faimb (faimb,LOC107709569,LOC107586372,LOC107688905,LOC107677619,LOC107562225)


Basic Information

Item Value
gene id faimb
gene name faimb,LOC107709569,LOC107586372,LOC107688905,LOC107677619,LOC107562225
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 7246256 ~ 7248116 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241867.1
TATTGGCATCGAAAACATCCGCGCTTTTTAACGAGTGAAAAACAGATTTGAGGATTTTTACTCCTAGACCTAATGTCTATTTAAAAGCAATCGCAGTGAAAATAACTGTCTCCTCGGACACTCTCCTCTGCCTTGATGAGTTAAGCCTCTTACGCTAATGCACTCGTTGCTGATCGAGCATAAGATGGCAGACGCAATAATATAGAGATTTAATCAGCAGTCCGGCATAATGTGGACCGCTGCTATGATCAAGCGGAAGCTCAAACATTACATAGAATTAAAAATAGTATAGAGCGGTTGGTGTGGCTCTTAATACAGCATGTCCGGAGACATTGTGGGAGCCTGGGACGTGTCCCTGTGTGATGGGCTTTACCGAATTGAGTTTGAACATGGGACAACGACAGGGAAAAGGGTCATTTACATTAATGGGAAGGAGGTGCTGAGGAGGGACTGGATGTTTAAACTGGTGGGCAAAGAAACGTTCCCTGTTGGGAGCACAGATACAAAAGCGACCATCTCTATCGAGGCAATCACTGGGTTTTCCTATGAGTACACACTGGAAATCAATGGAAAAAATCTCCAGACTTTTTTGGAAAACCGAtcaaaaatgtccaaaacatGGGTGCTGAAACTGGGTGCTGCCGATTACAGGATCGTTCTAGAGAAAGACACCATGGATGTATGGTGCAACGGACGGAAGCTGGAGACGACGGGGGAGTTTACAGAGAATGGAAGCGAGACACACTTCGCCGTGGAGAACCACGAATGCTGCATTAAAGCAACAAGCAGTGGAAGGAAACGAAACGGAATAGTCCATTCCCTGCTGGTGGATGGGATCAGGATAGAAGAGGCCATTGAGTAAAACGGAGGCTAATGGAATTCAGCTGTGCAAGACATTTAGCAACAGTCTAGTTTATCAGAATTAGATACAGATGGCACTgaactagttttttttctccagtggaTCCAGTGTGATGttattttgttcattcatttgttgCATGGATGTTAAAGCAcctcaaaaacatgtttaatgaaTTGCTTGGCTATCGGTGTTTATGATGTTGCATTATGCTGAATATCAAAGTGTCTGTTTGTTAATAAATGGATGCGTTG

Function

symbol description
faimb Predicted to be involved in I-kappaB kinase/NF-kappaB signaling; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors; and positive regulation of neurogenesis. Predicted to act upstream of or within negative regulation of apoptotic process. Is expressed in epiphysis and retinal photoreceptor layer. Orthologous to human FAIM (Fas apoptotic inhibitory molecule).

NR:

description
PREDICTED: fas apoptotic inhibitory molecule 1-like

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241867.1 True 1116 mRNA 0.43 4 7246256 7248116

Neighbor

gene id symbol gene type direction distance location
ackr3b ackr3b,LOC107709570,LOC107586318,LOC107688828,LOC107677631,LOC107748917,LOC107596319 coding downstream 190410 7051184 ~ 7055846 (-)
mlpha mlpha,mlph,LOC107748571,LOC107586370,LOC107688909,LOC107596317,LOC107677617 coding downstream 226341 7010883 ~ 7019915 (-)
lrrfip1b lrrfip1b,LOC107688829,LOC107677622,LOC107596315,LOC107738309,LOC107748528,LOC107586315 coding downstream 235761 6983245 ~ 7010495 (-)
st6gal2b LOC107748529,LOC107688830,LOC107559923,LOC107738307,LOC107596313,LOC107677626 coding downstream 274643 6956132 ~ 6971613 (-)
fhl2b fhl2b,LOC107688912,LOC107559916,LOC107596312,LOC105896541,LOC108437838 coding downstream 372396 6867944 ~ 6873860 (-)
slc19a2 slc19a2,LOC107586324 coding upstream 6748 7254864 ~ 7260771 (-)
psmb3 psmb3,LOC107688824,LOC102792592 coding upstream 21155 7269271 ~ 7272477 (-)
LOC122347322 zgc:162999,LOC107586326,LOC107562228,LOC107688822,LOC108438154,LOC107709582,LOC107677632,LOC107719292 coding upstream 84907 7333023 ~ 7337888 (-)
col18a1b LOC107709584,LOC107586328,LOC107688819 coding upstream 108232 7356348 ~ 7382805 (-)
LOC122346455 tns1a,LOC107688818,LOC107709585,LOC107562221,LOC107663075,LOC107586330,LOC107719294 coding upstream 137603 7385719 ~ 7388299 (-)
G43251 NA non-coding downstream 423235 6815260 ~ 6823021 (-)
G43161 NA non-coding downstream 762863 5995956 ~ 6483393 (-)
G43173 NA non-coding downstream 1222746 6018440 ~ 6023510 (-)
LOC122346634 fmnl2,fmnl2a,LOC108273365,LOC108443439 non-coding downstream 1490792 5747766 ~ 5755464 (-)
LOC122346635 NA non-coding downstream 1498862 5745439 ~ 5747394 (-)
G43472 NA non-coding upstream 181662 7429778 ~ 7430446 (-)
G43478 NA non-coding upstream 213075 7461191 ~ 7498435 (-)
G43516 NA non-coding upstream 550008 7798124 ~ 7799697 (-)
G43528 NA non-coding upstream 608349 7856465 ~ 7857596 (-)
G43513 LOC107688815 non-coding upstream 801281 8049397 ~ 8050678 (-)
agap1 agap1,LOC107688827,LOC107709574,LOC107677621,LOC107748916,LOC107586321,LOC103044997 other downstream 1077 7108162 ~ 7245179 (-)
trim63a trim63a,murf1,LOC107586317,LOC105896535 other downstream 218829 7001115 ~ 7027427 (-)
G43248 pou3f3b,LOC107688836,LOC107559920,LOC107660107,LOC106574614 other downstream 418528 6804058 ~ 6827728 (-)
cacnb4b cacnb4b,LOC107566792,LOC107688838,LOC107748538,LOC107705621,LOC107660102,LOC107596307 other downstream 721306 6041876 ~ 6524950 (-)
G43180 nck2b,LOC107688832,LOC107748532,LOC107660111,LOC107738306 other downstream 945119 6273323 ~ 6301137 (-)
LOC122346787 unc80,LOC107733373,LOC107677624,LOC107688825 other upstream 26724 7274840 ~ 7314774 (-)
nomo nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882,LOC107586361 other upstream 68831 7316947 ~ 7329565 (-)
G43463 nomo,LOC107677623,LOC107562229,LOC107709581,LOC107733372,LOC107688882 other upstream 331779 7579895 ~ 7586367 (-)
LOC122346476 cidec,LOC107731779,LOC107688813,LOC107694911,LOC107710160 other upstream 488974 7737090 ~ 7770451 (-)
G43514 spega,LOC107731772,LOC107688815,LOC107586363,LOC107719300 other upstream 798986 8047102 ~ 8048008 (-)

Expression


Co-expression Network