LOC122346855 (LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634)


Basic Information

Item Value
gene id LOC122346855
gene name LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15246429 ~ 15256160 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241714.1
ATGGGAGCAACGCTGGCGGGCGTGTGTTTGGCGGCCGCAGGGATATGGGTGACAGTGGACGAAGATTCCTTTATGAAAGTTTTGCCACCCTTTACCGATGATTTCAAGAGTCATGTCAATGTAGGAATCTTCTGCATCACTATTGGAGCAGTTATGACACTGCTTGGACTGCTGGGGTGCTGTGGAGCTCAGAAAGAGAGCAAATGCCTTCTTATAACGTTCTTCTCCATCATCCTGATCATTTGCATTGCTGAGACAGCAGCCGCAATAGTAACCCTGGTCTATTCTCACactgaGATCATTCTAAAAACGTGGGCCACGCCTGGACTGAAGGTGCAGTATGGGAAAGATAAAATCTTCACAGACTTGTGGAACTCGACCATGACAACTCTGCAGTGCTGCGGCTTCAGCAACTACACAGACTTCTCTGAATCCTACTACTATAAGCAGAATGGGGACCTTTACCCTCCTACCTGTTGTGCAGGTCTTGAGCTCTTCCCCTGTGACGACGACAATGCAGATTTCAGTAATGTGGTGGGCTGTTACAAACAAATTGTAAAGAACATCCAGAGGAACGTCAAAATTGTGGGAGGAATAGCTGCTGGAGTCACTGCCATTGAGgTGGCAGCGATGGGGGTGTCTATGTACCTCTATTGCTACTTGGACAAAAAAGCCACCTGAAAGTCTCATCTTATAGTTTGTTATAATGTATATGCATCTTTTCTTTACGCTACAATGTTAGTTACTTTAAGTGTAGATAATACTGTAGATAT

Function

NR:

description
PREDICTED: tetraspanin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241714.1 True 773 mRNA 0.45 7 15246429 15256160

Neighbor

gene id symbol gene type direction distance location
adcyap1r1b adcyap1r1b,LOC107731652,LOC107717143,LOC107692394,LOC107594619 coding downstream 34448 15187162 ~ 15211981 (-)
LOC122346528 LOC107731631,LOC107704508 coding downstream 98344 15144790 ~ 15148085 (-)
LOC122346854 zc3h3,LOC107731631,LOC107556980,LOC107717141,LOC107692390,LOC107704522 coding downstream 125816 15092139 ~ 15120613 (-)
mafaa mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633 coding downstream 159863 15082218 ~ 15086566 (-)
usp1 usp1,LOC107591200,LOC107731620 coding downstream 283857 14957029 ~ 14962572 (-)
LOC122346434 pars2,LOC107659014,LOC107590619,LOC107591164,LOC107709182,LOC107738922,LOC107692369 coding upstream 75076 15331236 ~ 15333933 (-)
sgip1a sgip1,LOC107659047 coding upstream 88769 15344929 ~ 15394123 (-)
LOC122346414 uroc1 coding upstream 338203 15594363 ~ 15600846 (-)
LOC122346598 LOC107673517,LOC107711045,LOC107580698 coding upstream 345272 15601432 ~ 15603448 (-)
LOC122347277 endou coding upstream 435102 15691262 ~ 15695534 (-)
G45543 NA non-coding downstream 6789 15185152 ~ 15239640 (-)
G45532 NA non-coding downstream 91813 15102690 ~ 15154616 (-)
G45355 NA non-coding downstream 340721 14905502 ~ 14905708 (-)
LOC122346442 NA non-coding downstream 590398 14651716 ~ 14656031 (-)
G45277 NA non-coding downstream 752407 14493121 ~ 14494022 (-)
G45560 NA non-coding upstream 63225 15319385 ~ 15320034 (-)
G45579 NA non-coding upstream 226746 15482906 ~ 15484967 (-)
G45554 NA non-coding upstream 230503 15486663 ~ 15489101 (-)
LOC122347074 NA non-coding upstream 324424 15580584 ~ 15581055 (-)
LOC122347378 NA non-coding upstream 331346 15587506 ~ 15588222 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other downstream 1053263 14160475 ~ 14193166 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 1460526 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 1565135 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 2348711 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 4176963 11055035 ~ 11069466 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 71423 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 232958 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 279226 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 347750 15603910 ~ 15605470 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other upstream 500149 15756309 ~ 15765107 (-)

Expression


Co-expression Network