si:dkey-66a8.7 (LOC107673611,LOC107711100,LOC107685304,LOC107582732,LOC107585166)


Basic Information

Item Value
gene id si:dkey-66a8.7
gene name LOC107673611,LOC107711100,LOC107685304,LOC107582732,LOC107585166
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18088060 ~ 18090531 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241951.1
GCTGTAAGCTCTGAAGCAGCAGGGAACAAGGAAATGACGAGATGACACGTCAATAAACATTCATGTGCAAGAATGTCAGTAActtctaaaacctttttacttTCGTTAAAGATGATTACTAACCCGCGGAGGTTGTGAGGTCACCTTAACAAAGAGTTGGGCTCAGCCGTTTTATCGATGGTGCCTTATCTGTTGTTTCGCTCAAACGCGGACTGTTTCAGTCGATCAACTCGTTTTGTTTTCAAGCGAAGCATTTGAGATTCTTTTGTAAAGAGCTACTGCTTTTGTATGATCCGGTGAACTGATGGACCTCGTTATAAAGGATGAAATGAATCAGGAGGACTGGATGTCACGTTTGCCAGAGAAACTCTGGGATGTCCCTTTAACATGTCTCTCAATACCAGGTAGCCACGATGCAATGAGCTACTGTCTGGATATCACTTCTCCACTGCTCCGATCTGAGTCAGACACATTTAGGTTTCTGGATGGAGTTTTCTGCTGTTTCACCAGGCCAGCTATTCGCAAATGGGCTACTACTCAGGTGCAAAACATTGTGGAGCAACTTACAGCAGGCATTCGATACTTTGATCTTCGAATTGCCCACAAACAGTGTGATTCTTCCAAAGAGCTTTACTTCACTCACGTCATTTACACGCATGCAATGGTCATTGAAACTCTACAGACTGTTGCTTCATGGCTTGAATCTCATCCCAAAGAAATCATCATTCTAGCTTGTAGTCATTTTGAAGGGCTGgattataaaatgcatgaagAATTTATCTATTCTCTGAAGAAAATCTTTGGCTCTAAACTGTGCCCTCGCGACGAGGCCTTATTGACCTTGCGGAGTCTGTGGTCTTCAGGCTATCAGGTTGTGCTGTCATATGAAGACCAGTCAGCATCCCGTTATAAGGAGTTGTGGCCTTGTATCCCATACCTTTGGGCCAATAAACCTAATGCAGAAGAGTTGATCTACTATCTCGAATGCCAGAAACGGCTTGGTCGACCTGAAGGTTTTTTTGTAGCTGGCCTGAACCTAACGACAGATCGATGTTTCATTGCCTCACATCCTCGGGTGTCTCTCCGAACTTTGACCATGGAGAACTGGAACCATGTGAAGATATGGTTAGAAGACCAGAAACCAGGAGCTGAACCCACATGTCTAAACATAATAGCAGGCGACTTCATTGGTCCTGTACCATTTTGTTCCCTTGTTATTGGTCTTAACAAAAAACTGCTTTAAGGGTGGGTTGATATGAAGCCTTTATGGCATGTGAAGGCCTTTTTTAAGGAATCATTTGGGATACAAACCCAAGGTTTACAAGTGATCTAAAAAGTATTCAG

Function

NR:

description
PI-PLC X domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241951.1 True 1344 mRNA 0.43 6 18088060 18090531

Neighbor

gene id symbol gene type direction distance location
nit2 nit2,LOC107673472,LOC107585165,LOC107582734,LOC107685305 coding downstream 4387 18079634 ~ 18083673 (-)
LOC122346728 cth,LOC107585162,LOC107673554,LOC107673555,LOC107585163,LOC107582733 coding downstream 27175 18045653 ~ 18060885 (-)
LOC122346729 cth,LOC107585162,LOC107673554,LOC107673555,LOC107585163,LOC107582733 coding downstream 47707 18028054 ~ 18040353 (-)
LOC122346727 cth,LOC107582733,LOC107685307,LOC107673555,LOC107585163,LOC107585162 coding downstream 64018 18015238 ~ 18024042 (-)
LOC122347583 LOC107711009 coding downstream 91321 17993970 ~ 17996739 (-)
plcxd1 plcxd1,LOC107673474,LOC107711026,LOC107585164,LOC107685302,LOC107753403,LOC103035541 coding upstream 584 18091115 ~ 18096535 (-)
jade3 LOC107711098,LOC107685301,LOC107582729,LOC107753402,LOC107673568 coding upstream 9333 18099864 ~ 18109115 (-)
rp2 rp2,LOC107753404,LOC107711097,LOC107685300,LOC107673570 coding upstream 20115 18110646 ~ 18116377 (-)
chst7 chst7,LOC107711096,LOC107673531,LOC107585159,LOC107685297,LOC107753406 coding upstream 64018 18154549 ~ 18155965 (-)
LOC122346611 fndc9,LOC107673533,LOC107585156,LOC107711090,LOC107716964,LOC107580334,LOC107685295 coding upstream 96897 18187428 ~ 18191523 (-)
LOC122346732 nit2 non-coding downstream 21111 18062781 ~ 18066949 (-)
LOC122346731 nit2,LOC107585165,LOC107673472,LOC107582734,LOC107685305 non-coding downstream 43430 18040364 ~ 18044630 (-)
G46000 NA non-coding downstream 265325 17822536 ~ 17822735 (-)
G45993 NA non-coding downstream 279945 17807621 ~ 17808115 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding downstream 569455 17514638 ~ 17518605 (-)
G46074 NA non-coding upstream 6537 18097068 ~ 18097490 (-)
G46092 NA non-coding upstream 26825 18117356 ~ 18117582 (-)
G46140 NA non-coding upstream 159403 18249934 ~ 18250635 (-)
G46160 NA non-coding upstream 242312 18332843 ~ 18333266 (-)
G46172 NA non-coding upstream 269148 18359679 ~ 18359981 (-)
opa1 opa1,LOC107585173,LOC107711112,LOC107582739,LOC107673572,LOC107722677 other downstream 313953 17743715 ~ 17774107 (-)
brinp3a.2 brinp3a.2,LOC107711116,LOC107585215,LOC107732449,LOC107667973,LOC107685312 other downstream 673921 17382327 ~ 17414139 (-)
G45910 NA other downstream 779582 17307815 ~ 17308478 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other downstream 841674 17235790 ~ 17246386 (-)
G45895 NA other downstream 900742 17186689 ~ 17187318 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other upstream 553775 18644306 ~ 18645134 (-)
LOC122347235 NA other upstream 616092 18706623 ~ 18707596 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other upstream 623643 18714174 ~ 18717488 (-)
G46478 NA other upstream 964615 19055146 ~ 19056131 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other upstream 1024530 19115061 ~ 19149731 (-)

Expression


Co-expression Network