inpp5d (LOC107694111,LOC107590654,LOC107717933,LOC107696774,LOC107552268,LOC107752650)


Basic Information

Item Value
gene id inpp5d
gene name LOC107694111,LOC107590654,LOC107717933,LOC107696774,LOC107552268,LOC107752650
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13065838 ~ 13080046 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241810.1
TTCACCCTTGTGTTTGTAGCAGCTTCCTTTTTGCAGCTTTCGCCCCTCtaacaggaagagagagaaacagcgAGCCTAGAGCCAGACAGAGCAGGAACGGCTATCAGTTCTAACAACGCCATGAAACAAATCGTGAGACTCTGAAGGTGGCCTCATGTTGATCTGCTCTTGAAAACTTGCCGGGGACAAAAAAACCTGGGTGTCTTCAGATTGAGGAAGGGAAAAGTCTTTGAAAAGGATGTTTTCTCACCAGCCATGGTACCATGGCAATATCACTCGGTCTACAGCAGAGGACCTCCTCTCCAAAGCAGGCAAGGATGGGAGCTTCCTCCTGCGGGACAGCGAATCTATACAGGGAGCTTATGCCCTCTGTGTTCTGTACCAAAACTGTGTGTATACCTACAGAATATTACCAAACGAGGATAAAAAACTATCAGTCCAGGCATCAGAAGGTGTTCCTATTCGGTTCTTCTCCGTGCTGCCAGATCTGGTGGAGGCGTATTATAAGGAGAACATGGGTCTGGTCACACATCTTCAGTATTCTGTGCAGAAAGAGGAGGAGCCGGAGGAGGAACCAGAGCCGGTTAGTTTGCCGCCTCAGTTGCCACCGAGGAATATTGCCAGTAACGAATGTAAAGACAGCCATAGTGACTCATCCAGAGGAACCGAGAGAGGAACAGAGCTTGCCCGCCTCTCCATCTCAGACACCTATATACAGCGTTTGCAGCAAATTGACATATCAAACCTACCAGAAGACCATCAGAAGTCCATCCAGGAGTATTTCTGCTCTTCTGTGTGTCTGGATGCAGAGCAGGTGCAGAATGGCAACCCGACTCTACCCCACTTTAAAAAGCTCACACTTAGCATTTGCAAAAACCTAAACAGTGAAATCGCCCGCACACTTCCGAGTCTTGAGGCACTGCAGAAAGTTTTGGATCAACCGCAGTCTCCTGGAGCTGGGAGGCTAAGGAGTCAGcctTGTGGAGATGCAAATCAGTCTGTGGCTTTTAAACTGGAGCAACTGACTAAGCTTATATATTCAATAGAAGACAAGACCAAGAATGCGGTGTTTGAATCTGTGGGATATGATGGAGGACACAGAAAGTCGCTTATTCCTCCTGTGATATTCGAAGTAAAATGCGACTCCCTTggtatttcaaacaaaatgtaCCTCAAAGTAGATGTCGAAGGTGGGAAGGTTTACTTCAAGAAGTCAAAAGATGGACCTGAggataaatattttgtacacaATAAAATCTTGCAGTTGGTGAAATCACAGAAGATTCACAACAGACTAGCGCTGGTGGTGGAGACAGAGAAGGAAAAAACTCAGCGCAAAGACTTTGTCTTTGACGACACAAAGaaaagagaAGGCTTCTGTCAGCTTCTGCAGCAGATGAAGAACAAGCACTCAGGAAAACCTGAGCCGGATATGATCACCATTTTTGTTGGCACCTGGAACATGGGAAACGCGAATCCACCGAACAACATCACTTCCTGGTTCCAGTCAAAGGGTCAGGGAAAAACCCACGATGACACGGCCAATCAAATCCCACATGACATCTACGTGATTGGGACACAGGAGGACCCGCTGGGAGAGAAGGAATGGATAGAAACAGTTAGAGGAGCCCTTAGAGATATAACCAACATTAGCTTCAAACAAATAGCTGCTCAGACGCTGTGGAGTATAAGGATTGTGGTTCTCGCCAAACCGGAACACGAGAACCGCTTCTCTCATGTCTTCTGTGACAGTGTTAAGACTGGCATAGCTAACGCTCTGGGGAATAAAGGAGCAGTGGGGGtgtcttttatgtttaataGAACCTCCTTTGGGTTTGTCAACAGTCACCTGACCTCAGGAAGCGAAAAGAAGCTGAGACGAAACCAGAACTATGTCAGCATCCTGCGTTTTCTGAATCTGGGAGATAAGAAAGTGAATCCCTTTGACATCACACATCGCTTCACACACCTCTTCTGGCTGGGGGATCTGAATTATAGGGTTGAATTACCATCACAGGAAGCCGAGAACATTGTATTGAAGATCAAACAGCAGCAGTATCAGGAACTCCTAACCAATGATCAGCTGAACAtagagaggaaagagaagaaGGTCTTCTTAGACTACGaggaggaggagataaCATTTGCTCCCACTTATCGTTTTGAGAGAGACACACGGGAGAGATATGCCTACACTAAAGCTAAAGCCACAGGGacaaaatacaACTTGCCTTCATGGTGCGATCGAGTGCTTCGCAAGTCCTACCCTATGGCGCACGTGGTTTGCAACTCATATGGATGCACTAATGACATCATGACAAGTGACCATTCCCCTGTATTTGCCACATTTGACGTTGGTGTGACTTCTCAGTTTGTCTCCAAAAATGATCTCTCAAAAGATGCTCAGGGAGCTATAAAAATCATGAACTGCGTGGCTGATCTTCATACTAAATCCAAAACCAAGTTCTTCATTGAGTACCACTCAAGCTGCTTGGAGAAATTTGTAAAGAGTCCAGAAGGAGAAAACCAAGAGTACAAAGATAGCCCGATAAAAGTACGGTTTAACGGACAAGTTGAGCTCACCCCCATCATTGCAGACCCAGAATACCTGCTTGATCAGCACATTCTGATCTGCATTAAATCTACAGACTGTGATGAGTCGTATGGCGAGGGTTGTGTGGCCCTGCGTTCTGCTGAAAGCTCTTACACTGAGTTCTGCATCAAACTCACACATCACGGTGAGTGCACAGGTCAGCTAACAGGTGGCATTCAACTTCCCAAATCTGACGGAAAACAGACAGAGAAGCTGTATGATTTCATCAAAGTCGGAGATGACCCAGGAACTGGTAAAGGCAAATCAGGAGACAATACCAAAATGTCTCCTTCGGTCCTCGCCACTGATATTAGTAACCCCAGTTATATGGGTTTAGGCTACAAGAGCAATAACCAGGCAGACAGGGGCCCCGGCAACATTATTTCTCAGAGAACGGGGCCATCCTCAAAAAGCATGACGCATGGCAATCTCTCCCCTAAAAAGAGTAGTTATGAGCATACTACATCCAGCCCAACTACAAAGACATCAAACCCTATATCCGAGGATGGGCAGCCTCCAGAGATGTTTGACAATCCTCTCTACGGCTCGATGAGTTCATCGCGAGGAAATAAAGACCACCTCCCTCCTCCAGAGGCTCACTTCTCCTTTCCCAAAACAGACCTCGATGTTGACCGCCAGCACCCTGTTCCGACCCCTCGCTTCCGCTCTTTCACCTGTTCAGAAACCAAACCCCAGTCACCATCAGTCACAAACATGAGCAGTAGTCTACTACCCCAGAACATCACCAAGAAGCCAGTGGTGCCTTCTCGCTCTGAAGGGGGCACGACTGGGCCTAACAGACCTCCGGTGCCTATGAAGTCTCGCCCCGGTCAGCCGCAAGAGTTTCAACCAAAGCCCAGAGACTACAGAGAAAGCTCTGAGCTTCCGTCTAAGTTACGCCAACAAACCAGACAAGGCCAACCCAAAGACGGGCATCATGAGACACAACAGTCACAGCTGAAGATGGGTCGgccattaaaatgattttctgctGAAGTATGGTGGCAGCAGAGCTGTCTGCGCTGGTGTGAGCTGATACTTGACACTCTGTAGTACTGGCCATTAGACATAAGCTTCTTTATCTCTGAGtactaaaatgaattaatgtataaatgatgaatattgattttaaaatgatgaatgttTCACAGTTTGAATGTCACTGCAGTAATACATCGATCAATCATTTCTGTTAGCTtctgtttaaacatttcatgttgcttaaaacattttcattagagAGAAGATTGAAGATTTCTAATCATATAATAAAACCAAGTGTTGTACAGTC

Function

NR:

description
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1-like

GO: NA

KEGG:

id description
K03084 SHIP1, INPP5D; phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241810.1 True 3884 mRNA 0.46 27 13065838 13080046

Neighbor

gene id symbol gene type direction distance location
gpr17 gpr17,LOC107752663,LOC107717943,LOC107694121,LOC107590682,LOC107552259,LOC107696754 coding upstream 1409 13058859 ~ 13064429 (+)
LOC122346752 LOC107590657,LOC107694127,LOC107717944,LOC107696773,LOC107752637,LOC107552269 coding upstream 7717 13039523 ~ 13058121 (+)
sap130a sap130a,LOC107696772,LOC107590658,LOC107717942,LOC107552246 coding upstream 27558 13024547 ~ 13038280 (+)
amotl2a amotl2a,LOC107717938,LOC107694113,LOC107752638,LOC107590659,LOC107696770,LOC107552270 coding upstream 51437 13004991 ~ 13014401 (+)
cep63 cep63,LOC107590660,LOC107694114,LOC107552272 coding upstream 84309 12972091 ~ 12981529 (+)
LOC122346939 lpp,LOC107684332,LOC107590653,LOC107717931,LOC107696776,LOC107752632,LOC107552245,LOC108427685 coding downstream 39149 13119195 ~ 13279180 (+)
tprg1 tprg1,LOC107590652,LOC107751286,LOC107684336,LOC107552257,LOC107696755,LOC107752662 coding downstream 234011 13314057 ~ 13333574 (+)
tp63 tp63,LOC107574491,LOC107590651,LOC107659018,LOC107752631,LOC107696778 coding downstream 270475 13350521 ~ 13390651 (+)
LOC122347353 LOC107731845,LOC107659022,LOC107692422 coding downstream 389358 13469404 ~ 13471933 (+)
rpl5b rpl5b,rpl5,LOC107659024,LOC107590646,LOC107732018,LOC107566486,LOC107692344,LOC103368809 coding downstream 456465 13536511 ~ 13542567 (+)
G44622 NA non-coding upstream 366261 12664820 ~ 12699577 (+)
G44611 NA non-coding upstream 394173 12564092 ~ 12671665 (+)
G44606 LOC107593190,LOC107696746,LOC107552261,LOC107753661,LOC107694109,LOC107752664 non-coding upstream 572196 12492953 ~ 12493642 (+)
G44604 NA non-coding upstream 583656 12477124 ~ 12482182 (+)
G44575 hdlbp,LOC107733253,LOC107694132,LOC107552253,LOC107696756,LOC107752661 non-coding upstream 1071701 11993558 ~ 11994137 (+)
G44615 NA non-coding downstream 3334 13083380 ~ 13084230 (+)
G44640 NA non-coding downstream 13810 13093856 ~ 13095910 (+)
LOC122346816 NA non-coding downstream 21233 13101279 ~ 13103566 (+)
G44872 NA non-coding downstream 233507 13313553 ~ 13313854 (+)
G44873 NA non-coding downstream 255143 13335189 ~ 13335542 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 260138 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 538881 12521773 ~ 12526957 (+)
scly scly,LOC107552249,LOC107552250,LOC107752645 other upstream 905939 12154268 ~ 12159899 (+)
G44588 NA other upstream 973383 12087399 ~ 12092455 (+)
LOC122346564 LOC107733248,LOC107694106,LOC107576895 other upstream 1055299 12002147 ~ 12010539 (+)
smx5 lsm2,LSM2,smx5 other downstream 519 13080565 ~ 13082119 (+)
G44645 NA other downstream 28689 13108735 ~ 13109366 (+)
G44887 NA other downstream 314183 13394229 ~ 13409912 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 892127 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 2156119 15236165 ~ 15244280 (+)

Expression


Co-expression Network