gpr17 (gpr17,LOC107752663,LOC107717943,LOC107694121,LOC107590682,LOC107552259,LOC107696754)


Basic Information

Item Value
gene id gpr17
gene name gpr17,LOC107752663,LOC107717943,LOC107694121,LOC107590682,LOC107552259,LOC107696754
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13058859 ~ 13064429 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241607.1
GAGAggatattgtgaaatgttttagcatattttagTCATGAAGAAAGAGCTTAATACAAATGGAATCTTTCAGAGAAGTATTCCAAAGGTTGCTAAAATGGAGTCCCCCCTGACAGAACTTCCCACATTGCTGTCCAATCAATCCATGGAGAGCTGTCCACCTGTGGACAATACAGTAGAGAACATGATCTTTGGAATCTACTACATCATAGTTTTTCTTCTGGCGCTGAAGGGTAATAGCCTTGCCCTGTGGATCTTCGCCCGCCAGAGAGGCAACTCTTCTCCAGCCAACGTCTTCCTGCTTCATCTTGCTGTGGCCGACCTGTTTTACGTCTTCGTTTTACCCCTCAGAGCCACTTATCATTTAACCGGGGGACACTGGCCGTTTGGTGAAATCCCCTGCCGCCTCGCCGGCTTCTTCTTTTATGTTAACATGTACGCCAGCTTGTACTTCCTGGCCTGTGTTGCAGGTGATAGATACCTTGCTGTGGTACATGCCGTACGTTCCCTCAAGGTCAGGCGCCCTCGTTATGCTCACATAGCCAGTTTTGCTCTATGGGCTTTGGTGATAGTGTCTATGGCGCCCCTACTGGTCACCAAGCAGACTGCAGACGTCAATGGCTCTACTGTATGCTTGCAACTGTATAGAGAAAGGGCCTCTCGGCGTGCTCTCGTCTCTCTCGCGGTGGCCTTCACGCCACCTTTCATCGCCACGTTGTCTTGCTACCTGCTGATAGTGAACAGTCTGCGGAAAGGTTCAAGGCTGGAGCCGGCTCTGAAACTCCGAGCTCTTCGCACCATTGGTCTGGTTATGCTTATCTACATAGTGTGTTTTCTGCCCTATCACTTAAGCCGTGCAACCTTCATCCTGGGTTACGGACACCCAGACTTGTCCTGCCAAATCAAAAGAGGGCTAGCCCTGGCTAACCGGCTTACTTCCTCTCTTACCTGCCTGAACGGGGCTTTGGATCCACTGGTGTATCTGTTTGCGGCTGAGAAGTTCAGGGGTAGCGTTCAGAGGATTTTCTGCAAAGACAAATCGGGGGGATCCGGCGCTACAAGCGGGGACCTGAAAGGCACACATGAGAGTTCTCTGAGTGCAAAGTCTGAGTTCTGAGAAAGCGCTTAAAATCATACAGATGGtatgaatattttgtatttgttttagtgatttgGCCTACACCTTGTGATAGTGTACGGTCAGTTCAAGAAGCCTTATGTATAGCCCACAATGTGATTTGGACatgttaaaacaaatgtatgtaagtttaaagatctgttttaaaatcactttgatGGTACACTGACGTGATAAGCTGAATGGCTTCTGTTTTTTCTCCTAGGAGTATATAAGTTTGGTGTGTGGGTACGAAGGCTGGAttgctttataaatatatgtgcacAGATATCCGCTGTAATCACCACAGTGAtatgtttatgaatttaaatggtttgtatcattttaaatgggTACAAACCAATAagaatttttactgtatcaCTTTTTATTGTCAAAGTGTTCTCTGACTTCCTAGGTTGACTACAAAAGCCATTGAACTGATTTAAATTCTCAGGACGTTTTTTTACGGAAATTAAAAACGTGATTTACTCACGTTCTCTAAATCTTCTGTTCTGTGTGTGACACATCAAGCCTTATGTTCGGTTAAGTACTGAATAAGAGCTATTCTGTACCTTTACGTCAATGTGTCATACAAAAAAGggattacttaaaaaatatagtaaaaatctATAGTCTCACTACAGCCTTGCTGTCATTTATGTTGCATAACACTGAGCTATTGATTTTGTTATTGAGGCAAAGCGCTCACCACATAGTCATTGCAATGTCTCTTAGCAGCGTGGACGGCATCTAGACGATCGTTGCATatgtatttaactttttttttggtttgttttgttgtctgcAGTTCATTTGATTCGGGACGGTAGGCTCTAAGTGGCTGTTGCATATATCAGTCATATACCACAGTTGTAAAGACTGTGACTAAAGACTCATCAAGGCATAAATTGTGTATAAAACTGTGTGCTGCctttttagaaattaatgttgtgtttttattagcatATTACCTGTGTGCTAATGACATGCTCTGAATTTGTCAACTTTGTGCACTACGGAAGTGCTTACGTTCTTAATGAAATCAGTGTAAAACTAATGCATTTCATACTTCATACTTTCATACATACAAAActgtataatcatttttaacgGTCCCCGGGGGGATTCTCGGGATGTAGCACCCTCAAGCTGTGTTAAGAAAAGTGTGAAGGTTAACAAaccagtgtgtttttttttttttttttttacattccttGACGACTATGTTATTAAGACTATTTAGATGCATGTGCAATTCACGCTATATAGTTGATTAATATGCTTAATGTTGCCTACCTTTAATAGTTTATGGTATATAAGTACAGATTTTTGTTGGCATAAAAtactggttttgttttcatgtgttCAAGTGATACtgatatgtattattatttatattattttaattactgtgaCCAGCtggtataaaaatgttatttttggtgtcatttttttttttttctcaagtaaAATCCATCCATCGGTCAATTTGCTACTGTATATAAATcagctgaataaatgtaaatacatttaaccaCAAA
>XM_043241608.1
ACGCTAGTCCCCGTTGCCATGGTCCCCCACCGGCTCCACATTGAGAGCAAGGCATGCCATTATTCTCCCCCTGTCGAAATGTGCTGCTTCTTCTGACTTGGGTTATTGTGGAGCGCACAAGTGGCCCTCAGAAGAAAATAGCATTGCAAAGAAAGgctgaggtcaaaggtcactttAGAGCCTTCCCATCGCGAACCGCGTTTTTGTGATCAAATTTGTTGGTTACACAAAAAGAGGCACAGTATAGTATCTCGCAGCTCAGCCTGAGAGAGTAGTCTCTCGACTCCATTAAACTCCACTGCCGCTCAACAGAAGCTCTCGCTTTTCAAGCAGCTGTAAGAGAGCGCAGGCAGCAGAACTCTCTCCCCTCTCCTCCGCTCAACTCCTTCACTACTCTACTGGCTGTTGAGGGATCAACACTCTGTTGCTAAAATGGAGTCCCCCCTGACAGAACTTCCCACATTGCTGTCCAATCAATCCATGGAGAGCTGTCCACCTGTGGACAATACAGTAGAGAACATGATCTTTGGAATCTACTACATCATAGTTTTTCTTCTGGCGCTGAAGGGTAATAGCCTTGCCCTGTGGATCTTCGCCCGCCAGAGAGGCAACTCTTCTCCAGCCAACGTCTTCCTGCTTCATCTTGCTGTGGCCGACCTGTTTTACGTCTTCGTTTTACCCCTCAGAGCCACTTATCATTTAACCGGGGGACACTGGCCGTTTGGTGAAATCCCCTGCCGCCTCGCCGGCTTCTTCTTTTATGTTAACATGTACGCCAGCTTGTACTTCCTGGCCTGTGTTGCAGGTGATAGATACCTTGCTGTGGTACATGCCGTACGTTCCCTCAAGGTCAGGCGCCCTCGTTATGCTCACATAGCCAGTTTTGCTCTATGGGCTTTGGTGATAGTGTCTATGGCGCCCCTACTGGTCACCAAGCAGACTGCAGACGTCAATGGCTCTACTGTATGCTTGCAACTGTATAGAGAAAGGGCCTCTCGGCGTGCTCTCGTCTCTCTCGCGGTGGCCTTCACGCCACCTTTCATCGCCACGTTGTCTTGCTACCTGCTGATAGTGAACAGTCTGCGGAAAGGTTCAAGGCTGGAGCCGGCTCTGAAACTCCGAGCTCTTCGCACCATTGGTCTGGTTATGCTTATCTACATAGTGTGTTTTCTGCCCTATCACTTAAGCCGTGCAACCTTCATCCTGGGTTACGGACACCCAGACTTGTCCTGCCAAATCAAAAGAGGGCTAGCCCTGGCTAACCGGCTTACTTCCTCTCTTACCTGCCTGAACGGGGCTTTGGATCCACTGGTGTATCTGTTTGCGGCTGAGAAGTTCAGGGGTAGCGTTCAGAGGATTTTCTGCAAAGACAAATCGGGGGGATCCGGCGCTACAAGCGGGGACCTGAAAGGCACACATGAGAGTTCTCTGAGTGCAAAGTCTGAGTTCTGAGAAAGCGCTTAAAATCATACAGATGGtatgaatattttgtatttgttttagtgatttgGCCTACACCTTGTGATAGTGTACGGTCAGTTCAAGAAGCCTTATGTATAGCCCACAATGTGATTTGGACatgttaaaacaaatgtatgtaagtttaaagatctgttttaaaatcactttgatGGTACACTGACGTGATAAGCTGAATGGCTTCTGTTTTTTCTCCTAGGAGTATATAAGTTTGGTGTGTGGGTACGAAGGCTGGAttgctttataaatatatgtgcacAGATATCCGCTGTAATCACCACAGTGAtatgtttatgaatttaaatggtttgtatcattttaaatgggTACAAACCAATAagaatttttactgtatcaCTTTTTATTGTCAAAGTGTTCTCTGACTTCCTAGGTTGACTACAAAAGCCATTGAACTGATTTAAATTCTCAGGACGTTTTTTTACGGAAATTAAAAACGTGATTTACTCACGTTCTCTAAATCTTCTGTTCTGTGTGTGACACATCAAGCCTTATGTTCGGTTAAGTACTGAATAAGAGCTATTCTGTACCTTTACGTCAATGTGTCATACAAAAAAGggattacttaaaaaatatagtaaaaatctATAGTCTCACTACAGCCTTGCTGTCATTTATGTTGCATAACACTGAGCTATTGATTTTGTTATTGAGGCAAAGCGCTCACCACATAGTCATTGCAATGTCTCTTAGCAGCGTGGACGGCATCTAGACGATCGTTGCATatgtatttaactttttttttggtttgttttgttgtctgcAGTTCATTTGATTCGGGACGGTAGGCTCTAAGTGGCTGTTGCATATATCAGTCATATACCACAGTTGTAAAGACTGTGACTAAAGACTCATCAAGGCATAAATTGTGTATAAAACTGTGTGCTGCctttttagaaattaatgttgtgtttttattagcatATTACCTGTGTGCTAATGACATGCTCTGAATTTGTCAACTTTGTGCACTACGGAAGTGCTTACGTTCTTAATGAAATCAGTGTAAAACTAATGCATTTCATACTTCATACTTTCATACATACAAAActgtataatcatttttaacgGTCCCCGGGGGGATTCTCGGGATGTAGCACCCTCAAGCTGTGTTAAGAAAAGTGTGAAGGTTAACAAaccagtgtgtttttttttttttttttttacattccttGACGACTATGTTATTAAGACTATTTAGATGCATGTGCAATTCACGCTATATAGTTGATTAATATGCTTAATGTTGCCTACCTTTAATAGTTTATGGTATATAAGTACAGATTTTTGTTGGCATAAAAtactggttttgttttcatgtgttCAAGTGATACtgatatgtattattatttatattattttaattactgtgaCCAGCtggtataaaaatgttatttttggtgtcatttttttttttttctcaagtaaAATCCATCCATCGGTCAATTTGCTACTGTATATAAATcagctgaataaatgtaaatacatttaaccaCAAA

Function

symbol description
gpr17 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in positive regulation of Rho protein signal transduction and positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GPR17 (G protein-coupled receptor 17).

NR:

description
uracil nucleotide/cysteinyl leukotriene receptor

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08404 GPR17; G protein-coupled receptor 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241607.1 False 2661 mRNA 0.40 2 13060546 13064429
XM_043241608.1 True 2996 mRNA 0.42 2 13058859 13064429

Neighbor

gene id symbol gene type direction distance location
LOC122346752 LOC107590657,LOC107694127,LOC107717944,LOC107696773,LOC107752637,LOC107552269 coding upstream 738 13039523 ~ 13058121 (+)
sap130a sap130a,LOC107696772,LOC107590658,LOC107717942,LOC107552246 coding upstream 20579 13024547 ~ 13038280 (+)
amotl2a amotl2a,LOC107717938,LOC107694113,LOC107752638,LOC107590659,LOC107696770,LOC107552270 coding upstream 44458 13004991 ~ 13014401 (+)
cep63 cep63,LOC107590660,LOC107694114,LOC107552272 coding upstream 77330 12972091 ~ 12981529 (+)
rab6ba rab6ba,rab6b,LOC102207753,LOC100696791,LOC103151367 coding upstream 93394 12944295 ~ 12965465 (+)
inpp5d LOC107694111,LOC107590654,LOC107717933,LOC107696774,LOC107552268,LOC107752650 coding downstream 1409 13065838 ~ 13080046 (+)
LOC122346939 lpp,LOC107684332,LOC107590653,LOC107717931,LOC107696776,LOC107752632,LOC107552245,LOC108427685 coding downstream 54766 13119195 ~ 13279180 (+)
tprg1 tprg1,LOC107590652,LOC107751286,LOC107684336,LOC107552257,LOC107696755,LOC107752662 coding downstream 249628 13314057 ~ 13333574 (+)
tp63 tp63,LOC107574491,LOC107590651,LOC107659018,LOC107752631,LOC107696778 coding downstream 286092 13350521 ~ 13390651 (+)
LOC122347353 LOC107731845,LOC107659022,LOC107692422 coding downstream 404975 13469404 ~ 13471933 (+)
G44622 NA non-coding upstream 359282 12664820 ~ 12699577 (+)
G44611 NA non-coding upstream 387194 12564092 ~ 12671665 (+)
G44606 LOC107593190,LOC107696746,LOC107552261,LOC107753661,LOC107694109,LOC107752664 non-coding upstream 565217 12492953 ~ 12493642 (+)
G44604 NA non-coding upstream 576677 12477124 ~ 12482182 (+)
G44575 hdlbp,LOC107733253,LOC107694132,LOC107552253,LOC107696756,LOC107752661 non-coding upstream 1064722 11993558 ~ 11994137 (+)
G44615 NA non-coding downstream 18951 13083380 ~ 13084230 (+)
G44640 NA non-coding downstream 29427 13093856 ~ 13095910 (+)
LOC122346816 NA non-coding downstream 36850 13101279 ~ 13103566 (+)
G44872 NA non-coding downstream 249124 13313553 ~ 13313854 (+)
G44873 NA non-coding downstream 270760 13335189 ~ 13335542 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 253159 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 531902 12521773 ~ 12526957 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other upstream 898960 12154268 ~ 12159899 (+)
G44588 NA other upstream 966404 12087399 ~ 12092455 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other upstream 1048320 12002147 ~ 12010539 (+)
smx5 lsm2,LSM2,smx5 other downstream 16136 13080565 ~ 13082119 (+)
G44645 NA other downstream 44306 13108735 ~ 13109366 (+)
G44887 NA other downstream 329800 13394229 ~ 13409912 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 907744 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 2171736 15236165 ~ 15244280 (+)

Expression


Co-expression Network