ppil1 (ppil1,LOC107673584,LOC107667353)


Basic Information

Item Value
gene id ppil1
gene name ppil1,LOC107673584,LOC107667353
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19873973 ~ 19875768 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242350.1
TCATGGCCTTGACGGTGTGCAATAACGAATAAACCGAACTGGGCAACTACTTCCGTACCACGCTTTGcgacatcatttttttttaaattatattttctaacaAACCGTATTTGTTGAATAACAGACATGGCTGGAATTCCGCCGGACTCATGGCAGCCCCCCACAGTATCGCTGGACACAACGATGGGCACTATCGTTCTAGAACTGTACTGGAATCATGCGCCAAAAACCTGCAAGAATTTCGCAGAACTGGGCAGAAGAGGatattacaacaacaacaagttcCACCGCATTATCAAAGACTTCATGGTTCAAGGAGGCGATCCTACGGGGACAGGTCGTGGTGGTGCCTCTATATATGGCAAGCAGTTTGAAGATGAATTGCATCCAGAGTTGAAATTTACAGgTGCTGGAATTCTCGCAATGGCCAATGCAGGGCCAGATACAAACGGAAGCCAGTTCTTCCTCTCGTTGGCTCCCACACAGTGGCTGGATGGGAAACACACTATATTTGGACGGGTCTGCCAGGGCATTGGGGTTCTTAATCGTATTGGCATGGTTGAGACCAACAGTCAGGACCGCCCTATGGATGACATTAAAATTCTCAGAGTCAATCTACCTAACTAAGACATCTGCTTGCATAATgtttcatgctttatttttgtacagtccttttattacattaaaccttcaaagttttcataaaa

Function

symbol description
ppil1 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein peptidyl-prolyl isomerization. Predicted to act upstream of or within protein folding. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia. Orthologous to human PPIL1 (peptidylprolyl isomerase like 1).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase-like 1

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242350.1 True 707 mRNA 0.44 4 19873973 19875768

Neighbor

gene id symbol gene type direction distance location
crbn crbn,LOC107711034,LOC107748399 coding downstream 73404 19795103 ~ 19800569 (-)
vhl LOC107711035,LOC107673464,LOC107585106,LOC107667384,LOC107748400,LOC107582681 coding downstream 79347 19792750 ~ 19794626 (-)
tatdn2 LOC107673616,LOC107585107,LOC107711037 coding downstream 82523 19786424 ~ 19791450 (-)
ccdc174 ccdc174,LOC107673461,LOC107711012,LOC107585200,LOC107667317,LOC107582683,LOC107748410 coding downstream 89367 19780907 ~ 19784606 (-)
si:dkey-28n18.9 LOC107711013,LOC107585201,LOC107673478,LOC107582684,LOC107748409,LOC107667326 coding downstream 93218 19776312 ~ 19780755 (-)
LOC122347195 LOC107584484,LOC107673448,LOC107712069,LOC107721173 coding upstream 30083 19905851 ~ 19908068 (-)
c6h1orf159 LOC107673608,LOC107712089,LOC107584440 coding upstream 35226 19910994 ~ 19913842 (-)
kbtbd12 kbtbd12,LOC107673613,LOC107712091,LOC107584421,LOC107721181,LOC107667403,LOC107568198 coding upstream 42285 19918053 ~ 19921278 (-)
p4htmb p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 coding upstream 52587 19928355 ~ 19934425 (-)
LOC122347206 wu:fd14a01,LOC107575389,LOC108443910,LOC108254796,LOC107571573,LOC107705004 coding upstream 73544 19949312 ~ 19959657 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding downstream 35926 19834070 ~ 19838047 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding downstream 71707 19801243 ~ 19802266 (-)
G46658 NA non-coding downstream 81645 19791642 ~ 19792328 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding downstream 266917 19606362 ~ 19607056 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding downstream 476243 19393477 ~ 19397730 (-)
LOC122347207 NA non-coding upstream 1544 19877312 ~ 19880588 (-)
G46803 NA non-coding upstream 92478 19968246 ~ 19968460 (-)
G46816 fkbp5,LOC107584436,LOC107712109,LOC107673486,LOC107721196,LOC107667344 non-coding upstream 179098 20054866 ~ 20115259 (-)
G46836 NA non-coding upstream 252180 20127948 ~ 20129839 (-)
G46838 NA non-coding upstream 273779 20149547 ~ 20152787 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other downstream 26541 19843044 ~ 19847432 (-)
tomm6 NA other downstream 30979 19841479 ~ 19842994 (-)
tsfm tsfm,LOC107711018,LOC107585120 other downstream 318031 19553317 ~ 19555942 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 724242 19115061 ~ 19149731 (-)
G46478 NA other downstream 817842 19055146 ~ 19056131 (-)
LOC122347177 LOC107584418 other upstream 23904 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 122864 19998632 ~ 20000638 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other upstream 220256 20096024 ~ 20102459 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other upstream 285672 20161440 ~ 20166279 (-)
G46926 NA other upstream 653411 20529179 ~ 20531834 (-)

Expression


Co-expression Network