zbtb11 (zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487)


Basic Information

Item Value
gene id zbtb11
gene name zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13562045 ~ 13569922 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242247.1
GCAGCAGCCATTTTGTCTGTTCAGGCAAGTCCACCCCACACGGTCATGAACTGACGTTCCCCCTtggaaaacatttcagaaatatCCCACTCGATACTTTTCCGCGTCATCTATGGAAGTGGAAACGGGCTGAAAAAATACCTCGTTGAATTCTACACCCGAGAATAGCCCTGACTGGCTGATGCGTGTCGTTTCTGTTGCGTGAGCTTCATTAATCGGCGTTATGTCGAGCGAGGAGAGTTACTTAGCCATCCAGCGCTACTTGACTGATGAACGTGAGCCTTACGCACCGGGCACGCACGGCAACACCAAGAGGAAGATCCGGAAAGCGGCTGCTTGTTACATAGTGCGCAACGGGATTCTTTATTATCAGAGGCGGCAGAAAGGCCTGGATGAGTTCACGGAGCTGGAAGTGGTGCTGCAGGCCGAGAGACGGAAGGAACTGATCACGGAGGCGCACATCACGTCCGGAGGGGAACACCTCAACCAGCAGCAAACGTGGGAAATCATCTCCCAGAAGTACTGGTGGAGAGGAGTGCTGAAGCAGGTTAAGGACTGCATCAGAGAGTGCAGTTACTGCCAAAGCAAGCAGGAGAAGGGAAGAGGCGGTGCTGAAGATGCCACCAAACAAGCAACTGTCCGACAGGCGAGAAGAAAGACATCTGTATGCGCCAGCGAGGAAGAAGACGACGAGGCAAATGAGGATTTGGATTCGGAGCAGTCCAGCGCAGTTGATAAACACGAATTGGTGTTTGTGGACAGTAAGGGAATTGTCAAGCAGTTCTTACCAAAGCATGGGCAGACGATGCTGGACAAGTTGAACCAGCAGCGAATGAATAATGAATTCTGTGATATCACCCTGCTTATTGAGGGTGAGGAGCATCGAGCACATAAAGCTGTCCTGGCCTCCTGCAGTGACTATTTCTACGAGCTTTTTGTGGAAAAGGGTGCTATGACCAGTCACGAAGCTGTCGTTGACCTCTCTGGCTTCAGCAAGGCCAGTTTTCTACCATTACTGGATTTTGCCTACACCTCCAATCTGACCTTCAACTTTTGCGTGATGGCAGAGGTCGCCACATTGGCACGGCACTTACTGATGGCGGAGGTGCTTCAGATCTGCGAGTCCGTGCATAAGAAAGTAGAAGAGCAGAAGCTGATGGTCTACCAGAGAGGAGACATTCACACTGTGGTATCCAGCCAATCTGCGCCCCCTCAGCCAATCACACCCACCGCTTCCGAAACCTACGTAGTGACTATGCAGAGTGAAGGTACGCCTGAAGAAGGGCAGTCCCTGGCTGTAATCACAAGTGAAATCGGAACGGCTGAATCGCTGGCGTTGCTTGCCGGTGCGACCGTAGATGGAGAAACGATGACTGTAGTCACTCACAGCGGACAGGCGGGCTCAGCGGAGTCGCTTGCCATGGTGGCCCACAGCGGACAGGTAGAAGAGGGCGAGACTATGACTCTGGTCACTCACTCTGGCCAGGCTGGTTCGGGTGAGTCCCTGGCTGTAGTACAGGCCTGTTGGTCTGTAGAGGAGCCACAGGTCGGTGACGCACCTGTCGGAGAGAGCATGCAGACCGGAGCCTTTCTCATTAGTGTTGATCCTGGCAAGACAGATGCTTCTGACATCGTGCATTTAGCCGCAGCAGCGCCACCTGCTGTGCAGGATGAGCCCCAGGCGCCTGAGCCAATGTGCCAACCTGAACCTACAGCAGCACCGCCGCCGGCCCCTGCACCGGTGAAAAGAAGGCCAGGAAGACCGCCTAAAGTGAAGCAACAGGAACCGCCCCCTCCTCCTTCAGAGGACGAGACAGCGGAAATGGAGGGTGTTGAGGATGGATCCCCTGCggatggagagaaaaaagaagaggaatGTGTAGATCCCAACAAGAGATACCTGAGAAAACGGTCCGTGAAGGAAGGAGGGTATGTTCGTCTTCATATGGGACTTGAGActgaggaggaagagaaaagcACCTCGCCTCTTACAAAGACACCTCAGAAATTTGCCAGGAGAGGCCGCCCAGTTCAATCTGCCAAGAAGAATCTTGAAGAGTTTTCGGAGACAAACCTGGAGGCTGCTTCTGATGCCGTAGCTGCTTTAGCAGAGGAACCGGAGCCTGTTGCAGACCAGCCAGAGATTGTGGAGGGAGGTGCACTGCAGGGAGACCCAGGAGGAGCTGCAGAGGGAGAGCACTCGTGTAACGAATGTGGTTTGGTGTTCCACAGGCGCTACGCCCTCATCATGCATGCTCTGAAACACGAGAAGACTCGCAGCTTCAAGTGCAGCATTTGCAATAAGGAGTTCCAGTACGCCGCTTCGCTCCGTGCGCATTTGGCTCGTCACAAGCATCAGAAGACCCAGAGAGCCAGCATGACAAGAGCATTGGCCGCAGAAGATTCTCAGGGGTCAGAAGATCAGACGAAGTACCGCACCAAACGGGAGTTTGTGTGCGACATCTGCGGCAAGACTCTGCCCAAGCTGTACTCCTTGCGCATTCATATGCTGAACCACACGGGGGTGAGGCCACACACCTGCAAGGTTTGCGGGAAGAGCTTTGCCACCAAGCACAGTCTGAAGATGCACCGGTCTCTGCACGACTCCCTCAAGAGATTTCAGTGCACTGTCTGTGACAAATCTTTCGTCACCAAGAGAAGCCTGGAGGAGCATACAAGCATTCACACAgGTGAATCCAAGTACTTATGCACAACCTGTGGAGCGTCTTTTCACCGTGCTTCCGGACTAAGCAAACATCTCAAGAAACATCAACCCAGACCTGAGGTCCGCTCATTCCACTGTTCTCACTGTGATAAGAGTTTCTTTGAAGCAAAAGACCTGCAGCAGCACATGAATAAGCACTTAGGCCTAAAGCCCTTCCAGTGCCAGGTCTGCGGCAAATGCTACAGCTGGAAGAAGGACTGGTACTCGCACGTCAAATCTCACACCGTGGCAGAGCCCTTCAGGTGTAATGTGTGTGGGAAGGAGTTCTTTGAGAAAGCCCTGTTTAGACGGCATGTCAAGAAAGCCACTCATGGAAAGAAGGGCAGAGTGAAGCAGAACTTGGAGAGAGAGTGCGAACACTGTGGGAGGAAGTTCACCCAGCTCAGAGAGTACCGCCGCCACATGAATAATCATCAGGGAGTGAAGCCCTTTGAGTGTCTGACCTGTGGCGTCGCGTGGGCCGACGCTCGTTCTCTGAAGCGGCACGTTCGCACTCACACGGGCGAGCGCCCTTACGTGTGCCCGCTGTGCCAGGAGGCCCACATAGACGCCAGAACGGTTCGGAAGCACATCACGAAGTTCCACGGAGATCAGCTGCCCGGCAAGATCATGCTGGAGAAGGACACGCTGCAGTTCCACAACCAAGGCACGCAGGTGGAGCACGCCGTCAGCATCCTCAGCTCCGAGCTGCCCCCTGAACTTCAACCTCCGCAGCCTCCCACCACCGAGGAGATAGAGACCGTGCTCATCACAGAAGAAACGGTGGAGGCCGTGCAGGCTGTGAGCGAGGGAGCCGTGGCCACGTTGTCCGATCAGAGTATCATGCAGGTGGTGAACTATGTCCTGGCCCAGCAGGCCGTGGTTAAAGTGGAAGAGGGACCGGAAATCATCCAGACCATGGAAGTGGAGGTGGCTCATGTGGCAGAGGTGGAATAAACCTTACCTGGCAGTAAAAATTATACGACTACGGGCAGGTTTATTCTCGTTTTTGGTGTCATATGCACTCTgtgtgatgtaaaaaaaaaaatgctcatttatttttttttttgtaaaatgtaaattaaaagaaGCTCCGGGTTCGCTGATGTCAGcgcgagtgtgtttgtgtgtgtgtgtgtgtgaatcggTGCATGGTGTGGATGTGTGAAGACGCTCGATTTGCTTTATAATAAACTTTTGTGTACATGTGTACATAAACGTGAGGATTTCCATTGTAATACAGTCAAAATCAAGCATACGATAAATGAATTGCAATATAAACATTTGGCTTTTTTTGTAACTAGGttacattttctcattattaaggctgtttatttttctttttgattatttgtaaAGCTTAGCTGAGATATAAGCTCTAACAATCTTAGCTAAAGGGCCATAGGCTCTTGTCTGTTGTATAATGCGGTGCCTCTCAGTCTCAGCTGAGTACTATGTATAGCAGCAGAAACgacaaccaaataaaaaaactccCTGTCTGCAGGGATGCACCATGTGCTATA

Function

symbol description
zbtb11 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within neutrophil differentiation. Predicted to be active in nucleus. Is expressed in head; intermediate cell mass of mesoderm; and nervous system. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human ZBTB11 (zinc finger and BTB domain containing 11).

NR:

description
zinc finger and BTB domain-containing protein 11

GO: NA

KEGG:

id description
K10498 ZBTB11; zinc finger and BTB domain-containing protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242247.1 True 4227 mRNA 0.52 10 13562045 13569922

Neighbor

gene id symbol gene type direction distance location
dipk1ab fam69a,fam69ab,LOC107590645,LOC107659006,LOC107566484 coding downstream 1020 13543207 ~ 13561025 (-)
evi5b evi5,LOC107590647,LOC107692341,LOC107566483 coding downstream 26605 13496135 ~ 13535440 (-)
gfi1ab gfi1,gfi1ab,LOC107659005,LOC107590681,LOC107692343,LOC107566482 coding downstream 66449 13489950 ~ 13495596 (-)
glmnb glmnb,LOC107659021,LOC107692340,LOC107590673,LOC107731827 coding downstream 83134 13471896 ~ 13478911 (-)
trnaa-cgc_55 NA coding downstream 94106 13467868 ~ 13467939 (-)
dpt dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436 coding upstream 8870 13578792 ~ 13585368 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107548663 coding upstream 37594 13607516 ~ 13638945 (-)
mrpl47 LOC107659009,LOC107732024,LOC107590634,LOC107709209,LOC107692352,LOC107548661 coding upstream 121104 13691026 ~ 13692826 (-)
lrrc7 lrrc7,LOC107709201,LOC107692363,LOC107739104 coding upstream 416125 13986047 ~ 14040163 (-)
cldn33b LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 coding upstream 556652 14126574 ~ 14128317 (-)
G44942 NA non-coding downstream 204524 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 207262 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 207865 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 208395 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 208976 13352462 ~ 13353069 (-)
G45036 NA non-coding upstream 123416 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 127577 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 253750 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 267383 13837305 ~ 13837538 (-)
G45064 NA non-coding upstream 272812 13842734 ~ 13848641 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 664327 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2492579 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2576913 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2726520 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 85338 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 148280 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 590553 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1757661 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 1919196 15489118 ~ 15490685 (-)

Expression


Co-expression Network