pfkmb (pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407)



Basic Information


Item Value
gene id pfkmb
gene name pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19486992 ~ 19501085 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043242212.1
AAACTGTTGTCACGGTCCCACTCCACTTTCTCAATCAGTCTTGAAGAGAGTGGTCTGATAGAGAAAGGTGACAGTTGACTTCAGAATTTCTCTTGTTGTTCCCAGGTCATCTCTTCAATATGCAGCGTTCAACATCTGTGGACCCCACAAAGATGGGTGTTGGAAGAGCCATCGCTGTCCTCACCTCCGGAGGAGATGCACAAGGTATGAATGCTGCTGTCAGAGCCACAGTGAGAGTCGGGATCTACACTGGTGCGAAAGTCTATTTTGTACATGAGGGTTATCAGGGCCTAGTCGATGGAGGAGATAACATCCGACAAGCAACTTGGGAGAGTGTGTCAATGATGCTGCAGCTGGGTGGCACAGTGATTGGCAGTGCCCGCTGCCAGGACTTCCGCTCTAAGGAAGGCAGAGCTAAAGCCGCATGTAACCTGGTGAAGCTGGGAATCACTAATCTATGTGTTATTGGTGGAGATGGAAGCCTGACAGGCGCCAATGAGTTTCGAAATGAGTGGAGTGAACTGCTCCAAATCTCGCTAAAAGCAGGTAAAATCACAGCAGAGGAGGCTAAACGCTCATCTCATCTGAACATTGTTGGGATGGTGGGATCCATCGACAATGATTTCTGTGGCACAGACATGACCATTGGCACTGATTCGGCTCTGCACAGGATCATGGAAGTAGTGGATGCCATCACAACAACAGCTCAGAgTCATCAAAGAGCCTTCATCCTTGAAGTGATGGGGAGGCATTGTGGaTATTTGGCCTTAGTCACTGCGCTGGCGTGTGGTGCTGACTGGGTTTTTATTCCTGAAATGCCCCCAGATGAAGGGTGGGAGGACCATCTGTGCAGGAGACTTACCTATCAAAGAAGCATTGGCAATCGTTTAAATGTCATCATTGTGGCAGAAGGTGCTTTGGATCGCCACGGCAAACCTATCACTTGTGATATTATCAAGAGCctGGTTACTAAGAAGCTCGGATTTGACACACGTGCCACTATTCTGGGTCATGTGCAGAGAGGAGGAACACCTTCAGCCTTTGACAGAATCTTGGGCAGTAGGATGGGGGTGGAGGCGGTGATGGCATTGCTGGAGGCTACTCCTGACACCCCTGCGTGTGTGGTCAGTCTATCTGGAAACATGGCGGTTCGACTGCCTCTCATGGAGTGCGTGCAAGTGACAAAAGAAGTGACTAAAGCAATGGCAGAGGGCAGGTTTGAGGAAGCCATCAAGCTCAGGGGAAAGAGTTTTGAGAACAACTGGAACACATATAAACTCTTGGCTCATGTGACCGCCCCTGATGTGAAGAGTAATATAAACATAGCTATCCTGAACGTGGGCGCTCCATGTGCAGGAATGAACGCAGCGGTCCGTTCCGCCGTCAGGATCGGTATCCTTCAAGGACACAACATGCTAGCAGTGCATGATGGCTTCGATGGACTTGCACACGGAACTATTGAACCAATGGCATGGGGCTACGTTGGAGGCTGGACAGGCAAAGGTGGTTCTAATTTAGGAACCAAGCGGTCACTGCCTGCTAGCATGATCGAAGAGATCAGTCTGAACATCGCCAAGTTTAACATTCATGCCCTGGTTATCATTGGAGGGTTTGAGGCCTTTGTTGGAGGTTTGGAATTAGTGACTGCCAGAGAAAAATACGAGGAGCTGTGTATTCCCCTGGTTGTTATTCCAGCTACTGTGTCTAATAACGTTCCTGGATCAGATTTCAGCATCGGTGCTGATACCGCTCTCAATACTATCACAACTACGTGCGACAGAATCAAGCAATCCGCTGCTGGAACTAAGCGTAGGGTTTTCATCATTGAAACAATGGGGGGATTCTGTGGATATCTGGCAACCATGGCGGGACTGGCTGCCGGGGCTGATGCTGCTTATATCTATGAAGATCCATTTGGCATTCACGACCTGGAGACAAACGTGGAGCACTTACTGGAGAAGATGAAGACCACAGTGAAAAGAGGCCTCATCCTTAGGAATGAGAAATGTAATGCAAACTATACTACCGATTTTCTCTTCAACTTGTACTCGGAAGAGGGCAAGGGAGTTTTTGATTGCCGCAAGAACGTGCTTGGACACATGCAGCAGGGTGGAACCCCAACACCTTTTGATAGGAACTTTGGTACAAAGATGGGCGCTAAAGCAGTGTTATGGCTGACTGATAAACTGAAGGAATGTTACAGACATGGCCGTATCTTTGCTAACACACCGGACTCTGCCTGTGTTTTGGGAATGAAAAAGAGAGCCATGATCTTTCAGCCTCTCTCTGATCTCAAAGAGGACACTGACTTTGAACATCGTATACCGAAGGCTCAGTGGTGGCTGAAACTTAGGCCTATTCTCAAGATTCTGGCCAAATACAAGATCAGTTTGGACACCTCAGAGACGGCTACAATGGAGCATGTTATCAAGAAGAGAGGAGCGGTCTAgaccacacacgcacacacacatatacagaatTACAATGggataaaatgtttataagcCATATTTTCTTAGTTTACAATAACATTCAGTTAATCACCCTCATGTTCTTCATAGACcatacaaacacaaaaggaaatataggtaaacaaataatgacatttttggatgtttaaatttttggatgaactatgcctttaagtaCAACGCCCCACTAAAGGAGTTTTCAGTATCAGTTGGATTTGTACTATTTCATTACTGGATTTCTCATTTTGGATCATGTCTGGACTAAATTGTGCtgttgtttgaaaataaataaaatgggctaaaatgcaa
>XM_043242213.1
ATGGAGGCAGTGTtggacagctgtgtgtgtgtctggcaggtgtgtgtatgtgtctgggatgtgtttgtatgtgtgtgtcaaattagtttttgttttttacagttgtGCGAGTGCATTCTGCAACTATCTTTACTCCTGTTCCACTGGATTCCTCATATTTGGCTGGCGGTGTTCACCTGGCAGTTCGCGCACAGGAAGATTCAGTTTGATGCTAATCATGTATACGGATCCAAACCATCAAGTAGCAGTGATAAATCAAGGTCTGAAGTATGTGCTGATGGAAAGCCCACTTCTACAAAGTATTTAGACGGAAGCCTGAAGAACCTCAGCTGTCCCACCACCATACACAATGGCTGTCATCTCTTCAATATGCAGCGTTCAACATCTGTGGACCCCACAAAGATGGGTGTTGGAAGAGCCATCGCTGTCCTCACCTCCGGAGGAGATGCACAAGGTATGAATGCTGCTGTCAGAGCCACAGTGAGAGTCGGGATCTACACTGGTGCGAAAGTCTATTTTGTACATGAGGGTTATCAGGGCCTAGTCGATGGAGGAGATAACATCCGACAAGCAACTTGGGAGAGTGTGTCAATGATGCTGCAGCTGGGTGGCACAGTGATTGGCAGTGCCCGCTGCCAGGACTTCCGCTCTAAGGAAGGCAGAGCTAAAGCCGCATGTAACCTGGTGAAGCTGGGAATCACTAATCTATGTGTTATTGGTGGAGATGGAAGCCTGACAGGCGCCAATGAGTTTCGAAATGAGTGGAGTGAACTGCTCCAAATCTCGCTAAAAGCAGGTAAAATCACAGCAGAGGAGGCTAAACGCTCATCTCATCTGAACATTGTTGGGATGGTGGGATCCATCGACAATGATTTCTGTGGCACAGACATGACCATTGGCACTGATTCGGCTCTGCACAGGATCATGGAAGTAGTGGATGCCATCACAACAACAGCTCAGAgTCATCAAAGAGCCTTCATCCTTGAAGTGATGGGGAGGCATTGTGGaTATTTGGCCTTAGTCACTGCGCTGGCGTGTGGTGCTGACTGGGTTTTTATTCCTGAAATGCCCCCAGATGAAGGGTGGGAGGACCATCTGTGCAGGAGACTTACCTATCAAAGAAGCATTGGCAATCGTTTAAATGTCATCATTGTGGCAGAAGGTGCTTTGGATCGCCACGGCAAACCTATCACTTGTGATATTATCAAGAGCctGGTTACTAAGAAGCTCGGATTTGACACACGTGCCACTATTCTGGGTCATGTGCAGAGAGGAGGAACACCTTCAGCCTTTGACAGAATCTTGGGCAGTAGGATGGGGGTGGAGGCGGTGATGGCATTGCTGGAGGCTACTCCTGACACCCCTGCGTGTGTGGTCAGTCTATCTGGAAACATGGCGGTTCGACTGCCTCTCATGGAGTGCGTGCAAGTGACAAAAGAAGTGACTAAAGCAATGGCAGAGGGCAGGTTTGAGGAAGCCATCAAGCTCAGGGGAAAGAGTTTTGAGAACAACTGGAACACATATAAACTCTTGGCTCATGTGACCGCCCCTGATGTGAAGAGTAATATAAACATAGCTATCCTGAACGTGGGCGCTCCATGTGCAGGAATGAACGCAGCGGTCCGTTCCGCCGTCAGGATCGGTATCCTTCAAGGACACAACATGCTAGCAGTGCATGATGGCTTCGATGGACTTGCACACGGAACTATTGAACCAATGGCATGGGGCTACGTTGGAGGCTGGACAGGCAAAGGTGGTTCTAATTTAGGAACCAAGCGGTCACTGCCTGCTAGCATGATCGAAGAGATCAGTCTGAACATCGCCAAGTTTAACATTCATGCCCTGGTTATCATTGGAGGGTTTGAGGCCTTTGTTGGAGGTTTGGAATTAGTGACTGCCAGAGAAAAATACGAGGAGCTGTGTATTCCCCTGGTTGTTATTCCAGCTACTGTGTCTAATAACGTTCCTGGATCAGATTTCAGCATCGGTGCTGATACCGCTCTCAATACTATCACAACTACGTGCGACAGAATCAAGCAATCCGCTGCTGGAACTAAGCGTAGGGTTTTCATCATTGAAACAATGGGGGGATTCTGTGGATATCTGGCAACCATGGCGGGACTGGCTGCCGGGGCTGATGCTGCTTATATCTATGAAGATCCATTTGGCATTCACGACCTGGAGACAAACGTGGAGCACTTACTGGAGAAGATGAAGACCACAGTGAAAAGAGGCCTCATCCTTAGGAATGAGAAATGTAATGCAAACTATACTACCGATTTTCTCTTCAACTTGTACTCGGAAGAGGGCAAGGGAGTTTTTGATTGCCGCAAGAACGTGCTTGGACACATGCAGCAGGGTGGAACCCCAACACCTTTTGATAGGAACTTTGGTACAAAGATGGGCGCTAAAGCAGTGTTATGGCTGACTGATAAACTGAAGGAATGTTACAGACATGGCCGTATCTTTGCTAACACACCGGACTCTGCCTGTGTTTTGGGAATGAAAAAGAGAGCCATGATCTTTCAGCCTCTCTCTGATCTCAAAGAGGACACTGACTTTGAACATCGTATACCGAAGGCTCAGTGGTGGCTGAAACTTAGGCCTATTCTCAAGATTCTGGCCAAATACAAGATCAGTTTGGACACCTCAGAGACGGCTACAATGGAGCATGTTATCAAGAAGAGAGGAGCGGTCTAgaccacacacgcacacacacatatacagaatTACAATGggataaaatgtttataagcCATATTTTCTTAGTTTACAATAACATTCAGTTAATCACCCTCATGTTCTTCATAGACcatacaaacacaaaaggaaatataggtaaacaaataatgacatttttggatgtttaaatttttggatgaactatgcctttaagtaCAACGCCCCACTAAAGGAGTTTTCAGTATCAGTTGGATTTGTACTATTTCATTACTGGATTTCTCATTTTGGATCATGTCTGGACTAAATTGTGCtgttgtttgaaaataaataaaatgggctaaaatgcaa

Function


symbol description
pfkmb Predicted to enable several functions, including 6-phosphofructokinase activity; anion binding activity; and identical protein binding activity. Predicted to be involved in canonical glycolysis; fructose 1,6-bisphosphate metabolic process; and fructose 6-phosphate metabolic process. Predicted to act upstream of or within glycolytic process. Predicted to be located in cytoplasm. Predicted to be part of 6-phosphofructokinase complex. Predicted to be active in membrane. Human ortholog(s) of this gene implicated in glycogen storage disease VII. Orthologous to human PFKM (phosphofructokinase, muscle).

NR:

description
ATP-dependent 6-phosphofructokinase, muscle type-like

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0016310 phosphorylation biological_process
GO:0006002 fructose 6-phosphate metabolic process biological_process
GO:0005945 6-phosphofructokinase complex cellular_component
GO:0003872 6-phosphofructokinase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG:

id description
K00850 pfkA, PFK; 6-phosphofructokinase 1

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043242212.1 False 2780 mRNA 0.47 22 19486992 19498261
XM_043242213.1 True 3030 mRNA 0.46 25 19486992 19501085
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Neighbor


gene id symbol gene type direction distance location
itgb7 itgb7,LOC107711053,LOC107673468,LOC107667391,LOC107582697,LOC107740576 coding downstream 145 19477718 ~ 19486847 (-)
espl1 espl1,LOC107711058,LOC107673592,LOC107740575,LOC107667390 coding downstream 9436 19465314 ~ 19477556 (-)
pfdn5 pfdn5,LOC107667318,LOC107711057,LOC107740577,LOC107673463 coding downstream 22446 19462391 ~ 19464546 (-)
larp4ab LOC107585124,LOC107711054,LOC107673512,LOC107667382,LOC107740568 coding downstream 25733 19448028 ~ 19461259 (-)
atf7b atf7b,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698 coding downstream 42381 19435181 ~ 19444611 (-)
myl6 myl6,zgc:153867,LOC107585121,LOC105013534,LOC108440770,LOC108271738 coding upstream 45944 19547029 ~ 19551857 (-)
sumf1 sumf1,LOC107673603,LOC107585117 coding upstream 59477 19560562 ~ 19568042 (-)
si:dkey-197j19.5 efcab12 coding upstream 108715 19609800 ~ 19612454 (-)
uroc1 uroc1 coding upstream 112019 19613104 ~ 19619818 (-)
chchd4b LOC107711045,LOC107673517,LOC107580698 coding upstream 119072 19620157 ~ 19621083 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding downstream 89262 19393477 ~ 19397730 (-)
G46509 NA non-coding downstream 244181 19212639 ~ 19242811 (-)
LOC122347223 NA non-coding downstream 335298 19149746 ~ 19151694 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding downstream 438156 19044628 ~ 19048836 (-)
G46476 NA non-coding downstream 443123 19043616 ~ 19043869 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding upstream 105277 19606362 ~ 19607056 (-)
G46658 NA non-coding upstream 290557 19791642 ~ 19792328 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding upstream 300158 19801243 ~ 19802266 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding upstream 332985 19834070 ~ 19838047 (-)
LOC122347207 NA non-coding upstream 376227 19877312 ~ 19880588 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 337261 19115061 ~ 19149731 (-)
G46478 NA other downstream 430861 19055146 ~ 19056131 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 769504 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 779396 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 841858 18644306 ~ 18645134 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 52232 19553317 ~ 19555942 (-)
tomm6 NA other upstream 340394 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 341959 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 398587 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 497547 19998632 ~ 20000638 (-)

Expression


pfkmb(pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407) Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 100.
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pfkmb(pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407) Expression in each Bioproject

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pfkmb(pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
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Co-expression Network