zgc:174863


Basic Information

Item Value
gene id zgc:174863
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10377331 ~ 10384083 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242153.1
AAACCATATTTGATTTCGCTTATAGGAGTGGCTAATACAGAAAGTGAAAGTAGCAGCTTACACAAAGCCTGTCCTTCATGGTTCGCTCGGTTGTATTCCTCTCTCCTTGTTCATTTGAAGAGCATTTAGACAAGTAATCATGTCTTCAATGAAGGTTGTGCTTGTAGtatctctcttcctccctgcCGTGAACCCCATGTCAGATTTGTGGAATTTGGAATGCCACCCTAAGCCTGGAATATTTGGTCAGACCACATCTATAAAATGCGTTTTCAAAGACATCgaacatattcaaataattggagtttatttaagaaaaactgaTCAGATTAAGCGGGTTTTTACTCAAACAAAGTCAGATTTCTCAGGAGATCAACGCTTTAGCCTTGAAAACATGGCAATGGGTCCATCTCTGCAAATATCTAACACACAGTTTTCAGATGAGGGCAAATATATGTACTGTGTTGAAACGGACTCTGGTCGTAAAGAAATTGAATTTAGCATCAGTGTCACAGCAAAGTACAAGGATCCCGTCACAAGCACATGGCCTGAGCATATAACAAATGGAGAAGCGGCCAGCCTTTACTGCAATGCTACTGACGGATACCCCGGAGGTTTTATCCAATGGTTTGACCATTCTGGATCCAACTGGACCATGAATTCGCATCTGACAAAGACCCCCACAGACATCAACGGTGTAAAATCTGTGGCTTTGTCTAGCAAACTGACTTTCAAGTCTATCAATTTGGACCTAGCACCATATAGATGCATCGTCTTTAACGGCAAATTTGAACAAGATGCAGAAAACACACTGGACTTCTCAGCTGCTATAAGTAATACTAATGAAGAATCTTCCAGATCTAACACAACAAAAATTGTTGCCGGCGTGATGGTCATTGGATCGCTTATCGCTGGCCTGCTGTGTGCTCTGTTGTgtttcagaaacaaaaaatatcGTTATAACGCAACTTATGCAGACGATCCAGAGAACGTGACAGCAGAAGTTCACACTGAGGACAAACAGCAGCCGTTTGACTGAAATGAAAGTGAAGTCATAATGAAAATGGCAGCTGTTTCAGTAATGACAGACTTATTCAGTCGGCTTCTCTGTACATTTACAATCAAATGTAGGTTTAGACATCGTGCACACTAATAACTGTCAAATTTATTACTATATCAATGTGTAAACAAGGTTCTTGGAGATTTGATGAAAGTTATAGGAATGTtggtaaagtgtttttttggtttgttttcatcAAGTTCGGGGGTTAATGTAAAATTGGTTAAATATGTCAGTGACTTTATAACTGTACCAGCTTATACTAACAATAACAAgcaatattattactgtttgctttttgttctgctttcttgaacattatttatgatttaacaaATGTAGCAAATATAATATACGAACCAAAATCCGAAACAGTTTTGTATCCGTCTAGAAAATCTTTCATCACTAATCATTTTGTCTTTACTCACTGAGAggtttttgataatattttgcaaatcatcttattaagtaaatattatacaaatatatcttaattaaatatagattctgaactataaataaataaatagcaaataattgaataaatattttgcatgaaattgTATGTAAATGTGTCGTACTACTGTCATTGTATCActtgtcaaatatttttaaggatgtgtgtgtttgttctttctttgaaatgaaagactgcatttttatcatttgttttactgtaataaaaacatgatgcaATGTTGTATCTTCCACTGGAAAA

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
ko05133 Pertussis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242153.1 True 1778 mRNA 0.36 7 10377331 10384083

Neighbor

gene id symbol gene type direction distance location
sept9b sept9b,LOC107754867,LOC107566422,LOC107561033,LOC107718712,LOC107674495 coding downstream 42290 10296004 ~ 10335041 (-)
rhbdl3 rhbdl3,LOC107718708,LOC107701837,LOC107698683,LOC107591910,LOC107754871 coding downstream 174575 10167236 ~ 10202756 (-)
znf207b znf207b,LOC107669543,LOC107710013,LOC107553300 coding downstream 225267 10146224 ~ 10152064 (-)
tefm tefm,LOC107591914 coding downstream 250590 10123815 ~ 10126741 (-)
utp6 utp6,LOC107710019 coding downstream 270523 10101483 ~ 10106808 (-)
jpt1a LOC107728178,LOC107659861,LOC107733897,LOC107561029,LOC107573532 coding upstream 5964 10390047 ~ 10394216 (-)
sumo2a LOC107573531,LOC107733894,LOC107704011,LOC106574529 coding upstream 11090 10395173 ~ 10398631 (-)
gga3a gga3,LOC107704010,LOC107573533,LOC107733910,LOC107659859 coding upstream 15262 10399345 ~ 10406457 (-)
mif4gda mif4gda,LOC107728181,LOC107561027,LOC107659858 coding upstream 24825 10408908 ~ 10411264 (-)
grb2a grb2a,grb2,LOC107733915,LOC107728184,LOC107704009,LOC105012273,LOC107659857,LOC108441871 coding upstream 27618 10411701 ~ 10427410 (-)
G44210 NA non-coding downstream 753 10376140 ~ 10376578 (-)
G44209 NA non-coding downstream 3763 10373170 ~ 10373568 (-)
G44208 NA non-coding downstream 4479 10372640 ~ 10372852 (-)
G44168 NA non-coding downstream 134822 10242210 ~ 10242509 (-)
G44167 NA non-coding downstream 138713 10238419 ~ 10238618 (-)
G44213 NA non-coding upstream 3961 10388044 ~ 10388442 (-)
G44338 NA non-coding upstream 197326 10581409 ~ 10582029 (-)
G44339 NA non-coding upstream 197950 10582033 ~ 10582284 (-)
G44341 NA non-coding upstream 262050 10646133 ~ 10653370 (-)
G44350 NA non-coding upstream 302977 10687060 ~ 10895352 (-)
LOC122347367 NA other downstream 18481 10355877 ~ 10358850 (-)
tnrc6c2 LOC107701838,LOC107566423,LOC107754870,LOC107591908,LOC107718711,LOC107698681 other downstream 133906 10204617 ~ 10243425 (-)
cd7al LOC107710016,LOC107553302,LOC107669545,LOC107698686,LOC107710292,LOC107591915,LOC107553301,LOC107710015 other downstream 232163 10138905 ~ 10145168 (-)
c6h17orf67 cunh17orf67,LOC107591943,LOC107669532,LOC107701203,LOC103044666 other downstream 349651 10025453 ~ 10027680 (-)
anapc11 anapc11,LOC107553313 other downstream 428343 9945667 ~ 9948988 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other upstream 50121 10434204 ~ 10509003 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other upstream 194906 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other upstream 325962 10710045 ~ 10716741 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other upstream 564609 10948692 ~ 10985132 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other upstream 670952 11055035 ~ 11069466 (-)

Expression


Co-expression Network