acox1 (acox1)


Basic Information

Item Value
gene id acox1
gene name acox1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 8933083 ~ 8951173 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241776.1
AAGTAACAAACCCCCAGTAGGCCAGAGTTGAAACGTTATacaacaaaatcaataaaagctCACCAAGCAGAAGGGACGTCGTCCAGAAGAAAGTCCAACGGAATAGTCATGAATCCTGATATTAGACGAGAGCGCGAAAATGCGTCTTTTAATCCAGAAATCCTTACGAATACACTAGATGGGGGTGCAGAAAAGACACGCAGGAGGAGAGAAATAGAGTCTTTAGTTATTGGTGATCCCGACTTTCAGCATGAAGACCTGAACTTCCTCTCCCGCAGTGAGAGATACGATGCAGCAGTGCAGAAGAGTGCTCAGATGATTCTGAAGATTAGGGAATATGGTATCTCTGATCCAGAGGAGATCTACGCTTACAAGAGTATTGTGAGGGGTGTGTATCAAGAACCCTTAGGTCTCCATTTTGTCATGTTCATACCCACCTTAAACAGCCAGTGCACAGCTGAACAGCGCAAAAAATGGATCCCATTAGCCGAGTCATTCCATATGTTAGGCACCTATGCTCAGACAGAGCTGGGGCACGGCACACACATCCGTGGTCTTGAAACAACTGCTACATACGACCCTTCCACCCAAGAATTTGTTTTGAACAGTCCAACAATCTCTTCTATTAAATGGTGGCCAGGTGGATTGGGTAAAACCTCAAATCATGCTATAGTCCTGGCTCAGCTGTACACGCAGGGCAAGTGTCATGGCCTACATGCCTTTATCACACCCATTCGCTGTATGAAGACACACATGCCACTGCCAGGTGTGGTCGTTGGTGATATTGGCCCAAAATTTGGTTTTGATGAGGTGGATAATGGATACTTGAAACTGGAAAATGTCAGGATTCCACGTGAGAATATGTTGATGAAATATGCCAAGGTTGAGCCGGACGGGTCTTACGTGAAGCCTCCTAGTGATAAACTCACATATGGCACCATGGTGTTTATTCGCTCAATGATCGTGGGGGAGTCCGCACGAGCTCTCTCCAAGTCCTGCACCATTGCCATTCGTTACAGTGCAGTCCGACACCAGTCTGAACTACGGCAAGGagAGCCAGAGCCACAGATCCTAGACTATCAGACCCAGCAGTATAAACTCTTTCCTCTGCTGGCCACTGCCTATGCCTTCCACTTTGTGGGGCAATACATGAGTAAAACATATCATCGCATCACAGGAGACATTAATCAGGGTGACTTCAGTGGACTGCCAGAGCTACATGCTCTATCTGCAGGTCTGAAAGCTTTTACCACCTGGGTGGCCAATGCAGGAATTGAGGTTTGTCGCATGTCGTGTGGTGGTCACGGTTACTCCCGCTGCAGCAGTTTACCTGACATCTATGTCACCTTTACACCGACCTGCACTTATGAGGGGGAGAATACTGTTATGATGCTGCAGACagctagGTTTTTACTGAAGAGCTACAAACAAGCACGGGCAGGTCAGCAGTTGACGGGCATTGTTTCTTACCTGAATGAACCTCAGACGAGGATACAGCCCCACTCCGTGTCCTCCCGGCCCACTGTTGTTAATATCAATGACCTGGCCAGCCTCGTGGAGGCATACAAATACAGAGCTGCCAAGTTAGTTGAAATGGCAGCTAAGAACCTCCAGGTGGAGCTACAGCACAGCAAGAGTAATGAAGACGCCTGGAACAACAGTTCCATTGATCTAGTCCGAGCATCTGATGCACACTGTCATTATGTGGTGGTAAAgctgtttgctgctaaactcAGTGAGATTGGGGATACTGCTGTCCACTCAGTGCTCAGCACTTTGGCTCTGCTTTATGCTCTTCATGGAGTTGCACTGAACTCTGGAGACTTTTTACAGgCTGGTCTGCTAACTGTTCCTCAGCTGGCTCAGATCTCACAGAGGCTGAAGGATCTTCTCTCAGAGATAAGGCCCAACGCAGTGGCTTTGGTTGATGCCTTTGACTACCGTGATGAGATGCTTAATTCTGCTCTGGGAAGATACGATGGCAACGTCTATGAGCACATGTTTGAGTGGGCCAAGAGGTCGCCTCTGAACCATACTGAGGTACATGAGTCCCACCACAAGTACCTAAAGCCACTACAGTCCAAACTGTAAGAAGTGCCTTTATTGGAGAAAGGGAAGAGTCTGTCCaagaaaaataatactgttaGCTCTCCTGTCCACCACCACTGGGTTTTCTGGTCATCTACTGTAGAAAATGAATTTGTCAgtaaagaaattatattaatttttaaaggatATGGTTCTATGCCTAATTCTAATTATTTAGAGCAGTAAGTCATGATTGCTTACTTTGTGCACTTAATGATCATTTCAAGTTAAATCACTTagattactttttgtaattgtataaattgtattcatttttgctTAATTGGTTTTTCTACAGGATTTAAGGTTACAATAAACTGATGGTTTATGATGCTTCAGATtctaaaagctgaaattaagagactatatttaaataaattctcaaTTCTCTGTGTGACAAACTTGAAATGCACAACGTGAATATTgcacaatgaataaataatgtttgagtttaaaatgattaattactaaataatgaatcatttgactTCTCAGCATCTCTTAAAATCATGCCTTAAGATCCTCAGACAGgaatcttttatttcattttctttttatttcttttgtagcGACAGTCAGAATTATTGTGCAGTATTAGTGTCATTCCATTGCAGTTATTTACACCATTTACATAGTCATCTACTAATTTGTGTcctgatttttttctgttgttatttCAACTTTTATGCTACattaataaaggaataaattaacACTTACAGCAGTGTTTAAATAGCATTTCACTTACATTTATGAATGTGGTCTCGCGATTTGCATGTCTGATTACAATTCAAAGATACAATTGTTGtagtacaatgtttttttttttcacctttcttccaaacctaataaaaaatgaattcagaa
>XM_043241777.1
AAGTAACAAACCCCCAGTAGGCCAGAGTTGAAACGTTATacaacaaaatcaataaaagctCACCAAGCAGAAGGGACGTCGTCCAGAAGAAAGTCCAACGGAATAGTCATGAATCCTGATATTAGACGAGAGCGCGAAAATGCGTCTTTTAATCCAGAAATCCTTACGAATACACTAGATGGGGGTGCAGAAAAGACACGCAGGAGGAGAGAAATAGAGTCTTTAGTTATTGGTGATCCCGACTTTCAGCATGAAGACCTGAACTTCCTCTCCCGCAGTGAGAGATACGATGCAGCAGTGCAGAAGAGTGCTCAGATGATTCTGAAGATTAGGGAATATGGTATCTCTGATCCAGAGGAGATCTACGCTTACAAGAGCTGTGTGCACCGGGGGCGTCCAGAACCCCTTGACCTGCACTTGGGTATGTTCCTGCCGACGCTGTTGAACCAATCCTCCCCTGCACAACTGGACGCTTTCTTCATGCCAGCATGGAACTTGGAGATAATTGGCACCTACGCGCAGACTGAGATGGGGCACGGCACACACATCCGTGGTCTTGAAACAACTGCTACATACGACCCTTCCACCCAAGAATTTGTTTTGAACAGTCCAACAATCTCTTCTATTAAATGGTGGCCAGGTGGATTGGGTAAAACCTCAAATCATGCTATAGTCCTGGCTCAGCTGTACACGCAGGGCAAGTGTCATGGCCTACATGCCTTTATCACACCCATTCGCTGTATGAAGACACACATGCCACTGCCAGGTGTGGTCGTTGGTGATATTGGCCCAAAATTTGGTTTTGATGAGGTGGATAATGGATACTTGAAACTGGAAAATGTCAGGATTCCACGTGAGAATATGTTGATGAAATATGCCAAGGTTGAGCCGGACGGGTCTTACGTGAAGCCTCCTAGTGATAAACTCACATATGGCACCATGGTGTTTATTCGCTCAATGATCGTGGGGGAGTCCGCACGAGCTCTCTCCAAGTCCTGCACCATTGCCATTCGTTACAGTGCAGTCCGACACCAGTCTGAACTACGGCAAGGagAGCCAGAGCCACAGATCCTAGACTATCAGACCCAGCAGTATAAACTCTTTCCTCTGCTGGCCACTGCCTATGCCTTCCACTTTGTGGGGCAATACATGAGTAAAACATATCATCGCATCACAGGAGACATTAATCAGGGTGACTTCAGTGGACTGCCAGAGCTACATGCTCTATCTGCAGGTCTGAAAGCTTTTACCACCTGGGTGGCCAATGCAGGAATTGAGGTTTGTCGCATGTCGTGTGGTGGTCACGGTTACTCCCGCTGCAGCAGTTTACCTGACATCTATGTCACCTTTACACCGACCTGCACTTATGAGGGGGAGAATACTGTTATGATGCTGCAGACagctagGTTTTTACTGAAGAGCTACAAACAAGCACGGGCAGGTCAGCAGTTGACGGGCATTGTTTCTTACCTGAATGAACCTCAGACGAGGATACAGCCCCACTCCGTGTCCTCCCGGCCCACTGTTGTTAATATCAATGACCTGGCCAGCCTCGTGGAGGCATACAAATACAGAGCTGCCAAGTTAGTTGAAATGGCAGCTAAGAACCTCCAGGTGGAGCTACAGCACAGCAAGAGTAATGAAGACGCCTGGAACAACAGTTCCATTGATCTAGTCCGAGCATCTGATGCACACTGTCATTATGTGGTGGTAAAgctgtttgctgctaaactcAGTGAGATTGGGGATACTGCTGTCCACTCAGTGCTCAGCACTTTGGCTCTGCTTTATGCTCTTCATGGAGTTGCACTGAACTCTGGAGACTTTTTACAGgCTGGTCTGCTAACTGTTCCTCAGCTGGCTCAGATCTCACAGAGGCTGAAGGATCTTCTCTCAGAGATAAGGCCCAACGCAGTGGCTTTGGTTGATGCCTTTGACTACCGTGATGAGATGCTTAATTCTGCTCTGGGAAGATACGATGGCAACGTCTATGAGCACATGTTTGAGTGGGCCAAGAGGTCGCCTCTGAACCATACTGAGGTACATGAGTCCCACCACAAGTACCTAAAGCCACTACAGTCCAAACTGTAAGAAGTGCCTTTATTGGAGAAAGGGAAGAGTCTGTCCaagaaaaataatactgttaGCTCTCCTGTCCACCACCACTGGGTTTTCTGGTCATCTACTGTAGAAAATGAATTTGTCAgtaaagaaattatattaatttttaaaggatATGGTTCTATGCCTAATTCTAATTATTTAGAGCAGTAAGTCATGATTGCTTACTTTGTGCACTTAATGATCATTTCAAGTTAAATCACTTagattactttttgtaattgtataaattgtattcatttttgctTAATTGGTTTTTCTACAGGATTTAAGGTTACAATAAACTGATGGTTTATGATGCTTCAGATtctaaaagctgaaattaagagactatatttaaataaattctcaaTTCTCTGTGTGACAAACTTGAAATGCACAACGTGAATATTgcacaatgaataaataatgtttgagtttaaaatgattaattactaaataatgaatcatttgactTCTCAGCATCTCTTAAAATCATGCCTTAAGATCCTCAGACAGgaatcttttatttcattttctttttatttcttttgtagcGACAGTCAGAATTATTGTGCAGTATTAGTGTCATTCCATTGCAGTTATTTACACCATTTACATAGTCATCTACTAATTTGTGTcctgatttttttctgttgttatttCAACTTTTATGCTACattaataaaggaataaattaacACTTACAGCAGTGTTTAAATAGCATTTCACTTACATTTATGAATGTGGTCTCGCGATTTGCATGTCTGATTACAATTCAAAGATACAATTGTTGtagtacaatgtttttttttttcacctttcttccaaacctaataaaaaatgaattcagaa
>XM_043241778.1
TTTCAGCATGAAGACCTGAACTTCCTCTCCCGCAGTGAGAGATACGATGCAGCAGTGCAGAAGAGTGCTCAGATGATTCTGAAGATTAGGGAATATGGTATCTCTGATCCAGAGGAGATCTACGCTTACAAGAGTATTGTGAGGGGTGTGTATCAAGAACCCTTAGGTCTCCATTTTGTCATGTTCATACCCACCTTAAACAGCCAGTGCACAGCTGAACAGCGCAAAAAATGGATCCCATTAGCCGAGTCATTCCATATGTTAGGCACCTATGCTCAGACAGAGCTGGGGCACGCTGTGTGCACCGGGGGCGTCCAGAACCCCTTGACCTGCACTTGGGTATGTTCCTGCCGACGCTGTTGAACCAATCCTCCCCTGCACAACTGGACGCTTTCTTCATGCCAGCATGGAACTTGGAGATAATTGGCACCTACGCGCAGACTGAGATGGGGCACGGCACACACATCCGTGGTCTTGAAACAACTGCTACATACGACCCTTCCACCCAAGAATTTGTTTTGAACAGTCCAACAATCTCTTCTATTAAATGGTGGCCAGGTGGATTGGGTAAAACCTCAAATCATGCTATAGTCCTGGCTCAGCTGTACACGCAGGGCAAGTGTCATGGCCTACATGCCTTTATCACACCCATTCGCTGTATGAAGACACACATGCCACTGCCAGGTGTGGTCGTTGGTGATATTGGCCCAAAATTTGGTTTTGATGAGGTGGATAATGGATACTTGAAACTGGAAAATGTCAGGATTCCACGTGAGAATATGTTGATGAAATATGCCAAGGTTGAGCCGGACGGGTCTTACGTGAAGCCTCCTAGTGATAAACTCACATATGGCACCATGGTGTTTATTCGCTCAATGATCGTGGGGGAGTCCGCACGAGCTCTCTCCAAGTCCTGCACCATTGCCATTCGTTACAGTGCAGTCCGACACCAGTCTGAACTACGGCAAGGagAGCCAGAGCCACAGATCCTAGACTATCAGACCCAGCAGTATAAACTCTTTCCTCTGCTGGCCACTGCCTATGCCTTCCACTTTGTGGGGCAATACATGAGTAAAACATATCATCGCATCACAGGAGACATTAATCAGGGTGACTTCAGTGGACTGCCAGAGCTACATGCTCTATCTGCAGGTCTGAAAGCTTTTACCACCTGGGTGGCCAATGCAGGAATTGAGGTTTGTCGCATGTCGTGTGGTGGTCACGGTTACTCCCGCTGCAGCAGTTTACCTGACATCTATGTCACCTTTACACCGACCTGCACTTATGAGGGGGAGAATACTGTTATGATGCTGCAGACagctagGTTTTTACTGAAGAGCTACAAACAAGCACGGGCAGGTCAGCAGTTGACGGGCATTGTTTCTTACCTGAATGAACCTCAGACGAGGATACAGCCCCACTCCGTGTCCTCCCGGCCCACTGTTGTTAATATCAATGACCTGGCCAGCCTCGTGGAGGCATACAAATACAGAGCTGCCAAGTTAGTTGAAATGGCAGCTAAGAACCTCCAGGTGGAGCTACAGCACAGCAAGAGTAATGAAGACGCCTGGAACAACAGTTCCATTGATCTAGTCCGAGCATCTGATGCACACTGTCATTATGTGGTGGTAAAgctgtttgctgctaaactcAGTGAGATTGGGGATACTGCTGTCCACTCAGTGCTCAGCACTTTGGCTCTGCTTTATGCTCTTCATGGAGTTGCACTGAACTCTGGAGACTTTTTACAGgCTGGTCTGCTAACTGTTCCTCAGCTGGCTCAGATCTCACAGAGGCTGAAGGATCTTCTCTCAGAGATAAGGCCCAACGCAGTGGCTTTGGTTGATGCCTTTGACTACCGTGATGAGATGCTTAATTCTGCTCTGGGAAGATACGATGGCAACGTCTATGAGCACATGTTTGAGTGGGCCAAGAGGTCGCCTCTGAACCATACTGAGGTACATGAGTCCCACCACAAGTACCTAAAGCCACTACAGTCCAAACTGTAAGAAGTGCCTTTATTGGAGAAAGGGAAGAGTCTGTCCaagaaaaataatactgttaGCTCTCCTGTCCACCACCACTGGGTTTTCTGGTCATCTACTGTAGAAAATGAATTTGTCAgtaaagaaattatattaatttttaaaggatATGGTTCTATGCCTAATTCTAATTATTTAGAGCAGTAAGTCATGATTGCTTACTTTGTGCACTTAATGATCATTTCAAGTTAAATCACTTagattactttttgtaattgtataaattgtattcatttttgctTAATTGGTTTTTCTACAGGATTTAAGGTTACAATAAACTGATGGTTTATGATGCTTCAGATtctaaaagctgaaattaagagactatatttaaataaattctcaaTTCTCTGTGTGACAAACTTGAAATGCACAACGTGAATATTgcacaatgaataaataatgtttgagtttaaaatgattaattactaaataatgaatcatttgactTCTCAGCATCTCTTAAAATCATGCCTTAAGATCCTCAGACAGgaatcttttatttcattttctttttatttcttttgtagcGACAGTCAGAATTATTGTGCAGTATTAGTGTCATTCCATTGCAGTTATTTACACCATTTACATAGTCATCTACTAATTTGTGTcctgatttttttctgttgttatttCAACTTTTATGCTACattaataaaggaataaattaacACTTACAGCAGTGTTTAAATAGCATTTCACTTACATTTATGAATGTGGTCTCGCGATTTGCATGTCTGATTACAATTCAAAGATACAATTGTTGtagtacaatgtttttttttttcacctttcttccaaacctaataaaaaatgaattcagaa

Function

symbol description
acox1 Predicted to enable fatty acid binding activity; flavin adenine dinucleotide binding activity; and palmitoyl-CoA oxidase activity. Predicted to be involved in fatty acid beta-oxidation using acyl-CoA oxidase; lipid homeostasis; and very long-chain fatty acid metabolic process. Predicted to act upstream of or within fatty acid beta-oxidation. Predicted to be active in peroxisome. Is expressed in several structures, including female organism; heart; immature eye; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in peroxisomal acyl-CoA oxidase deficiency. Orthologous to human ACOX1 (acyl-CoA oxidase 1).

NR:

description
peroxisomal acyl-coenzyme A oxidase 1-like isoform X2

GO:

id name namespace
GO:0006635 fatty acid beta-oxidation biological_process
GO:0005777 peroxisome cellular_component
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function
GO:0003997 acyl-CoA oxidase activity molecular_function

KEGG:

id description
K00232 E1.3.3.6, ACOX1, ACOX3; acyl-CoA oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241776.1 False 2955 mRNA 0.42 14 8933083 8951173
XM_043241777.1 True 2955 mRNA 0.43 14 8933083 8951173
XM_043241778.1 False 2873 mRNA 0.43 14 8933083 8950424

Neighbor

gene id symbol gene type direction distance location
LOC122347059 rhbdf2 coding downstream 650 8886508 ~ 8932433 (-)
ube2o ube2o,LOC100331775 coding downstream 49919 8857534 ~ 8883164 (-)
si:dkey-45d16.4 si:dkey-45d16.4,LOC107681484,LOC107569613,LOC107711600,LOC108424794,LOC103024355,LOC108273264 coding downstream 383844 8547278 ~ 8549239 (-)
LOC122346602 NA coding downstream 408090 8506768 ~ 8524993 (-)
nprl2 nprl2 coding downstream 431815 8496635 ~ 8501268 (-)
evpla evpl,LOC107742557 coding upstream 4083 8955256 ~ 8967380 (-)
srp68 srp68 coding upstream 20501 8971674 ~ 8995633 (-)
nol11 nol11,LOC107567930,LOC107734779,LOC107728513,LOC107660301 coding upstream 332230 9283403 ~ 9299043 (-)
si:dkey-237i9.1 LOC107567927,LOC107667603,LOC107591922,LOC107667296,LOC107731096,LOC108272757,LOC108424802 coding upstream 357413 9308586 ~ 9352668 (-)
LOC122346819 rptor,LOC107553319 coding upstream 635252 9586425 ~ 9710598 (-)
G43791 NA non-coding downstream 138343 8599796 ~ 8794740 (-)
G43800 NA non-coding downstream 225109 8706786 ~ 8707974 (-)
G43739 NA non-coding downstream 386520 8546353 ~ 8546563 (-)
G43734 NA non-coding downstream 436450 8495764 ~ 8496633 (-)
G43719 LOC108424762,LOC107710154,LOC107562891,LOC556764 non-coding downstream 466437 8460906 ~ 8466646 (-)
G43855 NA non-coding upstream 71346 9022519 ~ 9022881 (-)
G43856 NA non-coding upstream 74035 9025208 ~ 9025429 (-)
G43881 NA non-coding upstream 299526 9250699 ~ 9251679 (-)
G43880 NA non-coding upstream 300813 9251986 ~ 9253068 (-)
G43884 NA non-coding upstream 304553 9255726 ~ 9256009 (-)
G43801 pick1,LOC107734822,LOC107734770,LOC107572282 other downstream 219225 8708706 ~ 8713858 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other downstream 885075 8047102 ~ 8048008 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other downstream 1162632 7737090 ~ 7770451 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other downstream 1346716 7579895 ~ 7586367 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other downstream 1603518 7316947 ~ 7329565 (-)
G43890 NA other upstream 309443 9260616 ~ 9261245 (-)
G43896 NA other upstream 314829 9266002 ~ 9267324 (-)
G43899 NA other upstream 318015 9269188 ~ 9270922 (-)
G43900 NA other upstream 320245 9271418 ~ 9272305 (-)
anapc11 anapc11,LOC107553313 other upstream 994494 9945667 ~ 9948988 (-)

Expression


Co-expression Network