATCGCAGACAGCTGTTTCTTCAACATGCGACGGAACCGCAAAGACCAGTGCTGCATCATTAGTGGGGAGTCTGGAGCAGGAAAAACAGAGAGTACCAAGCTCATGCTGCAGTTTCTTGCGGCGGTGAGTGGGCAGCGCTCCTGGATCGAACAGCAGGTTCTAGAAGCCAACCCTATCTTAGAAGCTTTTGGTAATGCAAAGACCATTCGCAATGACAACTCCAGCCGCTTTGGAAAATATATTGACAtcaactttaataaaaatggagCAATCGAGGGGGCCTGCATCGAACAGTACCTGCTCGAGAAATCAcgtgtttgtaaacagGCCCCACAAGAAAGAAACTACCACATCTTTTACTGCATGCTTATGGGAATGCCTCCTGACCAAAAAAAGATCTTGTCGTTGGGACATGCTGCAGAATACAACTATCTCACCATGGGTCAGTGCACTACATGCGAAGGACGGGATGACATAAAAGAGTACGCCAGTTTCCGCTCAGCAATGAAGATCCTGACATTCACAGAGAATGACACGTGGGAAATTAACAAGCTTCTTGCAGCCATCCTACACCTGGGGAATGTGGACTTTGAAGaaaccATTATGAACAACCTCGAGAGCTGTGATGTTCTTTCCTCTACACATTTCAAAATGGCCGCACAGTTATTAGagGTTGCCCCAAATGCCCTGGATGTGAGCTTGACACAACGCTCTTTGATGACCAACAGGGAGAGTGTGTCCAAACCTCTGACCTCAGCCCAAGCAGTGGACGGCAGAAATGCGTTTGTAAAGGCCATCTATGGAAGGCTGTTTGTGTGGATTGTGGAGAAAATCAACAGTGCCATTTACAAACCTCCTCCTGATGACCCCAAATACGTCCGACTTTCTATCGGTTTGTTGGACATTTTCGGCTTTGAAAATTTCAACAACAACAGCTTTGAACAGCTCTGCATCAACTTTGCCAATGAGCAGCTTCAGCAGTTTTTCGTAAAACACGTCTTCAAGCTTGAACAACAGGAATACGCCCGTGAAGACATTGTCTGGAATAACATTGACTTTAACGACAACCAGTGTACGCTTGATGTTCTGGCCATAAAGCCTCTCAACATTCTCGCTCTTATTGACGAAGAGAGTCTCTTCCCTAAGGGCACAGATGCTACAATGCTTCACAAAATGAATCAGGTTCATGAGAAGGGTGAAATCTACATGCCCCCCAAAAATAATCACGACACACAGTTTGGAATCCAGCATTTTGCTGGAGTTGTCTACTATGACTGCAACGGCTTCCTTGAGAAGAACAGAGATACTCTGAGTAATGATTTGATCCAGCTGATACACACATCATCCAATAAGCTCCTAAAGCAGATATTTCACAATGAGCTCATCACCACGGAGGCAAAAACAAGTTCCAATCACACTATCGTCACCCCAAAAAACTCACTCCGGCAAACAACAGACTCAAAGAAACGTGTGCCTACATTATGTGGGCAGTTTCGTCAGTCCCTGGACTCTTTAATGAAGACTCTAACTGCTTGTCAGCCTTTCTTCATTCGCTGTATTAAACCCAATGACTTCAAGAAGCCTATGCTCTTTGACAGGGAACTGTGTATCCGTCAACTTCGTTATTCAGGAATGATGGAGACTATCCGCATTAGGAAGGCTGGATATCCTATTCGTCACACGTTTGATGAGTTTGTAGAGCGCTACCGTGTGCTGCTCAAGTCCAGTGTTTGTGACCCCAAAACTGAGAGTGCCAAGAAATGCTGCGAAAGCATTTGTGACAATGTTCTGAATAAAGAGGACTGGAAGATCGGCAAGACTAAAGTCTTTCTGAAGGATTTCCATGATACCGTTTTGGAACTGGCACGAGACAGGGCTCTCAATGAGAAGGCACTTCTTATTCAGAAAGTACTGAGAGGATATAAACACAGGAAAGTGTtcctgagaaagagaaaagcagcTGTGACCATACAGAAAACATGGCGAGGGCACAAAGTCAGAAAACTTTACAGAGTGGTCCAGTTGGGTTTTGCCCGTCTGCAAGCTCAAGTACGCTCTCGACAAATGGCCTGGCGGTATAAACAAAAGCGACAAGCAACTGTTCTGCTTCAGGCTCAGACTCGTGGCTACCTGATGAGAAAGGAGTGGAAACGAAAGAGAGCGGCAGTGATCCTCCTGCAGGCTTACACAAGAGGAACTCTAGCTAGAAAAGCTGTCAAGAAGATGAAGAGAGATGCTGTCCTCTCACTTCAGGAACGTAGAGCAGAAGAACTTGCTGCTCTAGAGAGGCAAAGGAGGCTTGATGAAATTCTGcggcagaaaaaagaaagagaggcgGCAGAACAGCTGGAATCCATCACAGACCAGGAAATGGTGGATGATATCTTTGGATTCTTGCCTAGAATGGTTGGCGGACAGGAGGGCCAGGCACCTGTGGGCTTTGAGGACTTTGAGGGAAAGCGAATGGTGCTTGAAGAGGTGGATCTAGATGATGCTCCTATTATGGAGATTCCAGAGGAAGACTATGATGATTTGGATGAGTATTCGTTCTCCAAGTTTGCTTCCATGTACTTCCAGGGAGCTGCCACACCTACACACATTCGCCAGAGATTACGCCAGCCTCTGCTCTACCATGAGGACGAGAATGATGTCCTGGCTTCACTAACAGTTTGGTGGATGATCTTGAGATTTATGGGTGATCTTCCTGAACCAAGAGCTCAGGGGGTCTCCAGAAGTGGACCAGCCTTTGTAGAAGGCTCTCTTCAGGAAGATGTGGCCTCCAGAAAAGATAGACGCCTTAGCCATATGGTGGGCCTGGACCAGAGAATGAGAAATACAAGAAACTCTCAGAACAGGAAACTCAGTACAGTTCCAGAAGACGCTTCCCGCAACAGAAAATCTTCAACTTTTACAGACATACTGGCCCGAAACAAAAAATCTGTCCAAGATGATGGTGTTCCAAGCCGCAAACTATCTGCCATTCCAGAGCAGGGTCCAAACAGAAAGACTTCAACTTTCACTGATATAATGTCCCGAAACAGAAGGATCTCTACAGCTGCTGAGGGGCCTCAATCCAACAGAAGAACCAGTAGAAAACCGTCTGTAATAGCAGAAGAGgcaGAGGATGGGACTGAAGTTCCCAAACAACCCACTGTGCAAACTATTACTGAAGAAGATGAAATGAACTCAGATGGACTTACCCTGGATCGACCAATGACATCTCTTGAAAAGTTGCATATCATCGTTGGATACGCCATTGTCAGACGTGACCTCAGGGATGAAATCTACTGCCAGATCTGTAAGCAGCTCCAAGAGAACTCAAACCGTGGTAGCTTCTTCCGTGGCTGGATCCTCCTCTGCATCTGTTTGGGAATTTTTCCTCCTACCGAGCGCTTTATCAAGTACCTGCAAAGTTTTCTTCGTTTCGGTCCCGTGGGATACGCGCCGTACTGCGCTGACAGACTTAGACGTACTGTTGCCAATGGAGTGCGTGGAGAGCCTCCCAGCTGGCTGGAGCTCCAGGCCACAAAGTCCAAGAAACCCATTGGAATCTTAATAACTATGATGGATGGCAGGACTATCAGTTTGCCTGTCGATTCTGCCTCCACATCTAAAGAGGTCTGCCAGGTGCTCTCACAGAAAGTCAAACTTCAGGACACGTTTGGCTTCTCACTTTACATAGCCTTATATGACAAGGTGTGGTCCCTAGGTAGTGGCCGTGAGCATGTGATGGATGCCATCTCTCAGTGTGAGCAGGAAGTGAAGAGGAAGGGTGGGCAGGAGCAACATGCCCCTTGGCGTCTCTTCTTCCGTAAAGAGATCTTCACACCTTGGCATGACTGCAGCCAGGATAATGTCAGCACAGACATTATCTACAGACAGGTCATCAGAGGCCTGAAATCTGGAGAATACCAGTGTGAGAAGGAGGAAGACACTGTTGCACTTGCAGCAAAGCACTTCTATGTGCAGTTTGGGTCAGACATGAGTATGGAGAATACCAGGACTGTAGTTAAGGACTGCATTAACTCCAAACTATTGGAGGCCAAGTCAGAAGAAAAGTGGACCCAGATGGTCAACACGGCACATGCGCAGGGCCCATTAATAAACTCTCGGACCAAGTCTGATAAAATCAAAGCAGAGGTGGTTGATTATGCTCGTCAAAAGTGGCCAATGCTCTTCTCCAAGTTTTTTGAAGTTGCCAAGTTATCTGGTCCTCCTCTACAAAAGAGCAAGTTCATCTTTGCCATAAATTCAACTGGAATAACATTCCTAGATGAACGAGAAAAGAATCTCCTGGTGCTGTCTTACCCAGAGCTCACCGGGGTCAACGCTATCAGAGaaaggaaatgtgtgtgtttgctgactCTGAAAGGAGACTTCACACTGAATGCAATCATGGCCACTGACATCTCAGATCTGGTAGCCATGTTCCTGGCAGGCCTGATACAACGATCACAATATGCTGTGACCCTACAGGAGGTTAACAGACAAGatGATAAAACATTCCTCAGCTTTAAGAAGGCGGAGCTCATCTGCCTCATTAAGGATGATGAGTTTTCTGTTGCTCGCGGCTGGTTGAAGGGTAAGAATGAGCGGACAGGACAAATTGGCGCAGTCCCCGCGGATGCTGTCTTGATTCTTCCGACTCTTACAAAGCCGACAAATGAAGTCCTGAGCCTGATCAGCCTGTCTCCAGATCAAAGAAAGACCATCATAGATAACACTGTAAAAGGAACCATGACTGAAAGAGTGGCTCCTTCAACTCTAAAAGATTTCTCTGTTGATTATTTCAGGCAGCCCATCAAAGATGTGAACAGACAGGTGATCTCCAAGAACGCAGCACCCGAGAGACTGTGGGCCAACTCCAGAGAACCAATCAGACAGCCCTTGCTGAAGAGACTGGTGGGCAATTCAGATTTAAGCCCACTAGCCTGCAATGCCTTCACTGCTATTCTAAAGTACATGGGTGACTACCCTACTAGACAAGTCCAGAGCCCCCTGGAACTTACAGACCAGATCTTTGGCCCACCTACACAAAATGAGGAGCTCAGAGATGAGATCTACTGTCAGATCATGAAACAAATGACCAGCAATAACAACCGGTACAGTGTGGAGCAGGGCTGGCAGCTGCTATGGCTGTGCTGTGGTCTCTTTCCTCCCAGTAACTCTCTGCTGAAACATGCTCAGCGTTTCATAGAGACACGCAAACGAGAGCCATTGGCCGCAGACTGCCTCCAGAGACTGCAAGGGGCTCGGAGaATGGATCCCAGAAAGCTTCCACCTCACCAGGTAGAGGTTGATGCCATTCAGCAGAACAGCACCCAGATCTTCCACAAAATTCAATTCCCCAATGACACTCAGGAGAATTTTGAGGTGGCATCCAACACCAAGATAAAAGACCTGGTCCGGACCATTGCTAATAAACTCATATTGTCCTCATCTGAAGGTTTCAGCCTCTTTGTGAAAACCCCTGACAAGGTTCTGAGTCTGAATGAAACTGACTACTTCTTTGACAGCCTGAGACAGATTACTGACTGGTCCAGGAGAGCAAAGAGAGTGAATCAGGCAGGCGGTCCAGTGAATGTGTCTTACACTGTTTTCTTTATGAGAAAACTATGGTTCAACATTATTCCTGGTAGAGATGTGGAGGCGGATCTCATTTTCCATTATCCACAGGAGTTGCCCAAGTACTTGAGAGGTTATCATCGTTGTACCAAAGAAGAAATGGTGGTGCTAGGTTCTCTACTCTTCAGGGTGAAAGTGGACAATGATAAAACTCAGTTTCCCATGATTCCTAGGATGCTGAAAGACCTGGTGCCTAATGACCAGCTTAAAGCCATGTCCGCTGACGAATggaaaaagCACATTTTTGCTGAGTACAACAAGCAAACTGGCTTAATTGTGGAGCAGGCAATGATTGGCTTTTTAAAGATTGTCTACAAATGGCCCACATTTGGCTGCGCCTTTTTTGACGTCAAACAAACCTCAGAGCCCAATTTCCCCGATATTGTGAGGATTGCCATTAGCAAACAGGGTGTCACTTTCATTCACCCCAAAACAAAGGACATTCTGGCAGTGCATCCatataataaaattgcaaaCTGGTGCAGTGGGAGCACATACTTCCACATGACTGTAGGAAACCTTGTCAGAGGGAACAAAATCCTGTGTGAAACGTCCCTGGGCTACAAAATCGATGACCTGCTGACTTCCTACGTCAACATGTATCTTAATGAGAAGAGAGGGCAAAGACGCAGTCAACACTTTGACTAAAAATAACAACCCATCAATGACCTTATGTGCCTTTCTTTTAAAGATGcattcacatataaacacaaccAATgagtaatgttaaaaacagcataaattATGAAACTAAATAAGTGTGGATTTATTGTTCAATGTGATATGCTATATATACTGCAAAATGTGTGATGCAAACTGTTGCGATAAagatttaaagctgtttttccTCGATATTCTGCCAGAATGTGAAGACTGTAATTTCAGTCAGATTACTGGTTGACTAATATTTAATGGtataaatgaatcattacaGTCAGTGGATAAAATCGTTGATGCATATGattgaaattgttaaataaatgactgtgaGGTGTAA

Function

NR:

description
PREDICTED: unconventional myosin-VIIa-like

GO: NA

KEGG:

id description
K10356 MYO1; myosin I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241601.1 True 7145 mRNA 0.46 49 13039523 13058121

Neighbor

gene id symbol gene type direction distance location
sap130a sap130a,LOC107696772,LOC107590658,LOC107717942,LOC107552246 coding upstream 1243 13024547 ~ 13038280 (+)
amotl2a amotl2a,LOC107717938,LOC107694113,LOC107752638,LOC107590659,LOC107696770,LOC107552270 coding upstream 25122 13004991 ~ 13014401 (+)
cep63 cep63,LOC107590660,LOC107694114,LOC107552272 coding upstream 57994 12972091 ~ 12981529 (+)
rab6ba rab6ba,rab6b,LOC102207753,LOC100696791,LOC103151367 coding upstream 74058 12944295 ~ 12965465 (+)
slco2a1 LOC107753639,LOC107694117,LOC107552274,LOC107593170,LOC107696767,LOC107752643 coding upstream 141626 12881334 ~ 12897897 (+)
gpr17 gpr17,LOC107752663,LOC107717943,LOC107694121,LOC107590682,LOC107552259,LOC107696754 coding downstream 738 13058859 ~ 13064429 (+)
inpp5d LOC107694111,LOC107590654,LOC107717933,LOC107696774,LOC107552268,LOC107752650 coding downstream 7717 13065838 ~ 13080046 (+)
LOC122346939 lpp,LOC107684332,LOC107590653,LOC107717931,LOC107696776,LOC107752632,LOC107552245,LOC108427685 coding downstream 61074 13119195 ~ 13279180 (+)
tprg1 tprg1,LOC107590652,LOC107751286,LOC107684336,LOC107552257,LOC107696755,LOC107752662 coding downstream 255936 13314057 ~ 13333574 (+)
tp63 tp63,LOC107574491,LOC107590651,LOC107659018,LOC107752631,LOC107696778 coding downstream 292400 13350521 ~ 13390651 (+)
G44622 NA non-coding upstream 339946 12664820 ~ 12699577 (+)
G44611 NA non-coding upstream 367858 12564092 ~ 12671665 (+)
G44606 LOC107593190,LOC107696746,LOC107552261,LOC107753661,LOC107694109,LOC107752664 non-coding upstream 545881 12492953 ~ 12493642 (+)
G44604 NA non-coding upstream 557341 12477124 ~ 12482182 (+)
G44575 hdlbp,LOC107733253,LOC107694132,LOC107552253,LOC107696756,LOC107752661 non-coding upstream 1045386 11993558 ~ 11994137 (+)
G44615 NA non-coding downstream 25259 13083380 ~ 13084230 (+)
G44640 NA non-coding downstream 35735 13093856 ~ 13095910 (+)
LOC122346816 NA non-coding downstream 43158 13101279 ~ 13103566 (+)
G44872 NA non-coding downstream 255432 13313553 ~ 13313854 (+)
G44873 NA non-coding downstream 277068 13335189 ~ 13335542 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 233823 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 512566 12521773 ~ 12526957 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other upstream 879624 12154268 ~ 12159899 (+)
G44588 NA other upstream 947068 12087399 ~ 12092455 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other upstream 1028984 12002147 ~ 12010539 (+)
smx5 lsm2,LSM2,smx5 other downstream 22444 13080565 ~ 13082119 (+)
G44645 NA other downstream 50614 13108735 ~ 13109366 (+)
G44887 NA other downstream 336108 13394229 ~ 13409912 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 914052 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 2178044 15236165 ~ 15244280 (+)

Expression


Co-expression Network