myl6 (myl6,zgc:153867,LOC107585121,LOC105013534,LOC108440770,LOC108271738)


Basic Information

Item Value
gene id myl6
gene name myl6,zgc:153867,LOC107585121,LOC105013534,LOC108440770,LOC108271738
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19547029 ~ 19551857 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242163.1
CAGCGCCCGCACAATTCGATTGGCCGATTCGGCTTGAATAGAGTTGACATGACGTCATCGTGAATCTAGCGGTGTAGCGGAGAGTGTTCGCCCATACTGTACTTCACGCAGCGCTCGCGCCGAAGCCCCATCCTCAAACACTGCAGTCATGTCTGACTTCACTGAGGATCAGATTTGTGAGTTTAAGGAGGCCTTCCTTCTGTTTGACCGAACGGGAGATGGGAAGATCATGTACAATCAGTGTGGGGATGTGATGCGTGCTCTGGGGCAAAACCCTGTCAATGCTGAGGTCCTCAAAGTCCTGGGCAACCCCAGTAATGAAGATATGAACATGAAAATGCTGGACTTCGAGCAGTTTCTGCCCATGCTGCAGGCCATCGCTAAGAACAAGGATCAGGGATCCTTTGAGGACTTCGTGGAGGGGCTGCGGGTGTTTGACAAAGAGGGAAATGGAACAGTGATGGGCGCTGAGCTTCGACATGTCCTCACTACACTGGGTGAGAAGATGACAGAGGAAGAAGTGGAGACACTTTTGGCGGGACATGAGGACGCTAATGGCTGCATCAATTATGAAGAACTCGTAAGGATGGTCATGAGCGGTTGAAGAATTCAAACacgtttcttttatttttgtccgTCAGGCCCCCTCATTTATGTGATTCTTCATTTCCATAttagctttttacattttttttttccttaagtGCCTTTTATCATGTTTCTGGAGAATTATGGCTCAATTCATTCCAAAAACTTCCACTGGTGTTCATAGGTTTGCTTGAATACCTTTCAGCCATTGCATTCATTCCATCAGTTATTGTATTCGGCCCCTATTCGTCCTAAACTGTGAGGGGCATTTTGATTGGCTCtcactgtagttttttttttatttattttttttattaaccattGACTAAATGTTTGTTAGTCATTTGACATCACTCTTTATTGTCTGCTGAgcatcataataaatattcagaatGATCTTTTGA
>XM_043242164.1
CCAGCGCCCGCACAATTCGATTGGCCGATTCGGCTTGAATAGAGTTGACATGACGTCATCGTGAATCTAGCGGTGTAGCGGAGAGTGTTCGCCCATACTGTACTTCACGCAGCGCTCGCGCCGAAGCCCCATCCTCAAACACTGCAGTCATGTCTGACTTCACTGAGGATCAGATTTGTGAGTTTAAGGAGGCCTTCCTTCTGTTTGACCGAACGGGAGATGGGAAGATCATGTACAATCAGTGTGGGGATGTGATGCGTGCTCTGGGGCAAAACCCTGTCAATGCTGAGGTCCTCAAAGTCCTGGGCAACCCCAGTAATGAAGATATGAACATGAAAATGCTGGACTTCGAGCAGTTTCTGCCCATGCTGCAGGCCATCGCTAAGAACAAGGATCAGGGATCCTTTGAGGACTTCGTGGAGGGGCTGCGGGTGTTTGACAAAGAGGGAAATGGAACAGTGATGGGCGCTGAGCTTCGACATGTCCTCACTACACTGGGTGAGAAGATGACAGAGGAAGAAGTGGAGACACTTTTGGCGGGACATGAGGACGCTAATGGCTGCATCAATTATGAAGCATTTGTTCGCCACATTATGGCTGGTTGAGGAGAGGAACTCGTAAGGATGGTCATGAGCGGTTGAAGAATTCAAACacgtttcttttatttttgtccgTCAGGCCCCCTCATTTATGTGATTCTTCATTTCCATAttagctttttacattttttttttccttaagtGCCTTTTATCATGTTTCTGGAGAATTATGGCTCAATTCATTCCAAAAACTTCCACTGGTGTTCATAGGTTTGCTTGAATACCTTTCAGCCATTGCATTCATTCCATCAGTTATTGTATTCGGCCCCTATTCGTCCTAAACTGTGAGGGGCATTTTGATTGGCTCtcactgtagttttttttttatttattttttttattaaccattGACTAAATGTTTGTTAGTCATTTGACATCACTCTTTATTGTCTGCTGAgcatcataataaatattcagaatGATCTTTTGA

Function

symbol description
zgc:153867 Predicted to enable calcium ion binding activity. Orthologous to human MYL6 (myosin light chain 6) and MYL6B (myosin light chain 6B).
myl6 Predicted to enable calcium ion binding activity. Orthologous to several human genes including MYL6 (myosin light chain 6).

NR:

description
myosin light polypeptide 6-like isoform X2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12751 MYL6; myosin light chain 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242163.1 False 992 mRNA 0.44 6 19547029 19551856
XM_043242164.1 True 1029 mRNA 0.45 7 19547029 19551857

Neighbor

gene id symbol gene type direction distance location
pfkmb pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407 coding downstream 45944 19486992 ~ 19501085 (-)
itgb7 itgb7,LOC107711053,LOC107673468,LOC107667391,LOC107582697,LOC107740576 coding downstream 60182 19477718 ~ 19486847 (-)
espl1 espl1,LOC107711058,LOC107673592,LOC107740575,LOC107667390 coding downstream 69473 19465314 ~ 19477556 (-)
pfdn5 pfdn5,LOC107667318,LOC107711057,LOC107740577,LOC107673463 coding downstream 82483 19462391 ~ 19464546 (-)
larp4ab LOC107585124,LOC107711054,LOC107673512,LOC107667382,LOC107740568 coding downstream 85770 19448028 ~ 19461259 (-)
sumf1 sumf1,LOC107673603,LOC107585117 coding upstream 8705 19560562 ~ 19568042 (-)
si:dkey-197j19.5 efcab12 coding upstream 57943 19609800 ~ 19612454 (-)
uroc1 uroc1 coding upstream 61247 19613104 ~ 19619818 (-)
chchd4b LOC107711045,LOC107673517,LOC107580698 coding upstream 68300 19620157 ~ 19621083 (-)
sec61a1 sec61a1,LOC103023094,LOC108440718,LOC103358725,LOC108436273,LOC102228108,LOC107673516,LOC107384934,LOC106518493 coding upstream 70698 19622555 ~ 19627477 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding downstream 149299 19393477 ~ 19397730 (-)
G46509 NA non-coding downstream 304218 19212639 ~ 19242811 (-)
LOC122347223 NA non-coding downstream 395335 19149746 ~ 19151694 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding downstream 498193 19044628 ~ 19048836 (-)
G46476 NA non-coding downstream 503160 19043616 ~ 19043869 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding upstream 54505 19606362 ~ 19607056 (-)
G46658 NA non-coding upstream 239785 19791642 ~ 19792328 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding upstream 249386 19801243 ~ 19802266 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding upstream 282213 19834070 ~ 19838047 (-)
LOC122347207 NA non-coding upstream 325455 19877312 ~ 19880588 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 397298 19115061 ~ 19149731 (-)
G46478 NA other downstream 490898 19055146 ~ 19056131 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 829541 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 839433 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 901895 18644306 ~ 18645134 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 1460 19553317 ~ 19555942 (-)
tomm6 NA other upstream 289622 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 291187 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 347815 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 446775 19998632 ~ 20000638 (-)

Expression


Co-expression Network