tomm70a (tomm70,tomm70a,LOC107659020,LOC107696780,LOC107574490)


Basic Information

Item Value
gene id tomm70a
gene name tomm70,tomm70a,LOC107659020,LOC107696780,LOC107574490
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13407566 ~ 13416487 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242215.1
TGTAAAGGAGGTGGTTCGTCGGTGCGTGCGCACGTTAGTTTGTGAGTTTGCGCGTTAGCTGGGTGCTGCTGCGTGGATGATGGCTGCGTCGAAGCCCGTAGAGCCTCAGTCTGGGAGTGGGCTCCCCCGTTGGCAGCTAGCGCTCCTTGTCGGGACTCCGATCGTCCTCGGTGTCGGAGCTGTGTACCTGTGGAACCGAAGTCGCGGCAAAGAAAAACAAGGGAAAAGGAATGGGGAGAGGAAAACCCCCGAAGGAAGCGCTAGCCCTGTTCAGGGCCAGCACGGTGCGACCAACCCAGAGCTGGAGAACATGAGTCCCCTTGACAGAGCACAGTCTGCTAAGAATAAGGGCAACAAATACTTTAAGGCTGGCAAATATGAGCATGCCATTCAGTGCTACACGGAAGCAATCAGCCTATGTCCCAAAGAACAGAAAGGAGATCTGTCCACCTTCTACCAGAATAGAGCTGCAGCCTATGAGCAACAGctgaaatggacAGAAGTGATACAGGATTGCTCTCAGGCAGTCGAGCTGAATCCCTGCTATGTAAAGGCCCTTTTTAGGCGTGCCAAAGCACTGGAAAAGCTGGGTAACAAGAAGGAGTGTTTAGAAGATGTGACGGCAGTATGTATTCTGGAGGTTTTCCAGAACCAACAGAGCATGCTACTCGCAGACAAGGTTCTGAAACAGCTGGGAAAAGAGAAGGCCAAAGAAAAATACAAGaaCCGGGAGCCCCTTATGCCATCTCCTCAGTTCATCAAGTCCTACTTCAGCTCCTTTACGGATGACATAATTTCACAGCCTTTacagaaaggagaaaagaaagatgaggATAAAGATAAAGAGGGTGAGGCCTCAGAGGTTACAGGAAGctcagGCTACCTAAAGGCTAAGCAGTATATGGAAGAGGAGAACTACGATAAAATCATCAGTGAGTGCACAAAGGAGATCGAGTCTGGAGGCAGGTACACAGCCGAAGCTCTTCTCCTGAGAGCCACCTTCTACCTACTGATAGGAAACGCTACTGCTGCACAGCCTGATCTCGACCGTGTCATCAACATGGATGATGCCAGTGTCAAGTTACGTGCTAACGCGCTCATTAAACGTGGAAGCATGTacatgcagcagcagcagccccAGCTTTCCACGCAAGACTTCAACATGGCTGCAGAGATCGACCCCCGTAATGCAGATGTCTACCATCACAGGGGACAGTTGAAGATTCTGCTGGATCAGGTAGAGGAGGCTGTGGGAGATTTTGATGAGTGTATAAAGCTTCGACCAGACTCTGCACTTGCCCAGGCCCAGAAGTGTTTTGCATTGtACCGACAGGCCTACACTGGAAACAACCCATCCCAGGTTCAGAAAGCCATGGATGGTTTTGAGGACGTCATTAGGAGGTTTCCAAAGTGTGCTGAGGGCTATGCTTTGTATGCACAGGCGCTAACAGACCAGCAGCAGTTCGGTAAGGCAGATGAAATGTATGACAAGTGTATTGAACTAGAGCCAGACAATGCCACAACATATGTCCACAAAGGTTTGTTGCAGCTTCAGTGGAAACAGGATCTGGAAATGGGCCTTGAACTCATTAGCAAAGCCATCGAAATTGACAATAAATGTGACTTTGCTTATGAAACCATGGGAACCATTGAAGTCCAAAGagGCAATCTGGACAAGGCTATAGACATGTTCAACAAGGCCATTAACTTGGCCAAGTCAGAGATGGAGATGGCCCATCTCTACTCCCTCTGTGATGCTGCTTATGCCCAGACAGAGGTGGCCAAGAAGTATGGGCTCAAGCCTCCCACTCTATAACTTTTGCCTCCTTTTGCCACTCTCTACTGCCGGGCCACAGTAACCATCCCattaccctttttttttctttttgtttttttgtacttcaTTATAAAGATGATAATTGTCAATGAAAAAGAAGGCCGGACAAGTTCTGCTACCACGTGTTTACACTAGTTGTTATGAGTACTGGAAGGTGGCACAGGAAATTGTGGAGGAGCGGCAAAAAGAATCAAGATAAAGCAGAAAGCAAGTGAAAAAGACTGATGGCTGCTTTGTTTGATATCAAATCATCAGTGGCATAGCTCAAATCCTCCCTCATTGAGTATGGCTTAGGCTATCTTGCAACTTGCAACAGTACTCATTTGTTCATGTTCAGCCTCCCCTGCCAATTGGTGTGACAAATGTGAATCtttttgatttatataattttaatttaattgtcaaCTACAGACATTGGGGTCCTTaatcagtacttttttttttttttttttttctcctttccaTCCAAGACACCAGATTAAGTTTATACCATTATACCAGTGTATACCATCAGCAGGACTGCATTATTGATTCATGGTTTGATGCTGTAATGTGCTCAAGGTTTGTCCTTTCACTGTCACATCCTAGCAACCTTATTTATGGTCTTTGTTGTATGGGAAGTGAAGGATTAAAGTTTTAGTTGAGATGTATTTGTGTTATAAATCTGTTCTTGATGTGTCACTGCTGTAATGACACTGTGTTTATAAGAAGGGGATTATATTGAAGTTAAATGCAAAATTTGGCCATActgttattcatttttgtttctttttacctcaagttttttttttttttttttttttacattctgtgctgcatttaataatgtcaatacaaattataatatCCTGTAGAAGATATTTAGcatatgaaaaaaatcaaatggtACAACAAATTTTAAAGCCCTGTACAAGAATTTAGCTGTGAAATCACCTTGCCCATCTCTTCAAAGTGAGGCACAAAAGTGTTACATTTTGAAAGCTTATCTGTGAGAaacattgcatttctttttttgagcaAGAACATGAataaatctagaaaaaaaacattaatcacCAAAATTACATTCCTATCATTTTATCTTTCAAACTGCACatatctgattttatttttgtttagtttctctttgaaataaaaatgtcattgagGTGTATGACTCCCTTCTTTATAAATcctaatgaaagaaaataaaaggaacACCTTACATTTAGCAACTAAgttcttcctccctggtcttttgttcaaaatttgcattaatttgTAGTCTTGAGATATTAAGGTACTTTTGTATATGTAGTGCTATAAATccctgttttcttttaatttgagAATGGTGTTTTTCctgttcatatttaataaaaccataacttttttttttgactactGTAGCCATGACTACTGTATCTACCTTCATATCCATCTTAAAGGAAATTCATTCTATATTGTTTACctgtttaagtttgttttatgacatcaacaaaaacaaagtggCATTACTGtcttttacatataaattgagatattttctatttttaaaccatTGTTGATTGAATGTGTAACATGGTTCGGGACTTGGCCTTTAACCTGAACATAACTAATAGTTTACAAAAAATAGGATGTGACCATTTCcctgtatgcatgtatacattgaTCATTAAGCATTGCATAATATGTAGATGTTTACATATGTTTGCTTATTTCTGTTTCCAGTCTGATCGATTGGTAGTAATGGATTTACAGACCAATTTGAGGGAACAATTCAATCAAGACTGCTGCATGTTTGAAGAtaactgtttaaaatacattttacaaatgcaaGCTAAGTGACACCACCTAAaggttaaaaattaatttgttgtgTTTGATCTATTGAAAGTAGCTgtgcaataaaactaaaaactcctcaagtaaaaataaatacaataagaGGGAAAAATGTGATGTTGGTAAAGTGTGTAATATTACTGTAtgataatatcaaataaaaaaatgagttgCCCACAATTATTCATAAAGCCAA

Function

symbol description
tomm70a Acts upstream of or within ventricular cardiac muscle cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; musculature system; nervous system; and optic vesicle. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human TOMM70 (translocase of outer mitochondrial membrane 70).
tomm70 Predicted to enable mitochondrion targeting sequence binding activity. Predicted to contribute to protein transmembrane transporter activity. Involved in several processes, including cellular response to virus; positive regulation of interferon-beta production; and regulation of defense response. Located in mitochondrion. Biomarker of congestive heart failure.

NR:

description
PREDICTED: mitochondrial import receptor subunit TOM70

GO: NA

KEGG:

id description
K17768 TOM70; mitochondrial import receptor subunit TOM70

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242215.1 True 3857 mRNA 0.40 12 13407566 13416487

Neighbor

gene id symbol gene type direction distance location
tbc1d23 tbc1d23,LOC107731832,LOC107590650,LOC107574489,LOC107752629 coding downstream 484 13390703 ~ 13407082 (-)
bcl6aa bcl6,LOC107717934,LOC107752633 coding downstream 298342 13086100 ~ 13109224 (-)
trnap-cgg_1 NA coding downstream 436017 12971478 ~ 12971549 (-)
trnap-ugg_5 NA coding downstream 436412 12971083 ~ 12971154 (-)
im:7152348 LOC107717945,LOC107694124,LOC107590683,LOC107752641,LOC107696753,LOC107552260 coding downstream 436938 12967100 ~ 12970628 (-)
trnaa-cgc NA coding upstream 4160 13420647 ~ 13420718 (-)
trnaa-cgc_1 NA coding upstream 4342 13420829 ~ 13420900 (-)
trnaa-ugc_1 NA coding upstream 4833 13421320 ~ 13421391 (-)
trnaa-cgc_2 NA coding upstream 5137 13421624 ~ 13421695 (-)
trnaa-cgc_3 NA coding upstream 5318 13421805 ~ 13421876 (-)
G44942 NA non-coding downstream 50045 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 52783 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 53386 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 53916 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 54497 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 120457 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 276851 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 281012 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 407185 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 420818 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 509848 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2338100 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2422434 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2572041 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 238773 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 301715 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 743988 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1911096 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2072631 15489118 ~ 15490685 (-)

Expression


Co-expression Network