lrrc7 (lrrc7,LOC107709201,LOC107692363,LOC107739104)


Basic Information

Item Value
gene id lrrc7
gene name lrrc7,LOC107709201,LOC107692363,LOC107739104
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13986047 ~ 14040163 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242271.1
atccattcagcaGAAATAAGGGACAAGATGGATAGAATGCAAGAAGACGCGCGCGGGCCGTAGCTACAGACTCCCGTCACGACATGTCACTTGTCATGACAGAGACGTCTATGGGCTTCATCGAATATGCGTAACGAGAGAAGCAGACACGATTTAATCGTTGGCAATGAACTTGAATTTCCATTCCTCCACATTAACGGGAGGGAATGGCTCAATACACAGATTCCTAAATGCTTTGGAACATAATTCTTTTTTCGCTTGATCTCAGTAAGACATCAGTAGAGCAGTCTGTCAGTGCTCAGCGCATTATGTCCGTTCAGTGCTGCATTGATGTAAGGGAAACGCTGGAGCGGAGGACAGACCGAAGCGTCGTGTGATGTGACTCGTGTCTCTGGGATTAGCCTACTGCTGGAGTACCAAACAATCTGTAGAAATAGTCTAATGGACAATTACTCAACGCTTCAGTTGCAGTGTCTGGAGATGACTACTAAGAGGAAGATCATCGGCCGCCTGGTGCCCTGTCGATGCTTCCGGGGGGAGGAGGAGGTCATCTCAGTGCTGGATTATTCCCACTGTAGCCTGCAGCAGGTCCCTAAGGAGATCTTCAGCTTCGAGCGCACGCTAGAGGAGCTCTACCTTGACGCCAACCAGATTGAGGAGCTGCCTAAGcAACTCTTCAACTGTCAAGCACTCAAGAAGCTGAGCATGCCTGACAATGACCTCTCCAACCTGCCAACCACCATCGCCAGCCTTGTGAATCTAAAGGAATTAGATATTAGTAAAAATGGTATTCAAGAGTTTCCAGACAACATCAAATGCTGTAAATGTCTATCAGTTGTGGAGGCCAGTGTAAATCCTATAGCCAAGTAAGCTCCCAGACGCTTCACCCAGCTCCTCAACTTGACACAGCTCTTCTTAAATGACGTCCTTGAATACCTGCCTGCCAATTTTGGGAGattATCTAAATTACGGATCCTGGAACTTCGTGAGAATCATCTGAAAACTATGCCAAAGTCAATTCATAGGCTGTCGCAGCTGGAGCGGTTAGACTTGGGAAGCAATGAATTCTCTGAACTGCCAGAAGTATTGGAGCAGATCCATAGTTTAAAAGAGCTGTGGTTGGACAACAATTCATTACAAACCATACCAGGGTCTGTTGGGAAACTGAGGCAGCTGCGATATCTAGACTTGGCTAAGAACAGGATTGAGAGTCTAGATGCAGATATCTCTGGCTGTGAGTCCTTAGAGgatctcctcctctcctccaaCATGCTGCAACAGTTACCTGATACAATAGGAAAGTTGAAAAAGTTGACAACATTAAAAGTTGATGACAACCAGCTCACCTCACTGCCTAACACCATTGGAAGTGCACGTGGCAAAACCGGTTTATCACTTTTAGAGGAGTTTGACTGTAGCTGTAATGAACTGGAATCCCTGCCTCCCACCATTGGCTACCTGCACAGTCTTCGGACATTTGCGGCCGATGAGAACTTCCTGTCTGAGCTGCCCAGGGAGATTGGAAACTGCAGGAATGTTACGGTCATGTCCTTGCGCTCCAATAAACTAGAGTTTCTGCCTGATGAAATTGGACAGATGACAAAGCTACGTGTTCTCAATCTAAGTGACAATAGGTTAAAGAATCTTCCCTTCACTTTCACTAAATTGAAAGATCTTGCTGCACTCTGGTTATCTGACAATCAGTCCAAGGCCCTTATCCCCCTTCAAACAGAGGCTCACCCTGAGACCAAACAGAGAGTCCTTACCAACTACATGTTTCCTCAGCAGCCCCGGCACGATGAGGATTACCAGTCTGACAGTGACAGCTTTAATCCCACTCTCTGGGAAGAACAGAGACAGCAGAGGATGACTGTGGCATTTGAGTTTGAGGACAAGAAGGAAGAAGAGGACAACTCAGGAAAAGTGAAGGTTGAGATTAATCTGAAGCGCTACCCCACCCCTTACCCAGAAGACCTAAAGAACATGGTGAAGTCAGTGCAGAATCTGGTGGGTAAAACCACTCACCCCAACACTGAAAAATGCTCTTCTGGGACCAATATGGAGCTCCACAGCCAAGACAAGTATGAGCCCAAGTGGCCCATTGCTCCGAAAGAGGTGACAGAACGAGAGGTCAAAGACTTCTCAAAACCACCAATGTCCGATCAAGGCGTCATCCTCAACTCAGCCATTGACATCCCAAAACGCAAAGACAAAGAGGATCTGACTGAGAGCTCGGAAATTTCTTTACATCGCGTCGTTCCCAAGCCGCAACAGCCAGAGAATACGAGCCTGGCCGttacttcctcttcctgtttctGCCTCATAGACTCCATGGGAGGCTCCCCTAATGATATCCGAATTTCTGACATGCGGCCGACTTTGGTAGAGCCACCAATGTACAAACCAAAGGTTGTGTTACTGGGCAAGGAAAAAAAGGTTGAGTCCACCGATGAGTCTGAGCCGgacaaaatgcattgtttgaaCAACAGCGGATCATCTGCCACTTATTCAGACTACTCACCCTCCCAGGGATCGTCTGGCTCCTCCAACCCACCTGGAAATGTCAGTAATCTGCAAACATCTGGGAAAGAGGGGCCAGCACAGACTCACTGGACCAACAGGCTGGCTCAGTCTTTTCCAAAGCCCATTGAAAGCAAGCCCCTTCTGAGCCAGAGGGAAACACCTCCATCCAGCACGCTGCAGCAGCGAGGTGAGAGGCGGCCACTGAGCGACACCTTTGACAGCTGGAACAACGCCCCCCACTACGATAACACAGGGTTTGTCGCAGAGGAGACGCCTCTTGACACTCCGAGCAGCAGCGCTGGAAACCCCATGCTAGGCTCAAAGCCCCGGAGTGCCTCGATGGCGCATGGCCGACGGCCTCTCATGAGACAAGAGCGCATTGTGGGAGTCCCTCTAGAGCTCGATCAGTCGCAGCTCACGTTCCACACTGTTCGCAACCCTGAAACTGAAGTGCCTGCTCCTAACCCCTGGCAGAACTGGACGAGGACTCCCAGTCCCTTCGAGGACAGGACAGCTTTCCCTTCAAAGTTGGAAATTACTCCAGCCAACAGCCCCAATCCTGATCGCAAGGACTTTGAACAGGAGATGGGGGAACTACCCGGCACTTTTCCCTCAACTAGAGCCTGGGGTTTCTGGACTCTACGGACTCAGGGGACGGGACGAGGTCATCCCAACATTTCTGCGCATATCCGGCGAAAAGAACCAAACAAAGTAGGCACTATGGTCATCAGCAAGAGTTCTGAAAGACTTTCCCCAATGATGAAGGAGGTAAAAGCGAAATTCAAGAAATCACAGAGCATAGATGAAATCGATATGGGGTCGTATAAGGTTTACAGCATTCCCTTGGACAGCTACAGTTCTAGCATAGAAAACCAGGGAAGTGTTGATAGAGCGGACCTACCTGTACCTCTAGAACAGAGCATGTCCAGGAGCCAATCTGCTCCAATGCTGGACGACGATCTGGATGGCTTTGGTTCGAAAATCTCTCAGCAACAGAAGCCAGATCCCAAAAAAGTTTACCATTTTGACCAAAGCTTCAACCCACAAGGAGCCATGGATGTTATGAAAGCGGAGAGGAGAGTTCCTCCACCGTTCCCTAATGCCCCTGAATACGTGAACCAACCTGGGAAGACGTTGCCAAAGGAACTTGTGAGCCCGAGAGGCTACCGAGGCTATCCACCAATGGAACAGATGTTTTCATTTGCTCAGACTGCAGTCACCGATGACGCCATCAATCAACAGCTCTCGGTCCAGCCCCAGCGCTCCAGGCCGGGCTTTCTGAGGCGCGCTGACTCTCTGGTAAGTTCGACTGAGATGGCGCTGTTCCGCAGAGTAGCTGAAAGCCAAGAACTGCAGCTGGCGGAGCACTACAACAGGTCTCAACAGAGCATGCTCGATCAACAGAACAGCTTGGCTACCATCACTGACGCCCAATTCCATAAGAGGAACGGTAGGTATGACGAAGACTACTCGTCTTATCAAGAACCCAAAAAGCCCATCATGGGTTACCCCACCAAGAGTCTGACGCAACGTCGCCCCCTGTCTGCACGGAGCTACAGCACAGAGACATATGGGGCATCTCAGGCAAGGCCAGTGTCTGCCCGACCCACCATGGCTGCGCTGCTGGAGAAATTGCCTTCAGATTACAATCTTAGTACGTGCACTGAGAAGAGCCCTGAAACTGACATGAAGATGAGACATCCTCAGAAACAAGAGGACCCCACCTCCAAAATGCCAGTAGATTGGAGACAGCAGCTGCTTAGACATATTGAAGCAAAGAGGCTAGACCGGAGCGCTGTCCTTAAGCACAACACAGTAAACTTCGGCATGCTGTACTCTGGAGGCTATGCTGCACCGCATGCCAGCAGAAGCATGACAATAAACTTTTACAATAACACAAAGCATGAAAACCAAACAACTCAGTGGCTACCTCTACCAAATACACCTTCACAACAGAGCAATATTTTAGATAATGGACAAGAGGTGGTTTCCCCAAGTAGCCAGTGGGCCCCGTATTCACTGGGAAGAAGAGACGTGCCACCAGAGAACATGAATGTCATCAAAAAGCCTGGCGTTCACAATCCCCATCAACAACAGACTATGATGATAACCTCAGCCAACCCTCCCCACCGGACGGCCCGCGACCAGCAGTATGAGGGGGCCATCAACAAGGTGTCCATCCAGCAGTACCAGTCGCCTCTGCCCATGCCCATCACCACCACCAGCCCCCGGCCTCAGAGCGCCCGCTGCTTCATCCAGACTAAAGGCCAGAAGAGTATGGACGGCTTTCCAGAGCAGCTCTGTGTGAGAATAGAGAAGAACCCTGGCCTTGGTTTCAGCATCTCAGGGGGAATCAGTGGACAGGGGAACCCCTTCAAGCCCTCGGACATGGGTATCTTTGTTACTAGGGTACAGCCTGATGGACCTGCCTCCAACGTTCTTCGACCAGGGGACAAAATTCTGAAGGCCAACGGACATAGTTTCTTACACATGGAGCATGAAACTGCAGTGTCTCTTCTGAAGAATTTCCCGAAAACTGTGGACTTGGTAATCTTAAGGGAGAGcacaacataaatatttttatagcttAAAGACTTCTCACCCAGATGGAACACAGGAACTTGTACATCTTCTTTTTATCTAGGAACAATTTTGCCAATTGCTGGACCAATGGCAAATTCCAGTGCCAAATGTACACTAGAGGACATATATAATAACGTTACATATGGCTTACACATTCTACACGAACATACATTGGTTGAAATCTTTGGTTGATGTTGCTGATATTCTTCTTTATCTCAGCCTGTGGCTGTAAGTGGGTGCATTTTTTCCTGCTTATTTATATGGCGTATTATTTTGTACCTATTTTTCCTAGCAGCTTTTCGGTTTAATCTCGGAGCATGAAAGCACATCTGCTTTTAAGGACATTTACCCACCATAACACTGCCTCAACTTTGTAAATGCcttgtgtaaatatatacatttacaactCAAATGTGATAAGAGCGTAGAATGTGAATGAAAGACACATTGATGATTTTCTAACACATCAATGAGTTTTTGTAACAACTTAGAAGAGACATCTTTCTCACAAAAACGACAATTTAGGGAAATCGAAAAGTCCCCTTTTAATCTTGATAGATCCTAACCTTCTGTATTTGCACAAATCAAATGACAGAAATGAATCCCTAAGCAATATTTCTTCCATTTGTGTGGCTTTCCTGCAGCACCCTCTATTGGTATTCATGGATTTTCCCTAGCCCTGATCAGGGTGGGTTTTGTTCAGTTGCTAAGTAATGTGAATGTacatttccatgtttttttctttttttgttttttcgttTCCGTTTTTTAATTCCCACGTACCTTTGTTGGCTGCCAGGAAAATTCATACACACGTGGCAGTTTATTGGCAACGCGGTTTTCTATATAAACATGTACTTTCATATCGCGTACTACGGTTTaagtgaggaaaaaaagggcaaaaaaagcttaattcaAGTTGCTTTGTTGTTGTTACGCTGCtttaaggtttttaaatatttttttaacaaaataaaggGAATTCCTGTCATAATAAAACGGACTAGATACAGTGTACACATGTAAGGCTTTACTGATTAGAGCATGCTTTCACtcttaaacttgttttattatgaTGCTTATTAGGGGTCAATGTGTTTTGGACAAAGCATTTTTACATAACCATTGTTTTACATCTCTTttggccttttttattttttttccttttttatttatttatttatttatttttaaatccgTCATTGTGACAAACAGTGCCATAATAtccctaaaaaaaaatctaaaacaaaccCTGGGCATGTTTCaaatgttgctaaaaatgtagcatttagAAGGAGTTATGAGCCGAAATGCATTCAGAAAGACCCCGACACAACACCCACTGCATTTAGCTTCAGAGAAATATCgttgattattaaataaagattattatggatgatgcaattaattgttcaaATACTATTGTGAAAGAACATTtgataatgattatttttactaaatgttttcaaataatggtttctaatatattgatataattagCTATGCTCAAATTGTTAAATTTTATAAAGAACAAAACCAATGTATGGACAGAGAGTTAGATTGCGAGGGAAGGAAACACTAGAAACAAATATGTACAATTCTTTCTAAAGTAATTGTGAATTTGTgtcataaacatatatatgtatatgaatatacaaatggtcatttttgtatgtgtttaaAGACCTATTGAATATAAAAGGTAATATATGGTACTATTCAGTCTAATTGCAGTATTGATGTAAATAACTATGAATggagacatttaaataatttattccaATAGATTGTGAATGTACTTAAAGCTTTCTGCAGTATTAAGACTTACTGAACTTGAATGCCGtttcatttttgtgcaaaaagtaATTATATCTAGAAGAAATTATTCAATTTAGTTCAAAAGAATTAGTGACAATTTATCATatcatttatttgcacatgcaAGTTTACTCCTTccaatttttttctgtattaccGCAAATATGTAATCGATGACATATATTCTGTGTCTAGAATGCATTTTGCAGAtgatatatgtacatatttaaaatcaattttagttaaaaaaaattaaaatgacaaacctGTATAAAAAGGAGAAGAAAGTCCAATGCTGTTCAGCAAATATTGGAGCCATTTTCGGCTTTGGAGtacagatttttttcagtatctAAGAGGTGTTTTGAATAATGTATCTTTAttgtacaaataataaaaatgtcactatTGTTA

Function

symbol description
lrrc7 Predicted to enable signaling receptor binding activity. Predicted to be involved in several processes, including cellular response to tumor necrosis factor; negative regulation of NF-kappaB transcription factor activity; and positive regulation of Ras protein signal transduction. Predicted to be active in basolateral plasma membrane. Orthologous to human LRRC7 (leucine rich repeat containing 7).

NR:

description
leucine-rich repeat-containing protein 7-like

GO: NA

KEGG:

id description
K24055 LRRC7; leucine-rich repeat-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242271.1 True 7338 mRNA 0.44 35 13986047 14040163

Neighbor

gene id symbol gene type direction distance location
mrpl47 LOC107659009,LOC107732024,LOC107590634,LOC107709209,LOC107692352,LOC107548661 coding downstream 293221 13691026 ~ 13692826 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107548663 coding downstream 347102 13607516 ~ 13638945 (-)
dpt dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436 coding downstream 400679 13578792 ~ 13585368 (-)
zbtb11 zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487 coding downstream 416125 13562045 ~ 13569922 (-)
dipk1ab fam69a,fam69ab,LOC107590645,LOC107659006,LOC107566484 coding downstream 425022 13543207 ~ 13561025 (-)
cldn33b LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 coding upstream 86411 14126574 ~ 14128317 (-)
lurap1 lurap1,LOC107709195,LOC107590621,LOC107692438,LOC107591165,LOC107659044 coding upstream 139709 14179872 ~ 14190329 (-)
ttc4 ttc4,LOC107659046,LOC107738930,LOC107709194,LOC107692369 coding upstream 157529 14197692 ~ 14200743 (-)
pde4ba pde4b,pde4ba,LOC107659050,LOC107692372,LOC108443455,LOC107591166,LOC105913193 coding upstream 245334 14285497 ~ 14402960 (-)
lepr LOC107709190,LOC107738956,LOC107692373,LOC107591169,LOC107659051 coding upstream 374646 14414809 ~ 14450272 (-)
G45225 lrrc40,LOC107590628,LOC107709203 non-coding downstream 4162 13981229 ~ 13981885 (-)
G45206 NA non-coding downstream 13953 13911684 ~ 13972094 (-)
G45198 NA non-coding downstream 124602 13861235 ~ 13861445 (-)
G45197 NA non-coding downstream 125229 13860250 ~ 13860818 (-)
G45195 NA non-coding downstream 127930 13853897 ~ 13858117 (-)
G45270 LOC107692440 non-coding upstream 171203 14211366 ~ 14212986 (-)
G45271 sgip1,sgip1a,LOC107739126 non-coding upstream 174475 14214638 ~ 14216276 (-)
LOC122346673 NA non-coding upstream 223626 14263789 ~ 14279029 (-)
G45277 NA non-coding upstream 452958 14493121 ~ 14494022 (-)
LOC122346442 NA non-coding upstream 611553 14651716 ~ 14656031 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other downstream 200144 13718202 ~ 13785903 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other downstream 304753 13655260 ~ 13681294 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 1088329 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2916581 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 3000915 10948692 ~ 10985132 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 120312 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1287420 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 1448955 15489118 ~ 15490685 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other upstream 1495223 15535386 ~ 15685485 (-)
G45606 sec61a1,LOC103358725,LOC108436273,LOC108440718,LOC103023094,LOC106518493,LOC102228108 other upstream 1563747 15603910 ~ 15605470 (-)

Expression


Co-expression Network