kbtbd12 (kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198)


Basic Information

Item Value
gene id kbtbd12
gene name kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19918053 ~ 19921278 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242327.1
CTGGAATGGGCATGGAAGGTTGAGCATGCTCTCTCCCAGTGTTTACTGTTAGGCACAAGGCAGCCAGCGTGTTTGTGTCGAGTTTGGGTAATGGACGAATTGTTGCCTGAAGGCAGACACCACGGGAAGCCAGAGATCTGATACAACATTTGAAGGACCTCCAGGATGTATTTAGGTTAATAGTAACActagttttaaaaagaaaacaaaacaaaatggattTGAGAGCCAAGCACGGTTTGACGCTGTTAGAACAGCTAAATCGAATGCGGGATGCTGAGCAGTTAACAGATGTGGTTCTAGTCGCTGAAGGTGTTAGCTTCCCATGCCACCGTGCGGTGCTTTCTGCCTTCAGTCCCTACTTCCGTGTAATGTTCACCTGTGGCCTGCGAGAGTGTACCAACCGTCAGGTGGTGTTAAGAGACATGCCAGCCCCAAGCCTAGCCCTTCTGCTGGAATATATGTACAGCTCCAATCTTCCACTCACTGCAGCCAATGTGCAGGGAATCTCTGTTGCCGCATTTCTTCTACAGATGGATGATGTTTTCAGTCGTTGTCATATCTACATGATTGACAACATGGATGCTTCCAATTGCCTgggcatttattattatgctcGTGATCTAGGGGCAGAAGAGTTGGCCGACCAGGCTCAGCACTATCTACGACAGCACTTCACTGAAGTGTGCCTTGGAGAGGAAGTGCTGGAGTTGGAGGCACACCAGTTAGGGGCTGTATTGGGCTCAGATGATCTCAATATTTCACGGGAAGAGAGCATTTTGGATGTGGTGATGCGCTGGGTGAATTACCGTCCAGGGGCTATAGGCTCAGAGGAAGAGAACCGGGCCAGGCACCTTCCAGAGCTCTTGAAGAAGGTACGTCTTCCACTGGTGGGTGCAGATTACTTGAAGGGGACTTTAAAACGGAACACGGCTCTTCTAGCTGATGCCGAATGTCTTCAGATAATGGAGGAGGCAGTTGAAGCAGCGAGATTGGATTCAGATGCTCCACCTCGTCGACTGAAGCTGCGTTATGGCATGGAGACCACAGACCTCCTGCTCTGCATTGGTAATGATGGAGGAGGCATTCGCTCACGTTACGGAAGCTACACAGAGCGTAGCTTTTGTTATGCTCCCAAAACAGGACGGACACTTTTCATCACCTCTCCGAGATATGGTGATGCACTTGGATATGTCTTTGCTGGGGTAGTGACTGAGAGGAATGACATTATTGTTGCAGGAGAGCTGGGAGCAAGAAGGATGtcaagacagaaagaaagaaatgtcgAGATTTTCATGTACAACAAGGAAGCCCAAGGATCTTGGAAACACTTGAGCTCAGCAGAGTATCGTGATTCTTATGCTTTAGGCTCTTTGGGAGAAAACCTCTACCTGATTGGTGGTCAAATGAAGCAAAACCAGTTCCTCATCACCAACAGTGTTGAGCGTTGGTGTCTACAGGGTGGACCATGGCGTAGCGCTGCCCCTCTGCCCATGCCACTGGCCTATCACAGCATAGTTCGGATGAAGGGCCGGCTGTATGTACTTGGAGGACGGACTCCACAGTCGTACCGCACAGATGACGAGCCTGACCGTATGAGTAATCGTCTGCTTGAATACGACCCAGAAACCAACAAGTGGAGTGAACTGAGCCctatgaaatattcaaaataccGTTGCAGTGCAGTCACACTCAATGGGGAAATCTATGTACTAGGTGGTATTGGGTGCGAAGGTGTGGATCGTGGCCAATCACGTCATTGCCTTAATGTAGTGGAGATCTACAACCCTGATGGTGATTTCTGGAGGGATGGTCCACCTTTACCATGGCCTCTCCTATCACTTCGCAGCAATGCATCAAATGCTGGGGTTGTTGATGGAAAACTTTATGTCTGCGGATACTACAAAGGAGCAgATCGTCACGATACCATTACTAAAGACATCCTGCAGTTGGATCCCTGGGAAAATGTTTGGACTGTGGTAGCAAAGCAGGCTCTGATGCACGACAGTTATGATGTGTGCTTGGTGGCAAATCTGAATCCTCGTGGACTGATGCCCCCTCCTGCTGACTTGGTAGAGGAATGACAATACTATCTATCCAACAGtgatttctcattaaaaaaaatctatgcatttttttcatt

Function

symbol description
kbtbd12 Is expressed in myotome. Orthologous to human KBTBD12 (kelch repeat and BTB domain containing 12).

NR:

description
kelch repeat and BTB domain-containing protein 12-like

GO: NA

KEGG:

id description
K21912 KBTBD12; kelch repeat and BTB domain-containing protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242327.1 True 2143 mRNA 0.48 8 19918053 19921278

Neighbor

gene id symbol gene type direction distance location
c6h1orf159 LOC107673608,LOC107712089,LOC107584440 coding downstream 4211 19910994 ~ 19913842 (-)
LOC122347195 LOC107584484,LOC107673448,LOC107712069,LOC107721173 coding downstream 9985 19905851 ~ 19908068 (-)
ppil1 ppil1,LOC107673584,LOC107667353 coding downstream 42285 19873973 ~ 19875768 (-)
crbn crbn,LOC107711034,LOC107748399 coding downstream 117484 19795103 ~ 19800569 (-)
vhl LOC107711035,LOC107673464,LOC107585106,LOC107667384,LOC107748400,LOC107582681 coding downstream 123427 19792750 ~ 19794626 (-)
p4htmb p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 coding upstream 7077 19928355 ~ 19934425 (-)
LOC122347206 wu:fd14a01,LOC107575389,LOC108443910,LOC108254796,LOC107571573,LOC107705004 coding upstream 28034 19949312 ~ 19959657 (-)
arpc4 arpc4,LOC107721188,LOC103358720,LOC107568180,LOC100696600,LOC103386159 coding upstream 39918 19961196 ~ 19964821 (-)
LOC122347402 LOC107673562,LOC107712070,LOC107584441,LOC105017189 coding upstream 44125 19965403 ~ 19966424 (-)
eefsec eefsec,LOC107584423,LOC107667374,LOC107568193 coding upstream 67641 19988919 ~ 19994672 (-)
LOC122347207 NA non-coding downstream 37465 19877312 ~ 19880588 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding downstream 80006 19834070 ~ 19838047 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding downstream 115787 19801243 ~ 19802266 (-)
G46658 NA non-coding downstream 125725 19791642 ~ 19792328 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding downstream 310997 19606362 ~ 19607056 (-)
G46803 NA non-coding upstream 46968 19968246 ~ 19968460 (-)
G46816 fkbp5,LOC107584436,LOC107712109,LOC107673486,LOC107721196,LOC107667344 non-coding upstream 133588 20054866 ~ 20115259 (-)
G46836 NA non-coding upstream 206670 20127948 ~ 20129839 (-)
G46838 NA non-coding upstream 228269 20149547 ~ 20152787 (-)
G46842 NA non-coding upstream 252260 20173538 ~ 20174291 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other downstream 70621 19843044 ~ 19847432 (-)
tomm6 NA other downstream 75059 19841479 ~ 19842994 (-)
tsfm tsfm,LOC107711018,LOC107585120 other downstream 362111 19553317 ~ 19555942 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 768322 19115061 ~ 19149731 (-)
G46478 NA other downstream 861922 19055146 ~ 19056131 (-)
mustn1a mustn1a other upstream 77354 19998632 ~ 20000638 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other upstream 174746 20096024 ~ 20102459 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other upstream 240162 20161440 ~ 20166279 (-)
G46926 NA other upstream 607901 20529179 ~ 20531834 (-)
mdfic2 LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432 other upstream 1427341 21348619 ~ 21355381 (-)

Expression


Co-expression Network