c6h22orf23 (LOC107716895,LOC107586342,LOC107688809)


Basic Information

Item Value
gene id c6h22orf23
gene name LOC107716895,LOC107586342,LOC107688809
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 8227424 ~ 8232954 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241719.1
ACAGGCCTAAATAAGgacactgatatatatatatattcacacactaaaaagtgagtaaataatagAACCAATGCTTGCTCTCTCATCGTTTCACGTGATTGGATGTTCATTGGAAACGTCACACTTTTTTGCCCGCGTCGCCTCAGGTCCTGGAGAGAAGAGGAACGTCACAGGATCGAAATAGGTGCTGAAATTGAATATAAATACGGAACTTTACAAAACTGCTGAATAAAGTCgaaatctttatttttcctCTCGAAAGCAAGTCTAAACACATTGCgcatgtgttttaatatattttttttatccgtGAGACTAATCTGCTTTGCTGGATCGAATGTTTTGCTTGTTACCATAGCAACTGCTCGGCTTTTATCCGTTCTTTTTTGAGTTCATTGCTCATTTCTTGTTTAAGTCAGgaACGATGGCCAGCGGATCAAAATATAAGGAGCCCAGAGTCAATCACTACAGAACCGAGACACAACAGTTAatacaaaTGATGATGCAGGAGTCTCGTCTAACAGACTTTCAGCAGAGGCAGATCAATAATAAGCTGAAAAATGGCGGCGCTCTTCCACTAACATTTAATCCCAGGCCGCTTGAGTCCAGTGTGCGGTCAGAGCCCACGCTCTCTAAAGGGCCCGCTCTGATTGGTCACCAGCACAGACGAAGCGCGGAAAGATGCCGCGCTGGAGATAACTACAAACGAGAGAGCTTCAAGCCCAGAGCAATACGAGATctagagaaagagaagagacagctacaaaatattttttctactgGTCAAAAGGATGTGAAGCCAACTTATTCCCAAAGAGATTCCACAGAGAGAAGAGAGCGACGGATAGATCGATTCCAAGAGGTTCTGGATGAGATTGAGGAGAGGAGGAAGTTTTTAGAGGACATGATGGCGTTGGGAAAAGGTCACCAATACCAGCACCTCATCAACACAGAGATATCCCAGaaAATCCGTGAACTTGAAGATATTGACAGGAAACGCAGCGAAGAGCTAAGCACCCTCAAGCTAGGCGGTGAAAAGGAACAGAGCAAAGAGAGGGAAAGACAAGtCTCAAACCAATTTTCTGGAGCAGTCAGAGTTGCCGACTTCTGCATCAGCGCTGAAACTATATAGTGCACTTACGTGTAGACCAGTTCAGCCTCTCTCCG
>XM_043241720.1
GACAGGCCTAAATAAGgacactgatatatatatatattcacacactaaaaagtgagtaaataatagAACCAATGCTTGCTCTCTCATCGTTTCACGTGATTGGATGTTCATTGGAAACGTCACACTTTTTTGCCCGCGTCGCCTCAGGTCCTGGAGAGAAGAGGAACGTCACAGGATCGAAATAGGTGCTGAAATTGAATATAAATACGGAACTTTACAAAACTGCTGAATAAAGTCgaaatctttatttttcctCTCGAAAGCAAGTCTAAACACATTGCgcatgtgttttaatatattttttttatccgtGAGACTAATCTGCTTTGCTGGATCGAATGTTTTGCTTGTTACCATAGCAACTGCTCGGCTTTTATCCGTTCTTTTTTGAGTTCATTGCTCATTTCTTGTTTAAGTCAGGTAACgaACGATGGCCAGCGGATCAAAATATAAGGAGCCCAGAGTCAATCACTACAGAACCGAGACACAACAGTTAatacaaaTGATGATGCAGGAGTCTCGTCTAACAGACTTTCAGCAGAGGCAGATCAATAATAAGCTGAAAAATGGCGGCGCTCTTCCACTAACATTTAATCCCAGGCCGCTTGAGTCCAGTGTGCGGTCAGAGCCCACGCTCTCTAAAGGGCCCGCTCTGATTGGTCACCAGCACAGACGAAGCGCGGAAAGATGCCGCGCTGGAGATAACTACAAACGAGAGAGCTTCAAGCCCAGAGCAATACGAGATctagagaaagagaagagacagctacaaaatattttttctactgGTCAAAAGGATGTGAAGCCAACTTATTCCCAAAGAGATTCCACAGAGAGAAGAGAGCGACGGATAGATCGATTCCAAGAGGTTCTGGATGAGATTGAGGAGAGGAGGAAGTTTTTAGAGGACATGATGGCGTTGGGAAAAGGTCACCAATACCAGCACCTCATCAACACAGAGATATCCCAGaaAATCCGTGAACTTGAAGATATTGACAGGAAACGCAGCGAAGAGCTAAGCACCCTCAAGCTAGGCGGTGAAAAGGAACAGAGCAAAGAGAGGGAAAGACAAGtCTCAAACCAATTTTCTGGAGCAGTCAGAGTTGCCGACTTCTGCATCAGCGCTGAAACTATATAGTGCACTTACGTGTAGACCAGTTCAGCCTCTCTCCG
>XM_043241722.1
GACAGGCCTAAATAAGgacactgatatatatatatattcacacactaaaaagtgagtaaataatagAACCAATGCTTGCTCTCTCATCGTTTCACGTGATTGGATGTTCATTGGAAACGTCACACTTTTTTGCCCGCGTCGCCTCAGGTCCTGGAGAGAAGAGGAACGTCACAGGATCGAAATAGCAACTGCTCGGCTTTTATCCGTTCTTTTTTGAGTTCATTGCTCATTTCTTGTTTAAGTCAGgaACGATGGCCAGCGGATCAAAATATAAGGAGCCCAGAGTCAATCACTACAGAACCGAGACACAACAGTTAatacaaaTGATGATGCAGGAGTCTCGTCTAACAGACTTTCAGCAGAGGCAGATCAATAATAAGCTGAAAAATGGCGGCGCTCTTCCACTAACATTTAATCCCAGGCCGCTTGAGTCCAGTGTGCGGTCAGAGCCCACGCTCTCTAAAGGGCCCGCTCTGATTGGTCACCAGCACAGACGAAGCGCGGAAAGATGCCGCGCTGGAGATAACTACAAACGAGAGAGCTTCAAGCCCAGAGCAATACGAGATctagagaaagagaagagacagctacaaaatattttttctactgGTCAAAAGGATGTGAAGCCAACTTATTCCCAAAGAGATTCCACAGAGAGAAGAGAGCGACGGATAGATCGATTCCAAGAGGTTCTGGATGAGATTGAGGAGAGGAGGAAGTTTTTAGAGGACATGATGGCGTTGGGAAAAGGTCACCAATACCAGCACCTCATCAACACAGAGATATCCCAGaaAATCCGTGAACTTGAAGATATTGACAGGAAACGCAGCGAAGAGCTAAGCACCCTCAAGCTAGGCGGTGAAAAGGAACAGAGCAAAGAGAGGGAAAGACAAGtCTCAAACCAATTTTCTGGAGCAGTCAGAGTTGCCGACTTCTGCATCAGCGCTGAAACTATATAGTGCACTTACGTGTAGACCAGTTCAGCCTCTCTCCG

Function

NR:

description
PREDICTED: UPF0193 protein EVG1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241719.1 False 1167 mRNA 0.44 8 8227424 8232953
XM_043241720.1 True 1173 mRNA 0.44 8 8227424 8232954
XM_043241722.1 False 994 mRNA 0.46 9 8227424 8232954

Neighbor

gene id symbol gene type direction distance location
psmd12 psmd12,LOC107688808,LOC107694910 coding downstream 20632 8202979 ~ 8206792 (-)
cacng4a LOC107688901,LOC107586376,LOC107716888 coding downstream 24583 8199111 ~ 8202841 (-)
cacng1a cacng1a,cacng1,LOC107586374,LOC107688902,LOC107716892,LOC107569457 coding downstream 39040 8183015 ~ 8188384 (-)
inha inha,LOC107731770,LOC107688903,LOC107719299,LOC107694906,LOC107569459,LOC107586362 coding downstream 211665 8013125 ~ 8015759 (-)
LOC122347101 igfbp2,igfbp2a,LOC107731775,LOC107688817,LOC107719297,LOC107663074,LOC108438161 coding downstream 247335 7965748 ~ 7980089 (-)
ppp1r12c ppp1r12c,LOC107688807,LOC107586341,LOC107710164,LOC107569470 coding upstream 781 8233735 ~ 8246233 (-)
si:dkey-43k4.5 si:dkey-43k4.5,LOC107716889,LOC107586377,LOC107688900,LOC107569460,LOC107710151,LOC107694904 coding upstream 21083 8254037 ~ 8282084 (-)
mtmr14 mtmr14,LOC107716897,LOC107710166,LOC107569464 coding upstream 62346 8295300 ~ 8305587 (-)
setd5 LOC107710169,LOC107716898,LOC107656119 coding upstream 113807 8346761 ~ 8374675 (-)
si:dkey-19e4.5 si:dkey-19e4.5,LOC107586347,LOC107562898,LOC107710172,LOC103025619,LOC108427613,LOC108272187 coding upstream 141858 8374812 ~ 8379041 (-)
G43660 NA non-coding downstream 44542 8182679 ~ 8182882 (-)
G43513 LOC107688815 non-coding downstream 176746 8049397 ~ 8050678 (-)
G43528 NA non-coding downstream 369828 7856465 ~ 7857596 (-)
G43516 NA non-coding downstream 427727 7798124 ~ 7799697 (-)
G43478 NA non-coding downstream 728989 7461191 ~ 7498435 (-)
G43691 NA non-coding upstream 61100 8294054 ~ 8294286 (-)
G43697 NA non-coding upstream 81469 8314423 ~ 8314623 (-)
G43700 NA non-coding upstream 101408 8334362 ~ 8343514 (-)
G43709 NA non-coding upstream 216184 8449138 ~ 8450686 (-)
G43712 NA non-coding upstream 217833 8450787 ~ 8452319 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other downstream 179416 8047102 ~ 8048008 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other downstream 456973 7737090 ~ 7770451 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other downstream 641057 7579895 ~ 7586367 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 897859 7316947 ~ 7329565 (-)
LOC122346787 unc80,LOC107733373,LOC107677624,LOC107688825 other downstream 912650 7274840 ~ 7314774 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other upstream 475752 8708706 ~ 8713858 (-)
G43890 NA other upstream 1027662 9260616 ~ 9261245 (-)
G43896 NA other upstream 1033048 9266002 ~ 9267324 (-)
G43899 NA other upstream 1036234 9269188 ~ 9270922 (-)
G43900 NA other upstream 1038464 9271418 ~ 9272305 (-)

Expression


Co-expression Network