Item | Value |
---|---|
gene id | pfkmb |
gene name | pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407 |
gene type | coding |
species | tiger barb (Puntius tetrazona) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_056704.1 |
NCBI id | CM032073.1 |
chromosome length | 27473687 |
location | 19486992 ~ 19501085 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
symbol | description |
---|---|
pfkmb | Predicted to enable several functions, including 6-phosphofructokinase activity; anion binding activity; and identical protein binding activity. Predicted to be involved in canonical glycolysis; fructose 1,6-bisphosphate metabolic process; and fructose 6-phosphate metabolic process. Predicted to act upstream of or within glycolytic process. Predicted to be located in cytoplasm. Predicted to be part of 6-phosphofructokinase complex. Predicted to be active in membrane. Human ortholog(s) of this gene implicated in glycogen storage disease VII. Orthologous to human PFKM (phosphofructokinase, muscle). |
description |
---|
ATP-dependent 6-phosphofructokinase, muscle type-like |
id | name | namespace |
---|---|---|
GO:0006096 | glycolytic process | biological_process |
GO:0016310 | phosphorylation | biological_process |
GO:0006002 | fructose 6-phosphate metabolic process | biological_process |
GO:0005945 | 6-phosphofructokinase complex | cellular_component |
GO:0003872 | 6-phosphofructokinase activity | molecular_function |
GO:0005524 | ATP binding | molecular_function |
id | description |
---|---|
K00850 | pfkA, PFK; 6-phosphofructokinase 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_043242212.1 | False | 2780 | mRNA | 0.47 | 22 | 19486992 | 19498261 |
XM_043242213.1 | True | 3030 | mRNA | 0.46 | 25 | 19486992 | 19501085 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
itgb7 | itgb7,LOC107711053,LOC107673468,LOC107667391,LOC107582697,LOC107740576 | coding | downstream | 145 | 19477718 ~ 19486847 (-) |
espl1 | espl1,LOC107711058,LOC107673592,LOC107740575,LOC107667390 | coding | downstream | 9436 | 19465314 ~ 19477556 (-) |
pfdn5 | pfdn5,LOC107667318,LOC107711057,LOC107740577,LOC107673463 | coding | downstream | 22446 | 19462391 ~ 19464546 (-) |
larp4ab | LOC107585124,LOC107711054,LOC107673512,LOC107667382,LOC107740568 | coding | downstream | 25733 | 19448028 ~ 19461259 (-) |
atf7b | atf7b,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698 | coding | downstream | 42381 | 19435181 ~ 19444611 (-) |
myl6 | myl6,zgc:153867,LOC107585121,LOC105013534,LOC108440770,LOC108271738 | coding | upstream | 45944 | 19547029 ~ 19551857 (-) |
sumf1 | sumf1,LOC107673603,LOC107585117 | coding | upstream | 59477 | 19560562 ~ 19568042 (-) |
si:dkey-197j19.5 | efcab12 | coding | upstream | 108715 | 19609800 ~ 19612454 (-) |
uroc1 | uroc1 | coding | upstream | 112019 | 19613104 ~ 19619818 (-) |
chchd4b | LOC107711045,LOC107673517,LOC107580698 | coding | upstream | 119072 | 19620157 ~ 19621083 (-) |
G46540 | mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 | non-coding | downstream | 89262 | 19393477 ~ 19397730 (-) |
G46509 | NA | non-coding | downstream | 244181 | 19212639 ~ 19242811 (-) |
LOC122347223 | NA | non-coding | downstream | 335298 | 19149746 ~ 19151694 (-) |
G46477 | LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 | non-coding | downstream | 438156 | 19044628 ~ 19048836 (-) |
G46476 | NA | non-coding | downstream | 443123 | 19043616 ~ 19043869 (-) |
LOC122347383 | LOC107711016,LOC107673510 | non-coding | upstream | 105277 | 19606362 ~ 19607056 (-) |
G46658 | NA | non-coding | upstream | 290557 | 19791642 ~ 19792328 (-) |
G46647 | LOC107585105,LOC107711036,LOC107673557 | non-coding | upstream | 300158 | 19801243 ~ 19802266 (-) |
G46673 | LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 | non-coding | upstream | 332985 | 19834070 ~ 19838047 (-) |
LOC122347207 | NA | non-coding | upstream | 376227 | 19877312 ~ 19880588 (-) |
vdrb | vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 | other | downstream | 337261 | 19115061 ~ 19149731 (-) |
G46478 | NA | other | downstream | 430861 | 19055146 ~ 19056131 (-) |
G46423 | sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 | other | downstream | 769504 | 18714174 ~ 18717488 (-) |
LOC122347235 | NA | other | downstream | 779396 | 18706623 ~ 18707596 (-) |
G46420 | LOC107752101,LOC107678225,LOC107581302 | other | downstream | 841858 | 18644306 ~ 18645134 (-) |
tsfm | tsfm,LOC107711018,LOC107585120 | other | upstream | 52232 | 19553317 ~ 19555942 (-) |
tomm6 | NA | other | upstream | 340394 | 19841479 ~ 19842994 (-) |
tspo | tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 | other | upstream | 341959 | 19843044 ~ 19847432 (-) |
LOC122347177 | LOC107584418 | other | upstream | 398587 | 19899672 ~ 19956730 (-) |
mustn1a | mustn1a | other | upstream | 497547 | 19998632 ~ 20000638 (-) |