os9 (os9,LOC107711069,LOC107585136,LOC107667395,LOC107582707,LOC107733587,LOC107673576)


Basic Information

Item Value
gene id os9
gene name os9,LOC107711069,LOC107585136,LOC107667395,LOC107582707,LOC107733587,LOC107673576
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19251533 ~ 19260149 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242289.1
catttgacaacGCTAGTTTGCGATATGAGAGAACTATGGCTTCCTCCTTGATTAAGTGGTTAAGAggattatatgtttttttcttaacgTGTCTCTTGTCCGTCTTTGGTTTTTTGAATTTAGaagaattaaatgaaatgaaatatggaaTACAGATTCTGCCCGATCCTGTTATTATGGGACAGATGGAAGATGTGATGTTGGTCTCTAACAAATACAAGCAGTTGTATGAGTGTCGTTTGCCAGCTCAAGCGGTGCGTTTTCATCAGGACCCAGTGTCAGAACCTGATGTTCAAAGCTACAGTGGCCCCGGAGTCCCTGATCTCCTCAAGCCCATGCAGACTGCACCATGCCTGGTTAAGaCCAAAGACTGGTGGACTTATGAGTTCTGCTATGGCCAGCACATCAGGCAGTACCACTTAGAAGATTCTGAGATAAAGGGAGATGTGCTTTTCTTGGGATATTATGATTCAGAGTTTGACTGGACCAATGAAACTGCCAAGgCATCTAAGCAACATAAGCTTAAGAGGTATCATAGTCAGTCATATGTCAATGGCTCTAAATGTGACTTAAATGGGAATCCCAGAGAGACAGAAGTCAGAtttgttTGTGAGGAGGGCTCTAGTGACTATATCGCAAGGGTAGATGAACCTCAGTCCTGCCGCTACGTCTTAACAGTACACACCTCTCGTACATGCCAGCATCCCCTCCTGCGCCCACCTTCCACTGCCAAGCCACAAGGCATTGTGTGCCAACCTGCTCTCAGCGCCCAGCAGTATATGGACTATGTCAAGGCTCAAGTCTCTGACACTAAACGTAAAGTGGAGCAGATCTCGGAGGAACTCAAGAACCTGGATGAAATTCTGTCCAAGGATGACAAGAACAAAGGATTGCagaaagacaaaacagaagAGAACCCTGTAGTCGATTCAGATGATCCTCCACTTTCAGAGTCAGAAACAAAAGAAGGTGAAGTAGCTGAGGTGGGTTCAGTGAGTGAAGAACCTGAGGACAAGGACTTCTGGGACGGAGTTACCAAACCAGCAAGCACAGAGTCAAGCACACCTGATTTAGAGAACCCTCAGGAGCCTCAGGACAACCAGTTACATGAAAATGACAtATTCGGAGaggaaaaatttaattttaaaatcatctcAGACCCTGCAGACCTCATGAAATTTGTACAACATCTCAAAGAGAGCAACCAAAAAAACAGGAAAGCCGAACAGGAAAAAGAGAGCCAGCAGTCGTCTCAAAAGGGAGAGAagcaggaagaggaggagaaaagaaaggtggaggaagaggaaggggaTGAGGATGAAAGATTGCTGCAAGAGTTTGAGGATGAGATGGCAGATCTGACCGTTCCCTCCTCCAAGATAGAGGAGATAAAAGAAGAGATGCAGAAAGAGTTTGATAACATCATAGAGGAAGCTCAGCAGGAGTTAGAGAATGAAGGTCTTAAGGGCGAGTTTGATCGCACTCAGGCTACACAAACTCTAGAGAACACACTGGGGAAACTTCTGGACCGTCTTGAAGACAAGACCGGACATGAGAGtgaaactgaaacagaaaaaaatacagagatgCATAAAAACACTCACTCACAGCATAAGACAGAGGAAGGCTCTTCTTCTGCCAGCCCAAACCTGGTTCCCAAAACACCAGCCCAAGCGGGCAGCAGTGGTGAGCAGGTAAAGGTCAGGGTGACTAAGTATAAGGTGGGCGGAGGTGTGGCTGCAGGAGCGGTTACCGGGGGCAACGATGATGATGAGGGGGGTGTGAAGGTGAAGGAACTGGGCGAGGGCGACCCCCAGTGGCAGCAGATTCAGGAAGTGGTCAAAGAGCAGCTAGAGAGAGCCGGCATCAAGGCCGAAGGAAAGATTGAGGTGAAGATTTTAACCCGTAAAACAGCAGAGGAAGCAGGAGATCAGTGGCTCACTGAAGAGGATACAAAATCATTTAGAGAGCTTCTCATCAACCTTCTGACGGGAGGTACGGAAGAAGTGTATAAAGAGCAGAAAAGACAGCAAGAGTTGGAGAATAACTACAAATTTGTCTGGGGAGAAAAACAGGAAGACAGCCAGTCCACAGGAAACAGTGATTCTGATGAAGCAGACTTTTGAgccttttcctcttttctcaAGCACTATTAAACCTGAAGAAGGGCAGCCAGCGTTCTCTGAACTAGAAACTGTCAATCAAACTGCTCTCTCAGACTGTTTAAGTCATGTGAGCCCTGTGAGGGGGTCAGTCCACTGCCGTGAATTCTGATTATCCTGTATGAGCATCTGTGAGTGGTTTATATCTTGCTTGATTTCAAtattggattttttaaaaacaaatatacaaatacacacatttcagTCGTGTTGCGCTTTATGTCTATGTGTGACAGGCTGTGACACAGATCTCTATTCTCTAAAGTTTGTTTTGCAAAGACAGTCTGAATTAACATTATCTCATCCTTTGACAAACATTGATTCTGTTTGTCTTGGCTGCTCTCCGAGTCAGAAAATCTGGATGTGACGACTGCCTTTGATACCCACAGTATGGCGGTAGAGCTTGGTGATGAAAACTGAATGAAAGATTAGTCAGTGTAATGCAAATAGGACAAGTGTCCTGACACGATTcgtattttgttttgcaaatatgCTAAAGCTACTTTCTCCCAACAAGTTCTGAACTTCACCCCACACTACGCAAGTAATTTAGTGCGCTGCTTCAGTTTTGTCTCAGTTCATATAATTTGACAAGTTTGTTTGTGCAGACAGAGCAGTTATAAGTTAGTTTCAAATTTGGACAAACACTGTTGCCaaacatttcagaatttatTGGAATCCAGTGCTTTTCATGTCGCCAGCAGACAAGGGCtctttttgttgtaaatgttttgaatgatCATCATACTTTAGTCGGTTGTAAATAATGTTGCTACAGCATTCGGTTtgtttgttaataatttaaagcaTACATTCAGTTTCTATTTAAAGCTGCTGTaagcagtttatttaaaaaaaaacaacagctcaaaaatcaaaaactggTACCACTGAAATATGTTTTGAGATCATTGCACTCTCTCTATGAGAGCACCTGTATTTAGAAAACAGTAAAGCagagaaaaataatgacagcCCATGCGTGTTAGCCAATCAGAACCTGGTGGCATACCTTTGGTGCGGGACTACTTGTTTCCAATTATTGGACAAATTTTCAGTGGTTTAGAAAAATGGCTTACAGCAGCTTTAAGGTTTTCAAAGGTCACCACGAGATGCACAACTGTACATTTTGGTACTACTAAATAAACAATTCTCAGAAACCTG
>XM_043242290.1
catttgacaacGCTAGTTTGCGATATGAGAGAACTATGGCTTCCTCCTTGATTAAGTGGTTAAGAggattatatgtttttttcttaacgTGTCTCTTGTCCGTCTTTGGTTTTTTGAATTTAGaagaattaaatgaaatgaaatatggaaTACAGATTCTGCCCGATCCTGTTATTATGGGACAGATGGAAGATGTGATGTTGGTCTCTAACAAATACAAGCAGTTGTATGAGTGTCGTTTGCCAGCTCAAGCGGTGCGTTTTCATCAGGACCCAGTGTCAGAACCTGATGTTCAAAGCTACAGTGGCCCCGGAGTCCCTGATCTCCTCAAGCCCATGCAGACTGCACCATGCCTGGTTAAGaCCAAAGACTGGTGGACTTATGAGTTCTGCTATGGCCAGCACATCAGGCAGTACCACTTAGAAGATTCTGAGATAAAGGGAGATGTGCTTTTCTTGGGATATTATGATTCAGAGTTTGACTGGACCAATGAAACTGCCAAGgCATCTAAGCAACATAAGCTTAAGAGGTATCATAGTCAGTCATATGTCAATGGCTCTAAATGTGACTTAAATGGGAATCCCAGAGAGACAGAAGTCAGAtttgttTGTGAGGAGGGCTCTAGTGACTATATCGCAAGGGTAGATGAACCTCAGTCCTGCCGCTACGTCTTAACAGTACACACCTCTCGTACATGCCAGCATCCCCTCCTGCGCCCACCTTCCACTGCCAAGCCACAAGGCATTGTGTGCCAACCTGCTCTCAGCGCCCAGCAGTATATGGACTATGTCAAGGCTCAAGTCTCTGACACTAAACGTAAAGTGGAGCAGATCTCGGAGGAACTCAAGAACCTGGATGAAATTCTGTCCAAGGATGACAAGAACAAAGGATTGCagaaagacaaaacagaagAGAACCCTGTAGTCGATTCAGATGATCCTCCACTTTCAGAGTCAGAAACAAAAGAAGGTGAAGTAGCTGAGGTGGGTTCAGTGAGTGAAGAACCTGAGGACAAGGACTTCTGGGACGGAGTTACCAAACCAGCAAGCACAGAGTCAAGCACACCTGATTTAGAGAACCCTCAGGAGCCTCAGGACAACCAGTTACATGAAAATGACAtATTCGGAGaggaaaaatttaattttaaaatcatctcAGACCCTGCAGACCTCATGAAATTTGTACAACATCTCAAAGAGAGCAACCAAAAAAACAGGAAAGCCGAACAGGAAAAAGAGAGCCAGCAGTCGTCTCAAAAGGGAGAGAagcaggaagaggaggagaaaagaaaggtggaggaagaggaaggggaTGAGGATGAAAGATTGCTGCAAGAGTTTGAGGATGAGATGGCAGATCTGACCGTTCCCTCCTCCAAGATAGAGGAGATAAAAGAAGAGATGCAGAAAGAGTTTGATAACATCATAGAGGAAGCTCAGCAGGAGTTAGAGAATGAAGGTCTTAAGGGCGAGTTTGATCGCACTCAGGCTACACAAACTCTAGAGAACACACTGGGGAAACTTCTGGACCGTCTTGAAGACAAGACCGGACATGAGAGtgaaactgaaacagaaaaaaatacagagatgCATAAAAACACTCACTCACAGCATAAGACAGAGGAAGGCTCTTCTTCTGCCAGCCCAAACCTGGTTCCCAAAACACCAGGAAAGATTGAGGTGAAGATTTTAACCCGTAAAACAGCAGAGGAAGCAGGAGATCAGTGGCTCACTGAAGAGGATACAAAATCATTTAGAGAGCTTCTCATCAACCTTCTGACGGGAGGTACGGAAGAAGTGTATAAAGAGCAGAAAAGACAGCAAGAGTTGGAGAATAACTACAAATTTGTCTGGGGAGAAAAACAGGAAGACAGCCAGTCCACAGGAAACAGTGATTCTGATGAAGCAGACTTTTGAgccttttcctcttttctcaAGCACTATTAAACCTGAAGAAGGGCAGCCAGCGTTCTCTGAACTAGAAACTGTCAATCAAACTGCTCTCTCAGACTGTTTAAGTCATGTGAGCCCTGTGAGGGGGTCAGTCCACTGCCGTGAATTCTGATTATCCTGTATGAGCATCTGTGAGTGGTTTATATCTTGCTTGATTTCAAtattggattttttaaaaacaaatatacaaatacacacatttcagTCGTGTTGCGCTTTATGTCTATGTGTGACAGGCTGTGACACAGATCTCTATTCTCTAAAGTTTGTTTTGCAAAGACAGTCTGAATTAACATTATCTCATCCTTTGACAAACATTGATTCTGTTTGTCTTGGCTGCTCTCCGAGTCAGAAAATCTGGATGTGACGACTGCCTTTGATACCCACAGTATGGCGGTAGAGCTTGGTGATGAAAACTGAATGAAAGATTAGTCAGTGTAATGCAAATAGGACAAGTGTCCTGACACGATTcgtattttgttttgcaaatatgCTAAAGCTACTTTCTCCCAACAAGTTCTGAACTTCACCCCACACTACGCAAGTAATTTAGTGCGCTGCTTCAGTTTTGTCTCAGTTCATATAATTTGACAAGTTTGTTTGTGCAGACAGAGCAGTTATAAGTTAGTTTCAAATTTGGACAAACACTGTTGCCaaacatttcagaatttatTGGAATCCAGTGCTTTTCATGTCGCCAGCAGACAAGGGCtctttttgttgtaaatgttttgaatgatCATCATACTTTAGTCGGTTGTAAATAATGTTGCTACAGCATTCGGTTtgtttgttaataatttaaagcaTACATTCAGTTTCTATTTAAAGCTGCTGTaagcagtttatttaaaaaaaaacaacagctcaaaaatcaaaaactggTACCACTGAAATATGTTTTGAGATCATTGCACTCTCTCTATGAGAGCACCTGTATTTAGAAAACAGTAAAGCagagaaaaataatgacagcCCATGCGTGTTAGCCAATCAGAACCTGGTGGCATACCTTTGGTGCGGGACTACTTGTTTCCAATTATTGGACAAATTTTCAGTGGTTTAGAAAAATGGCTTACAGCAGCTTTAAGGTTTTCAAAGGTCACCACGAGATGCACAACTGTACATTTTGGTACTACTAAATAAACAATTCTCAGAAACCTG

Function

symbol description
os9 Predicted to be involved in retrograde protein transport, ER to cytosol and ubiquitin-dependent ERAD pathway. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum lumen. Orthologous to human OS9 (OS9 endoplasmic reticulum lectin).

NR:

description
protein OS-9-like isoform X1

GO: NA

KEGG:

id description
K10088 OS9; protein OS-9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242289.1 True 3326 mRNA 0.43 15 19251533 19260149
XM_043242290.1 False 3116 mRNA 0.42 14 19251533 19260149

Neighbor

gene id symbol gene type direction distance location
c1galt1b c1galt1b,LOC107673577,LOC107711070,LOC107585137,LOC107733588,LOC107667385,LOC107579179 coding downstream 843 19244648 ~ 19250690 (-)
apof LOC107711072,LOC107585209,LOC107673462 coding downstream 14716 19233271 ~ 19236817 (-)
stat2 LOC107673542,LOC107711071,LOC107585138,LOC107667368,LOC107733592,LOC107582712 coding downstream 18734 19221293 ~ 19232799 (-)
LOC122347293 LOC107711003,LOC107667371,LOC107585181,LOC107673453,LOC107711002 coding downstream 61024 19188495 ~ 19190509 (-)
eif4bb eif4bb,LOC107673526,LOC107711078,LOC107585139,LOC107582715,LOC107733597 coding downstream 64106 19175866 ~ 19187427 (-)
arhgef25b LOC107673520,LOC107711023,LOC107585132,LOC107582829,LOC107733583 coding upstream 13968 19274117 ~ 19286211 (-)
krt4 krt4,LOC107711067,LOC107667388,LOC107585134,LOC107673521,LOC107582705 coding upstream 37742 19297891 ~ 19302750 (-)
zgc:158846 zgc:158846,LOC107711021,LOC107585206 coding upstream 57428 19317577 ~ 19321542 (-)
scn8ab scn8ab,LOC107667357,LOC107673511,LOC107582701,LOC107585129 coding upstream 81944 19342093 ~ 19390664 (-)
atf1 atf1,LOC107740571,LOC107582700,LOC107667378,LOC107673536,LOC107585126,LOC108271751 coding upstream 138707 19398856 ~ 19404013 (-)
G46509 NA non-coding downstream 8722 19212639 ~ 19242811 (-)
LOC122347223 NA non-coding downstream 99839 19149746 ~ 19151694 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding downstream 202697 19044628 ~ 19048836 (-)
G46476 NA non-coding downstream 207664 19043616 ~ 19043869 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding downstream 279163 18970170 ~ 18972370 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding upstream 133328 19393477 ~ 19397730 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding upstream 346213 19606362 ~ 19607056 (-)
G46658 NA non-coding upstream 531493 19791642 ~ 19792328 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding upstream 541094 19801243 ~ 19802266 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding upstream 573921 19834070 ~ 19838047 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 101802 19115061 ~ 19149731 (-)
G46478 NA other downstream 195402 19055146 ~ 19056131 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 534045 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 543937 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 606399 18644306 ~ 18645134 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 293168 19553317 ~ 19555942 (-)
tomm6 NA other upstream 581330 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 582895 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 639523 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 738483 19998632 ~ 20000638 (-)

Expression


Co-expression Network