LOC122347196


Basic Information

Item Value
gene id LOC122347196
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19771892 ~ 19774436 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242342.1
GACCACCACAGTATAAAGATGGCATATACAAATATGTGGATATTTTTAAACATCCTGACTTCTCTGCACTACCTCACGAAAGCCTGTACTCCATCATACAGCGATTCGATACAGATAACAGCTTTCTCAGGAGGGTCTGTGCTGCTGCCCTGCTCCTGTACCGACCCACAGGACAAGCCCAAAAGCGTCTTCTGGGAATCCAACAGCAAAAGAGCTTCTAAAGATCGCATTTATACCGATATATATAGTGTGTTTGAGCTGTACAGTGGCAGAATTACACTGTTTAATCAGACTTCACCTGGAAACGTCTCGCTGCTTCTGTCAGACCTGACCAAAGATGATCAGGGATCGTATGTCTGTTTGTTAGATAAAACATCCAGATTCTATAATGTCACCATCGAAGAGAGATGTGTAGATACAGCATCTTCTAAACCGAGTCTCAGCAGTGTGTGGATCTTTGTGCTGTTCATTGTAATATCAGCAGGAGGAGCCGCTGCCATTTGCTCCATTAGAGCTcacagaaaagcaaaaacagagtCTGGAGAAATAAATGGAGAAAACAATTTGGACGATTCAACATACTGTACTCTGCAGAAAAAATATGATGCTGAGGAAATGTATGGAACTATCGGGAACAGATCAAAGCAATAGTAGAATGTCAGGTTTGCTGTGAAATTTGCCTTAATAAACCCTGTTTGCAACTCAACATTAAATAACTAattgattgtttaaaaaagcatttgctaAATACACACATGTGAATGTTACGCTTCTGTTATATTGTACATTTACGCATTTATACAATTCCAGACATTCACTGAGTATTTCTGTTGACAGAACAAGAAGTCATGttgtattgcattattttttttacgttctCTTGGCGTCATTTAGGTCTATTACAATATTATCATGtccaaaattaaaaaggaaagcaCATTCCTTACGTTAGTTAATTTATGTTAGGTATTTATCTGCTTTACAAACATctgatttacaaacaaacaaaacatgattaGCCATGGTATCATTTCATACAGCAGGTTTGGTCTCTAAAAAAAAAGGCCTGCCCTCGGAGGCGTGGCGGAATAAACATTCCTAAGCATGCAGAGCATTGCGCTATAGCTTCTACTTCTCACAGTGACAAGCAGCATTTCAACTAGTTTAAAACTCACAAAATGGCAGAGGCAGCTAGATGTGTAAGTATGAATTCTTGactattcatatttatatttaacatttcgactcaaaactcaaaatggaaacatatttttgtttgaattttatttacGTTTTAATTGAAcgttgtaaataaatgaaacatcgCACAGTCACAATTTTGTCCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242342.1 True 1348 mRNA 0.37 5 19771892 19774436

Neighbor

gene id symbol gene type direction distance location
slc4a8 LOC107711038,LOC107673578,LOC107667363,LOC107585109 coding upstream 1014 19748843 ~ 19770878 (+)
endou endou coding upstream 211555 19556852 ~ 19560337 (+)
smarcc2 smarcc2,LOC107711050,LOC107667400,LOC107748388,LOC107582794,LOC107673598 coding upstream 226018 19532334 ~ 19545874 (+)
c1ql4b c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC107748412,LOC107667333 coding upstream 241029 19520291 ~ 19530863 (+)
LOC122346461 LOC107711020,LOC107667380,LOC107740572,LOC107585130,LOC107673452,LOC107711000,LOC107580767 coding upstream 373451 19396637 ~ 19398441 (+)
zgc:152986 LOC107585105,LOC107711036,LOC107673557 coding downstream 26230 19800666 ~ 19802004 (+)
LOC122347173 LOC107585103,LOC107748397,LOC107582678,LOC107673556 coding downstream 28250 19802686 ~ 19816030 (+)
prkcda LOC107673500,LOC107712078,LOC107721176,LOC107667398,LOC107582675 coding downstream 45401 19819837 ~ 19829702 (+)
ddi2 LOC107712079,LOC107673502,LOC107667352,LOC107721177,LOC107584413,LOC107578835 coding downstream 56703 19831139 ~ 19838046 (+)
si:ch73-15b2.5 LOC107673501,LOC107712080,LOC107584503 coding downstream 64069 19838505 ~ 19842296 (+)
G46608 NA non-coding upstream 67853 19697173 ~ 19704039 (+)
G46569 ip6k2b,LOC108272042,LOC107667389,LOC107748392,LOC103024783,LOC107673575,LOC107585112 non-coding upstream 133924 19634736 ~ 19637968 (+)
G46579 NA non-coding upstream 162539 19608549 ~ 19609353 (+)
G46577 NA non-coding upstream 168290 19603089 ~ 19603602 (+)
G46364 tsfm,LOC107711018,LOC107585120 non-coding upstream 217723 19553319 ~ 19554169 (+)
G46623 NA non-coding downstream 270 19774706 ~ 19775152 (+)
G46631 NA non-coding downstream 12538 19786974 ~ 19787202 (+)
G46632 LOC107673616,LOC107585107,LOC107711037 non-coding downstream 13499 19787935 ~ 19788850 (+)
G46633 NA non-coding downstream 15262 19789698 ~ 19790339 (+)
G46640 NA non-coding downstream 24576 19799012 ~ 19799512 (+)
itpr1a itpr1a,LOC107748403,LOC107711046,LOC107673508,LOC107585177 other upstream 177884 19566011 ~ 19594008 (+)
si:dkey-195m11.8 si:dkey-195m11.8,LOC107585129,LOC107673511,LOC107711061,LOC107667357,LOC107733585,LOC107582701,LOC107711063,LOC107673480,LOC107733603,LOC107582828,LOC107667335,LOC107579851 other upstream 424263 19262584 ~ 19347629 (+)
atp10a atp10a,LOC107673579,LOC107711085,LOC107733604,LOC107685287,LOC107585184 other upstream 1154934 18577178 ~ 18616958 (+)
tubgcp5 tubgcp5,LOC107585157,LOC107673606,LOC107582726,LOC107753407,LOC107685296 other upstream 1605650 18156655 ~ 18166242 (+)
G46022 NA other upstream 1775175 17995191 ~ 17996717 (+)
ghrl LOC107585199,LOC107711011,LOC107673481 other downstream 9741 19784177 ~ 19786297 (+)
LOC122347202 uqcc2,cf125,LOC107580205,LOC108440614,LOC107667355,LOC106565356 other downstream 68611 19843047 ~ 19846548 (+)
slc6a11a slc6a11a,LOC108440580,LOC107673588 other downstream 92123 19866559 ~ 19873535 (+)
G46742 NA other downstream 312655 20087091 ~ 20095641 (+)
LOC122346811 rad18,LOC107673612,LOC107657944,LOC107567093,LOC107584494 other downstream 857534 20631970 ~ 20661207 (+)

Expression


Co-expression Network