slc4a8 (LOC107711038,LOC107673578,LOC107667363,LOC107585109)


Basic Information

Item Value
gene id slc4a8
gene name LOC107711038,LOC107673578,LOC107667363,LOC107585109
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19748843 ~ 19770878 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242309.1
GTACCTCTTTCCAAGTCCTGGAGAGCGCTCGCCTAACAACAGCGTTAAAGTATAGACAGGGCGAATGCGCGTGCAGATCTCAACGTTAGTTTAAGAAGGGATCAAGAGCACTTCATGTCTAACCGCATATGCATCAAGTGATCTGGAGTTTCTCAACAGGAACTGCGAATCTGATCCGCGTCGCTATTCATACTGTGGAAGCCGCAATCGACGCACCTTTGACTCTGCTTTAAAACGGAGTTAACCATGCCTGCCGAAAACAGCGACCAGGAGAGCATGCTGAGCTATCAGAGGCCTGATGAGGAAGCTGTGGTGGACCATGGTGGCACCAGCTCAGTTCTGAATATCCATTATGAGAAAGAAGAGCTAGAGGgtcACAGGACTCTGTTTGTGGGTGTGCGGATGCCCATGGGCAGACAGTCTCATCGTCATCACCGGCCGCACAGCTCCAAACACCGCAGGAGAGCCGAGAGGATGCGGGCTGGAAGTGTGGCTCAAGAAGAAATGAACACGGAAAGTACCGCAACCTCACACGATACTCCATCCCAGAGGGTTCAGTTTATTCTGGGCACTGAAGAGGATGAGGAGCACGCAGCACATGACCTCTTCACAGAACTTGATGAAATCTGTGTTAAAGACGGCAAAGACGCAGAGTGGAAGGAAACTGCGAGGTGGTTAAAGTTTGAGGAGGATGTGGAAGATGGAGGGGAAAGGTGGAGTAAGCCGTACGTAGCTACACTCTCTCTCCATAGTCTTTTTGAGCTACGGAGCTGTATCATTAATGGAACAGTCCTGTTGGACATAAAGGCCAGCTGCATTGAGGAAATCGCAGATATGGTGCTTGACCATCAGGAGGCGGCTCATGAACTGGATGACAGTGTGAGGATGAAGGTTCGAGAGGCACTTCTGAAGAGGCATCACCACCAGAGTGACAAGAAGAGGAACAACCTGCTGCCCATGGTCAAGTCCCTTACCGACTCAGGCAGGAGACAGAGTGAACCTCATCATATGGACAAAGCGGGTCCTGCCACTTCTCCCCAGCCTCCACCTACAAACCCAGATGTAAAGATCGGAGCAGCCGAAAATGGCCAAATGGATCTCAGCAAGGTGGACACACATTTCATGAAGAAGATCCCAACTGGAGCAGAGGCTTCCAATGTGCTGGTTGGGGAGCTGGACTTTTTAGAGAGATCCATTGTTGCGTTTGTTCGTCTTTCTCCTGCTGTACTGCTTACAGGGCTCACTGAAGTTCCCATTCCCACTAGatttgtgttcattttgctTGGCCCTGATGGAAAAGCCCAACAGTACCATGAGATCGGTCGCTCCATGGCCACCATCATGACAGATGAGattttccaTGATGTTGCATACAAGGCCAAAGACAGAAGTGATTTGTTGGCTGGGATAGATGAGTTTCTGGATCAGGTGACAGTTTTGCCTCCAGGGGAATGGGACCCTTCTATACGCATAGAACCACCTAAAAGTGTCCCATCACAGgagaaaagaaagatgccaGGTGTTCCGAACGGGACAGTTGCTCCCATTGAGGAAGAGCAGCATGGAGAACATCATGGACCAGAACTGCAGAGAACTGGAAGGCTGTTTGGAGGACTGATTCTGGATGTAAAAAGAAAAGCTCCATTTTATTTGGGTGATTTCAAAGACGGTCTGAGTTTGCAGTGTGTAgcttcttttctgtttctgtacTGTGCCTGTATGTCACCTGTTATCACGTTCGGAGGACTTCTGGGAGAGGCTACAGAAGGACGCATAagtgcgATTGAGTCTCTTTTAGGAGCGTCTATGACTGGAGTAGCATACTCTCTGTTCGCTGGACAGCCTCTAACTATACTGGGCAGCACTGGACCTGTTCTTGTGTTTGAAAAAATTCTCTTCAAGTTCTGCCAAGACTACGATCTCTCATACCTGTCCCTGCGCACTTGTATCGGCCTGTGGACGGCTTTCCTGTGTCTAATTCTTGTTGCAACGGATGCTAGCTCCTTGGTGTGTTACATCACACGTTTCACAGAGGAAGCGTTTGCTGCGCTCATATGTCTTATATTCATTTACGAAGCACTAGAGAAACTTTTCCATCTGGGAGAACTGTACCCCATCAACAGACACGGCGATCTAGACAAACTAACACTGGCCTACTGTAGGTGTGCAGAGCCTGATAACCCCAGTAATAAAACACTAGAACTGTGGAATCAAAGGAACATCACAGCCTCTGCAGTGCCATGGAACAACCTCACTGTATCGgAGTGTTTAGATCACCAGGGCCAGTTTATTGGATCGTCATGTGGACACCATGGTCCCTACACTCCTGATGTGCTCTTCTGGTCGGCCATCTTGTTTTTTGGTACCTTTTTTCTGTCTACCTTCCTCAAACAGTTCAAGACTAGCAGATACTTCCCAACTCGGgTCCGGTCAATGATCAGTGATTTTGCTGTGTTCCTCACCATTGTTCTCATGGTACTGACTGATTATTTAATTGGAGTTCCATCCCAAAAGTTGCAAGTTCCAAGCAACTTCAAGCCCACCCGTGATGACCGTGGTTGGATTATGAACCCTATTGGGCGAAACCCATGGTGGACTGTGCCGACTGCCTTAATACCAGCTCTTCTCTGCACCATCCTCATCTTCATGGACCAGCAGATCACTGCTGTCATAATTAACCGCAAGGAACACAAACTGCTaAAAGGCTGCGGGTACCATTTGGATCTTCTGATGGTTGGAGTGATGCTGGCTGTATGTTCCATAATGGGGTTACCCTGGTTTGTTGCAGCAACTGTCCTGTCAATTACACATGTCAATAGCCTGAAGCTAGAGTCTGAAAGCTCCGCCCCTGGAGAGCAACCTCGATTTCTGGGCATTAGAGAGCAGAGGCTGACTGGTCTGGTCATTTTTCTACTCATGGGCTTATCTGTGTTCATGACTGGAGCATTACAGTTCATTCCCATGCCAGTTCTCTATGGTGTATTTCTTTATATGGGTGTCTCATCTCTGAAAGGCATTCAGTTCTTTGACCGTCTGAAGTTGTTTGGCATGCCAGCGAAGCACCAACCGGACTTTATTTATCTACGTCATGTTCCTCTGAGGAAGGTTCACCTGTTCACTCTGACCCAACTTACCTGCCTCGTGCTGCTCTGGGTCATCAAAACTTCCCCTGCCGCAATCGTCTTCCCTATGATGGTGCTGGCATTAGTGTTCATCCGTAAGCTGCTGGACTTCTGTTTTTCCAAACGGGAGCTTAGTTATCTTGATGATCTGATGCCTgagaacaagaagaagaagctggacGATGATTCCAAGAAGGCAGAGGAGCAGGAATCTCAGGAGATGCTGGTTGATGACTCTGAGAAGTTACAAGACAAAGATACAGTGCAAATCCCAATGGAGACCAAACCTTTACATTCACCACGAACTCCTGACCCCAGGACTGATCCCTCTGATATTAACATATCTGATGAAATGTCTAAAACTACCGTTTGGAAATCCCTCAATTCCAATCACAAGGACACACaacgctcaaacacacacaaaaaggcaAGGACTCTCGCTCTTTCCATCCTTTAATGGAGGTTCCGTGAAGTAACCCCCAAGAAAGAAGAAATTACATTCTTAGCATCGGTTGTTTGAAATCTGGCTGACTTGCGGAAGCAGCCATGtgctaaaaacacacagatattaGTTCACTCCTTTCCactgtttctcacacacatgcgttcacacacatgtgtgtttctgtatagCTGTGTGAGATATATtggtgtgtcagtgtgtgtgtatgaatatgTGCAACATATTCTCCTACCAAATCCaggttatttttaatgtttagttgAGTTTTAGCAGACATGGGCGTCTCTGTGCTGTGCGGTAgtgtacatgtatttttttggtaattGTCTCATTTATAGAATAATACGGTCGTTTAAATGTTCTCATTTGAACTATATACTTGCTGTAGATATTACTGTATACGTGTGGTTTGTTCATCGTCGAAAATCCACAATAAGTGCGTGTGTTTAAGCCAAATGGCTGGTCAAAATAATAACCTCAGTTTGATCTATTTTTGTGCCAGTATAAATAGCCATCGGTTACATTAGACCAACATGGCCATGAACCAAATCGGTCCTTATCCAGTAGACGGActtgtcttatttttattgcgTGTGTTGTATTGAAACTTGTTAATATTGAGCAATAAAAGGCTATATATGGTTAGGTCACCAGGGACACTGATGGATAAGTATGAATTCGTCGTGATTGTTTTTAACAAGCATTCTTAAGTCACCCCTCTCTTACTTGTAAGAACAGACTGGTCAAAATCTCCATTTAGACGCACCATCCAAATTTATGTTACAAGGGTTGAGGGTAAACTGGACTGTTCGGGTTTTCATTTGAAGACCTTTTCCAGTCACGAGTCCCAGTAATAAGCCATCTCCTCTAGACTACCTCCCCACACTTTTAAAACTCCCACAGTAGTTTCTGCACTGAAAGAGGTAAAAATATGATTGTGTTTTTAACCTCAGtgaaataacactttatttacagtTGCACTTTGTGTagatatatatactaatatgattttatattttaaagggaATTATTATATAGAGTATAACAGTGTGATACgattattttaagtaaagcattttcttttttatataaatgtattttaataaaatgagttGAGCAGATACAGTACGACACTGGTTGTTAATATGTATGGGTTACAGCTGTGTCTTACAGGACCAGTTgtctgtaaaatgtaatttcacttAATTAAACTGCCTTCAGATTATATGAGAATGTCAAAATTTGATTTGGAATGTCGACTCAGCTTTGGAATGTTGAGGAATGAGGAATTTTTCCCAGCTTGACATTAAGCTACTAAATTATCTATATTGTCCCCTCCATGGCTTTCTTGTTTACGGAAATGTTGTCATTGACTTGATTGTACATGTTATCTTAATGCTGGGATGTGCTCAAAGAGAATGTCTGTTTCACTCTAataaattttagattttctgaATGAGATAAA

Function

NR:

description
electroneutral sodium bicarbonate exchanger 1-like isoform X2

GO: NA

KEGG:

id description
K13859 SLC4A8; solute carrier family 4 (sodium bicarbonate cotransporter), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242309.1 True 5050 mRNA 0.44 25 19748843 19770878

Neighbor

gene id symbol gene type direction distance location
endou endou coding upstream 188506 19556852 ~ 19560337 (+)
smarcc2 smarcc2,LOC107711050,LOC107667400,LOC107748388,LOC107582794,LOC107673598 coding upstream 202969 19532334 ~ 19545874 (+)
c1ql4b c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC107748412,LOC107667333 coding upstream 217980 19520291 ~ 19530863 (+)
LOC122346461 LOC107711020,LOC107667380,LOC107740572,LOC107585130,LOC107673452,LOC107711000,LOC107580767 coding upstream 350402 19396637 ~ 19398441 (+)
LOC122346460 mettl7a,LOC107585130,LOC107711020,LOC107667380,LOC107740572,LOC107673452,LOC107711000,LOC107580767 coding upstream 353488 19393452 ~ 19395355 (+)
LOC122347196 NA coding downstream 1014 19771892 ~ 19774436 (+)
zgc:152986 LOC107585105,LOC107711036,LOC107673557 coding downstream 29788 19800666 ~ 19802004 (+)
LOC122347173 LOC107585103,LOC107748397,LOC107582678,LOC107673556 coding downstream 31808 19802686 ~ 19816030 (+)
prkcda LOC107673500,LOC107712078,LOC107721176,LOC107667398,LOC107582675 coding downstream 48959 19819837 ~ 19829702 (+)
ddi2 LOC107712079,LOC107673502,LOC107667352,LOC107721177,LOC107584413,LOC107578835 coding downstream 60261 19831139 ~ 19838046 (+)
G46608 NA non-coding upstream 44804 19697173 ~ 19704039 (+)
G46569 ip6k2b,LOC108272042,LOC107667389,LOC107748392,LOC103024783,LOC107673575,LOC107585112 non-coding upstream 110875 19634736 ~ 19637968 (+)
G46579 NA non-coding upstream 139490 19608549 ~ 19609353 (+)
G46577 NA non-coding upstream 145241 19603089 ~ 19603602 (+)
G46364 tsfm,LOC107711018,LOC107585120 non-coding upstream 194674 19553319 ~ 19554169 (+)
G46623 NA non-coding downstream 3828 19774706 ~ 19775152 (+)
G46631 NA non-coding downstream 16096 19786974 ~ 19787202 (+)
G46632 LOC107673616,LOC107585107,LOC107711037 non-coding downstream 17057 19787935 ~ 19788850 (+)
G46633 NA non-coding downstream 18820 19789698 ~ 19790339 (+)
G46640 NA non-coding downstream 28134 19799012 ~ 19799512 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other upstream 154835 19566011 ~ 19594008 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other upstream 401214 19262584 ~ 19347629 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other upstream 1131885 18577178 ~ 18616958 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other upstream 1582601 18156655 ~ 18166242 (+)
G46022 NA other upstream 1752126 17995191 ~ 17996717 (+)
ghrl LOC107585199,LOC107711011,LOC107673481 other downstream 13299 19784177 ~ 19786297 (+)
LOC122347202 uqcc2,cf125,LOC107580205,LOC108440614,LOC107667355,LOC106565356 other downstream 72169 19843047 ~ 19846548 (+)
slc6a11a slc6a11a,LOC108440580,LOC107673588 other downstream 95681 19866559 ~ 19873535 (+)
G46742 NA other downstream 316213 20087091 ~ 20095641 (+)
LOC122346811 rad18,LOC107673612,LOC107657944,LOC107567093,LOC107584494 other downstream 861092 20631970 ~ 20661207 (+)

Expression


Co-expression Network