tardbpb (tardbp,LOC107713527,LOC107555974,LOC107666995,LOC107680706,LOC107561006)


Basic Information

Item Value
gene id tardbpb
gene name tardbp,LOC107713527,LOC107555974,LOC107666995,LOC107680706,LOC107561006
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 22739972 ~ 22750947 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242500.1
AGGTAATGCCATCTTGATACGAAAATAGTGTCGCATGAGTTGTATAAAACGGAATGTTGTCGTCTTAATATTGAGTACATATAAAGAGATAgcattgttttactttattctaAATAGAAACTGACACAGTTGAGAGTGTCATTCTTCGTGAGAGTTGTGCTAAGTGTCTCATTCATTCTTAGCAGTCACATTTTTCGGAACGAGGAGCGCTGCTGCTGGTGGCGCTAACAAAGGAATATCTGGCTCCGAGCAGTTGTTCATTGCTCGATTGAGGAGAGATGGCTGAGATGTACATTCGCGTCGCGGAGGAGGAGAACGAGGAGCCGATGGAGATCCCGTCGGAGGACGACGGCACGGTGCTGCTGTCTACGGTGGCCGCTCAGTTTCCAGGGGCTTGTGGCCTGCGTTACCGGAGCCCGGTGTCTCAGTGCATGAGGGGAGTTCGCCTTGTGGACGGAATCCTACACGCCCCCGAGAACGGTTGGGGAAACCTGGTCTATGTGGTCAATTACCCCAAAGaaACGGTTCTGCCGGATAATAAGAGAAAGATGGATGAGATCGATGCTTCATCCGCGACGAAGATCAAGAGAGGAGATCAGAAGACTTCAGATCTGATTGTGCTGGGTCTACCGTGGAAAACTACAGAACAAGACTTAAAAGATTACTTTAGTACGTTTGGGGAAGTCATCATGGTGCAGGTCAAGCGGGACGTGAAGACGGGAAATTCAAAAGGATTTGGGTTTGTGAGATTTGCAGAGTGGGAATCTCAGGGTAAGGTGATGTCACAGCGGCACATGATTGATGGCAGGTGGTGTGACTGCAAACTACCCAACTCAAAGCAAGGACCAGATGAACCAATGAGGAGCAGGAAAGTGTTTGTGGGCCGTTGCACGGAGGACATGACCGCGGATGAGCTCCGTCAGTTCTTCATGCAGTACGGGGAGGTCACAGATGTTTTCATTCCTAAACCCTTCAGAGCGTTTGCTTTTGTCACCTTCGCAGATGACCAGGTTGCTGCCTCCCTTTGCGGTGAGGATCTGATCATCAAGGGCGTCAGTGTGCACATCTCCAATGCTGAGCCAAAACACAACAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAACGGGTTTGGAGGTCAGGGTTTTGGAGGCAACCGTAGTGCCATGGGGGGTAGCTCCAGCAGCTTGGGAAATTTCGGCAATTTCAACCTCAACCCAGCCATGATGGCTGCCGCCCAGGCGGCCCTGCAGAGCAGTTGGGGTATGATGGGAATGTTAGCGCAGCAGGGTCAGTCGGCAACATCTGGCACAAGCACAAGCGGCACAAGTTCCACTCGGGACCAGACCCAAACATACAGCTCGGGCAACAGCAACTACGGCAGCAGCTCGGCCGCTCTCGGCTGGGGCTCCGGCTCTAACTCTAGCGGTAGTGGGTTTAATTCCAGCTTTGGCTCTAGTATGGAGTCCAAGTCGTCAGGGTGGGGTATGTAAGCCGGTTTGTGTTTGAAGTGTCGGTATTTCTAGCGTGTTTGGTAAGTATTTTCCGAGAGACTTATTTCGTCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAAGCAGTCtggggacaaaaaaaaagaatgttttgtaCACTGAATGGGATTTGAGTTAGTGTTTGGAGGGAGATGTTAACCAGGATGCTACGTTAATGTACCATCTTtggtggtgttgttttttttccccctaatgTTGTATTGTCTTGATCGATGCAAACAAAGCATTTCAACTGGATTCTTATAATGCATGTTGTACAATCTGTGGATATCTGAAAACGCATGAGAATTGCATCatattttaagtacatttatcattatgtaggacaaaaaaaccaaacaaacttGCATTGGAAAGAATCTGGTTGAAACCTGAACATATTATaagttcagctttatttcagtaCAGTTTTATGGAAACCCTTTAAAACAAGCCTTCATCAAAATCTCTTCTGCAGTTGACATCTGTGGGGTTTGCCTGGGAAGAGCGCCCTCTATGGCAGCACAGTGTGGCTGAGGTCATTATGTCACCTTCCTCCCATGTCTATATGCTCTCATCGCACGGCTCGATGACACGGTGGGTGTctccttctttttttaatccactTTTTAAGACAACAAGTGCGCAGAAAGTgacgtttttttaaacaacccTTGAGTGCGATTGGTGGTGATGGCGAAGAGTGAGAAGGCTGCGAGTGAGCGAAGAAAGTGTGGAGCGCACGAACGAAAAGACTTGCGAGTGCGATGAACGAGCCGAAATGACTGCAGTGGGTGGGTTTGGTGAGCGTGTGAATGAGAGCTGCTGATACTTCCCAGCTTCCCCCTTAATTGAGCCCAAATTGATGGACATTTAATACGTGTACctcaaggattttttttttttttctttttctttttttggtctcCCTAGAATCCCCCATTTTGCTTTTCTCCTTTAGTATACTGACAATGTGCTTATATAGTTAGTGGAAtgttgtgatgatgatgatgatgcataCTTTGTCTTGCTTCTATAATCCCATCTGAATGCTGTATggtgtgtgtgctttatttcCTTGTAACTTGACCTGTAAGTGTGAACTTTGATGTGGATGACATCTTCAGTGGACACTGAGGGGGGAAAACATGAGTGATGGTGTAAGTGCGACCTGTATGTTGAGTGCTGTGGATGTCTGTGGAGTTTCCCTCTAGATAACGTCGCTCAGTGTTTTCAAAGGCATTTTATATGACTTGTCAAATGAAGGGAGTGCttcaataaaactaatttgaatAGA
>XR_006251205.1
AGGTAATGCCATCTTGATACGAAAATAGTGTCGCATGAGTTGTATAAAACGGAATGTTGTCGTCTTAATATTGAGTACATATAAAGAGATAgcattgttttactttattctaAATAGAAACTGACACAGTTGAGAGTGTCATTCTTCGTGAGAGTTGTGCTAAGTGTCTCATTCATTCTTAGCAGTCACATTTTTCGGAACGAGGAGCGCTGCTGCTGGTGGCGCTAACAAAGGAATATCTGGCTCCGAGCAGTTGTTCATTGCTCGATTGAGGAGAGATGGCTGAGATGTACATTCGCGTCGCGGAGGAGGAGAACGAGGAGCCGATGGAGATCCCGTCGGAGGACGACGGCACGGTGCTGCTGTCTACGGTGGCCGCTCAGTTTCCAGGGGCTTGTGGCCTGCGTTACCGGAGCCCGGTGTCTCAGTGCATGAGGGGAGTTCGCCTTGTGGACGGAATCCTACACGCCCCCGAGAACGGTTGGGGAAACCTGGTCTATGTGGTCAATTACCCCAAAGaaACGGTTCTGCCGGATAATAAGAGAAAGATGGATGAGATCGATGCTTCATCCGCGACGAAGATCAAGAGAGGAGATCAGAAGACTTCAGATCTGATTGTGCTGGGTCTACCGTGGAAAACTACAGAACAAGACTTAAAAGATTACTTTAGTACGTTTGGGGAAGTCATCATGGTGCAGGTCAAGCGGGACGTGAAGACGGGAAATTCAAAAGGATTTGGGTTTGTGAGATTTGCAGAGTGGGAATCTCAGGGTAAGGTGATGTCACAGCGGCACATGATTGATGGCAGGTGGTGTGACTGCAAACTACCCAACTCAAAGCAAGGACCAGATGAACCAATGAGGAGCAGGAAAGTGTTTGTGGGCCGTTGCACGGAGGACATGACCGCGGATGAGCTCCGTCAGTTCTTCATGCAGTACGGGGAGGTCACAGATGTTTTCATTCCTAAACCCTTCAGAGCGTTTGCTTTTGTCACCTTCGCAGATGACCAGGTTGCTGCCTCCCTTTGCGGTGAGGATCTGATCATCAAGGGCGTCAGTGTGCACATCTCCAATGCTGAGCCAAAACACAACAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAACGGGTTTGGAGGTCAGGGTTTTGGAGGCAACCGTAGTGCCATGGGGGGTAGCTCCAGCAGCTTGGGAAATTTCGGCAATTTCAACCTCAACCCAGCCATGATGGCTGCCGCCCAGGCGGCCCTGCAGAGCAGTTGGGGTATGATGGGAATGTTAGCGCAGCAGGGTCAGTCGGCAACATCTGGCACAAGCACAAGCGGCACAAGTTCCACTCGGGACCAGACCCAAACATACAGCTCGGGCAACAGCAACTACGGCAGCAGCTCGGCCGCTCTCGGCTGGGGCTCCGGCTCTAACTCTAGCGGTAGTGGGTTTAATTCCAGCTTTGGCTCTAGTATGGAGTCCAAGTCGTCAGGGTGGGGTATGTAAGCCGGTTTGTGTTTGAAGTGTCGGTATTTCTAGCGTGTTTGGTAAGTATTTTCCGAGAGACTTATTTCGTCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAAGCAGTCtggggacaaaaaaaaagaatgttttgtaCACTGAATGGGATTTGAGTTAGTGTTTGGAGGGAGATGTTAACCAGGATGCTACGTTAATGTACCATCTTtggtggtgttgttttttttccccctaatgTTGTATTGTCTTGATCGATGCAAACAAAGCATTTCAACTGGATTCTTATAATGCATGTTGTACAATCTGTGGATATCTGAAAACGCATGAGAATTGCATCatattttaagtacatttatcattatgtaggacaaaaaaaccaaacaaacttGCATTGGAAAGAATCTGGTTGAAACCTGAACATATTATaagttcagctttatttcagtaCAGTTTTATGGAAACCCTTTAAAACAAGCCTTCATCAAAATCTCTTCTGCAGTTGACATCTGTGGGGTTTGCCTGGGAAGAGCGCCCTCTATGGCAGCACAGTGTGGCTGAGGTCATTATGTCACCTTCCTCCCATGTCTATATGCTCTCATCGCACGGCTCGATGACACGGGGCCTGGAATATGGCTGGCCGCAAGTGAACCCCAGGCGGGAAGTCCGTTTGGGGATGGAGGAAGATGGAGGATGCTGTGGTTCTGCATCTCTGGTAACGGCCATGGACACGGTAGACTCTAGCAGAATTTGATAGATGCTTCAGGATGAGTGCTTTTCTCTGAACCTTTCAAGCCAAATGCATTTGGACCACAAAACCCAGTCTTAAGtgttaatttttcaaaattaaaattcatacgTCATCCGAAAGCTGcataaataagctttccttTGATGTACGGCTTGTTGGGACAAAATgcacaactatttgaaaatctgaaatctgagggtgcaaaaaaaatctaaatattgagaaaatcgcatTAAAGTAGTTTAAACGAAGTACTCAGCAATGCATATTCCTAAACAAAGTTTTACAGTagaaaatttactaaatatcttcatggaacatgatctttgcttaatatcctttttttgtataaagtgattgcaaaaaattacaatttagaCCGCAAAAAATTGATTGCATTTGTTCAACTTAAGACATTTCAGTCTGTATTAGACTTGATCTGGTTTCAAGAAAGCAGCTCATCGTTTTAAAATGCAGTCATATGCAGGTTAAAGTCTTGTTATTTCCAGgtccatgtttttaaaatgtatgataaaataaaaaaaactgtactgttTCATAGAGCTTCATATTCCCAGCAAAGATATGTTTTCAGAATtctttattacaataaaacataaatgaaccca
>XR_006251206.1
AGGTAATGCCATCTTGATACGAAAATAGTGTCGCATGAGTTGTATAAAACGGAATGTTGTCGTCTTAATATTGAGTACATATAAAGAGATAgcattgttttactttattctaAATAGAAACTGACACAGTTGAGAGTGTCATTCTTCGTGAGAGTTGTGCTAAGTGTCTCATTCATTCTTAGCAGTCACATTTTTCGGAACGAGGAGCGCTGCTGCTGGTGGCGCTAACAAAGGAATATCTGGCTCCGAGCAGTTGTTCATTGCTCGATTGAGGAGAGATGGCTGAGATGTACATTCGCGTCGCGGAGGAGGAGAACGAGGAGCCGATGGAGATCCCGTCGGAGGACGACGGCACGGTGCTGCTGTCTACGGTGGCCGCTCAGTTTCCAGGGGCTTGTGGCCTGCGTTACCGGAGCCCGGTGTCTCAGTGCATGAGGGGAGTTCGCCTTGTGGACGGAATCCTACACGCCCCCGAGAACGGTTGGGGAAACCTGGTCTATGTGGTCAATTACCCCAAAGaaACGGTTCTGCCGGATAATAAGAGAAAGATGGATGAGATCGATGCTTCATCCGCGACGAAGATCAAGAGAGGAGATCAGAAGACTTCAGATCTGATTGTGCTGGGTCTACCGTGGAAAACTACAGAACAAGACTTAAAAGATTACTTTAGTACGTTTGGGGAAGTCATCATGGTGCAGGTCAAGCGGGACGTGAAGACGGGAAATTCAAAAGGATTTGGGTTTGTGAGATTTGCAGAGTGGGAATCTCAGGGTAAGGTGATGTCACAGCGGCACATGATTGATGGCAGGTGGTGTGACTGCAAACTACCCAACTCAAAGCAAGGACCAGATGAACCAATGAGGAGCAGGAAAGTGTTTGTGGGCCGTTGCACGGAGGACATGACCGCGGATGAGCTCCGTCAGTTCTTCATGCAGTACGGGGAGGTCACAGATGTTTTCATTCCTAAACCCTTCAGAGCGTTTGCTTTTGTCACCTTCGCAGATGACCAGGTTGCTGCCTCCCTTTGCGGTGAGGATCTGATCATCAAGGGCGTCAGTGTGCACATCTCCAATGCTGAGCCAAAACACAACAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAACGGGTTTGGAGGTCAGGGTTTTGGAGGCAACCGTAGTGCCATGGGGGGTAGCTCCAGCAGCTTGGGAAATTTCGGCAATTTCAACCTCAACCCAGCCATGATGGCTGCCGCCCAGGCGGCCCTGCAGAGCAGTTGGGGTATGATGGGAATGTTAGCGCAGCAGGGTCAGTCGGCAACATCTGGCACAAGCACAAGCGGCACAAGTTCCACTCGGGACCAGACCCAAACATACAGCTCGGGCAACAGCAACTACGGCAGCAGCTCGGCCGCTCTCGGCTGGGGCTCCGGCTCTAACTCTAGCGGTAGTGGGTTTAATTCCAGCTTTGGCTCTAGTATGGAGTCCAAGTCGTCAGGGTGGGGTATGTAAGCCGGTTTGTGTTTGAAGTGTCGGTATTTCTAGCGTGTTTGGTAAGTATTTTCCGAGAGACTTATTTCGTCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAAGCAGTCtggggacaaaaaaaaagaatgttttgtaCACTGAATGGGATTTGAGTTAGTGTTTGGAGGGAGATGTTAACCAGGATGCTACGTTAATGTACCATCTTtggtggtgttgttttttttccccctaatgTTGTATTGTCTTGATCGATGCAAACAAAGCATTTCAACTGGATTCTTATAATGCATGTTGTACAATCTGTGGATATCTGAAAACGCATGAGAATTGCATCatattttaagtacatttatcattatgtaggacaaaaaaaccaaacaaacttGCATTGGAAAGAATCTGGTTGAAACCTGAACATATTATaagttcagctttatttcagtaCAGTTTTATGGAAACCCTTTAAAACAAGCCTTCATCAAAATCTCTTCTGCAGTTGACATCTGTGGGGTTTGCCTGGGAAGAGCGCCCTCTATGGCAGCACAGTGTGGCTGAGGTCATTATGTCACCTTCCTCCCATGTCTATATGCTCTCATCGCACGGCTCGATGACACGGGGCCTGGAATATGGCTGGCCGCAAGTGAACCCCAGGCGGGAAGTCCGTTTGGGGATGGAGGAAGATGGAGGATGCTGTGGTTCTGCATCTCTGGTAACGGCCATGGACACGAGCTACTAACCTGCTACGCTGACTAGCGTGAGACCTTTCTGCTGTTCATCTTGCTAAGTAAAAGTTGCTTTCTGCTGTATGGATCTTCTGAGGTGATGGTACAATGCTCCACCACTTCTTAGTTCATGCAGCTTTTCAGACCAGCAGGTGGCTTCCAAGAGATCAAAGGTTAAAATTGTAAGTCAGATCGTTCTTTTCATCTTCGTGGTGCTTTTCCTGACACCACAGTTTTATGTTCTGTCAAGG
>XR_006251207.1
AGGTAATGCCATCTTGATACGAAAATAGTGTCGCATGAGTTGTATAAAACGGAATGTTGTCGTCTTAATATTGAGTACATATAAAGAGATAgcattgttttactttattctaAATAGAAACTGACACAGTTGAGAGTGTCATTCTTCGTGAGAGTTGTGCTAAGTGTCTCATTCATTCTTAGCAGTCACATTTTTCGGAACGAGGAGCGCTGCTGCTGGTGGCGCTAACAAAGGAATATCTGGCTCCGAGCAGTTGTTCATTGCTCGATTGAGGAGAGATGGCTGAGATGTACATTCGCGTCGCGGAGGAGGAGAACGAGGAGCCGATGGAGATCCCGTCGGAGGACGACGGCACGGTGCTGCTGTCTACGGTGGCCGCTCAGTTTCCAGGGGCTTGTGGCCTGCGTTACCGGAGCCCGGTGTCTCAGTGCATGAGGGGAGTTCGCCTTGTGGACGGAATCCTACACGCCCCCGAGAACGGTTGGGGAAACCTGGTCTATGTGGTCAATTACCCCAAAGaaACGGTTCTGCCGGATAATAAGAGAAAGATGGATGAGATCGATGCTTCATCCGCGACGAAGATCAAGAGAGGAGATCAGAAGACTTCAGATCTGATTGTGCTGGGTCTACCGTGGAAAACTACAGAACAAGACTTAAAAGATTACTTTAGTACGTTTGGGGAAGTCATCATGGTGCAGGTCAAGCGGGACGTGAAGACGGGAAATTCAAAAGGATTTGGGTTTGTGAGATTTGCAGAGTGGGAATCTCAGGGTAAGGTGATGTCACAGCGGCACATGATTGATGGCAGGTGGTGTGACTGCAAACTACCCAACTCAAAGCAAGGACCAGATGAACCAATGAGGAGCAGGAAAGTGTTTGTGGGCCGTTGCACGGAGGACATGACCGCGGATGAGCTCCGTCAGTTCTTCATGCAGTACGGGGAGGTCACAGATGTTTTCATTCCTAAACCCTTCAGAGCGTTTGCTTTTGTCACCTTCGCAGATGACCAGGTTGCTGCCTCCCTTTGCGGTGAGGATCTGATCATCAAGGGCGTCAGTGTGCACATCTCCAATGCTGAGCCAAAACACAACAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAACGGGTTTGGAGGTCAGGGTTTTGGAGGCAACCGTAGTGCCATGGGGGGTAGCTCCAGCAGCTTGGGAAATTTCGGCAATTTCAACCTCAACCCAGCCATGATGGCTGCCGCCCAGGCGGCCCTGCAGAGCAGTTGGGGTATGATGGGAATGTTAGCGCAGCAGGGTCAGTCGGCAACATCTGGCACAAGCACAAGCGGCACAAGTTCCACTCGGGACCAGACCCAAACATACAGCTCGGGCAACAGCAACTACGGCAGCAGCTCGGCCGCTCTCGGCTGGGGCTCCGGCTCTAACTCTAGCGGTAGTGGGTTTAATTCCAGCTTTGGCTCTAGTATGGAGTCCAAGTCGTCAGGGTGGGGTATGTAAGCCGGTTTGTGTTTGAAGTGTCGGTATTTCTAGCGTGTTTGGTAAGTATTTTCCGAGAGACTTATTTCGTCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAAGCAGTCtggggacaaaaaaaaagaatgttttgtaCACTGAATGGGATTTGAGTTAGTGTTTGGAGGGAGATGTTAACCAGGATGCTACGTTAATGTACCATCTTtggtggtgttgttttttttccccctaatgTTGTATTGTCTTGATCGATGCAAACAAAGCATTTCAACTGGATTCTTATAATGCATGTTGTACAATCTGTGGATATCTGAAAACGCATGAGAATTGCATCatattttaagtacatttatcattatgtaggacaaaaaaaccaaacaaacttGCATTGGAAAGAATCTGGTTGAAACCTGAACATATTATaagttcagctttatttcagtaCAGTTTTATGGAAACCCTTTAAAACAAGCCTTCATCAAAATCTCTTCTGCAGTTGACATCTGTGGGGTTTGCCTGGGAAGAGCGCCCTCTATGGCAGCACAGTGTGGCTGAGGTCATTATGTCACCTTCCTCCCATGTCTATATGCTCTCATCGCACGGCTCGATGACACGGGGCCTGGAATATGGCTGGCCGCAAGTGAACCCCAGGCGGGAAGTCCGTTTGGGGATGGAGGAAGATGGAGGATGCTGTGGTTCTGCATCTCTGAGCTACTAACCTGCTACGCTGACTAGCGTGAGACCTTTCTGCTGTTCATCTTGCTAAGTAAAAGTTGCTTTCTGCTGTATGGATCTTCTGAGGTGATGGTACAATGCTCCACCACTTCTTAGTTCATGCAGCTTTTCAGACCAGCAGGTGGCTTCCAAGAGATCAAAGGTTAAAATTGTAAGTCAGATCGTTCTTTTCATCTTCGTGGTGCTTTTCCTGACACCACAGTTTTATGTTCTGTCAAGG
>XR_006251208.1
AGGTAATGCCATCTTGATACGAAAATAGTGTCGCATGAGTTGTATAAAACGGAATGTTGTCGTCTTAATATTGAGTACATATAAAGAGATAgcattgttttactttattctaAATAGAAACTGACACAGTTGAGAGTGTCATTCTTCGTGAGAGTTGTGCTAAGTGTCTCATTCATTCTTAGCAGTCACATTTTTCGGAACGAGGAGCGCTGCTGCTGGTGGCGCTAACAAAGGAATATCTGGCTCCGAGCAGTTGTTCATTGCTCGATTGAGGAGAGATGGCTGAGATGTACATTCGCGTCGCGGAGGAGGAGAACGAGGAGCCGATGGAGATCCCGTCGGAGGACGACGGCACGGTGCTGCTGTCTACGGTGGCCGCTCAGTTTCCAGGGGCTTGTGGCCTGCGTTACCGGAGCCCGGTGTCTCAGTGCATGAGGGGAGTTCGCCTTGTGGACGGAATCCTACACGCCCCCGAGAACGGTTGGGGAAACCTGGTCTATGTGGTCAATTACCCCAAAGaaACGGTTCTGCCGGATAATAAGAGAAAGATGGATGAGATCGATGCTTCATCCGCGACGAAGATCAAGAGAGGAGATCAGAAGACTTCAGATCTGATTGTGCTGGGTCTACCGTGGAAAACTACAGAACAAGACTTAAAAGATTACTTTAGTACGTTTGGGGAAGTCATCATGGTGCAGGTCAAGCGGGACGTGAAGACGGGAAATTCAAAAGGATTTGGGTTTGTGAGATTTGCAGAGTGGGAATCTCAGGGTAAGGTGATGTCACAGCGGCACATGATTGATGGCAGGTGGTGTGACTGCAAACTACCCAACTCAAAGCAAGGACCAGATGAACCAATGAGGAGCAGGAAAGTGTTTGTGGGCCGTTGCACGGAGGACATGACCGCGGATGAGCTCCGTCAGTTCTTCATGCAGTACGGGGAGGTCACAGATGTTTTCATTCCTAAACCCTTCAGAGCGTTTGCTTTTGTCACCTTCGCAGATGACCAGGTTGCTGCCTCCCTTTGCGGTGAGGATCTGATCATCAAGGGCGTCAGTGTGCACATCTCCAATGCTGAGCCAAAACACAACAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAACGGGTTTGGAGGTCAGGGTTTTGGAGGCAACCGTAGTGCCATGGGGGGTAGCTCCAGCAGCTTGGGAAATTTCGGCAATTTCAACCTCAACCCAGCCATGATGGCTGCCGCCCAGGCGGCCCTGCAGAGCAGTTGGGGTATGATGGGAATGTTAGCGCAGCAGGGTCAGTCGGCAACATCTGGCACAAGCACAAGCGGCACAAGTTCCACTCGGGACCAGACCCAAACATACAGCTCGGGCAACAGCAACTACGGCAGCAGCTCGGCCGCTCTCGGCTGGGGCTCCGGCTCTAACTCTAGCGGTAGTGGGTTTAATTCCAGCTTTGGCTCTAGTATGGAGTCCAAGTCGTCAGGGTGGGGTATGTAAGCCGGTTTGTGTTTGAAGTGTCGGTATTTCTAGCGTGTTTGGTAAGTATTTTCCGAGAGACTTATTTCGTCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAAGCAGTCtggggacaaaaaaaaagaatgttttgtaCACTGAATGGGATTTGAGTTAGTGTTTGGAGGGAGATGTTAACCAGGATGCTACGTTAATGTACCATCTTtggtggtgttgttttttttccccctaatgTTGTATTGTCTTGATCGATGCAAACAAAGCATTTCAACTGGATTCTTATAATGCATGTTGTACAATCTGTGGATATCTGAAAACGCATGAGAATTGCATCatattttaagtacatttatcattatgtaggacaaaaaaaccaaacaaacttGCATTGGAAAGAATCTGGTTGAAACCTGAACATATTATaagttcagctttatttcagtaCAGTTTTATGGAAACCCTTTAAAACAAGCCTTCATCAAAATCTCTTCTGCAGTTGACATCTGTGGGGTTTGCCTGGGAAGAGCGCCCTCTATGGCAGCACAGTGTGGCTGAGGTCATTATGTCACCTTCCTCCCATGTCTATATGCTCTCATCGCACGGCTCGATGACACGGGGCCTGGAATATGGCTGGCCGCAAGTGAACCCCAGGCGGGAAGTCCGTTTGGGGATGGAGGAAGATGGAGGATGCTGTGGTTCTGCATCTCTGGTAACGGCCATGGACACGAGCTACTAACCTGCTACGCTGACTAGCGTGAGACCTTTCTGGTGATGGTACAATGCTCCACCACTTCTTAGTTCATGCAGCTTTTCAGACCAGCAGGTGGCTTCCAAGAGATCAAAGGTTAAAATTGTAAGTCAGATCGTTCTTTTCATCTTCGTGGTGCTTTTCCTGACACCACAGTTTTATGTTCTGTCAAGG
>XR_006251209.1
AGGTAATGCCATCTTGATACGAAAATAGTGTCGCATGAGTTGTATAAAACGGAATGTTGTCGTCTTAATATTGAGTACATATAAAGAGATAgcattgttttactttattctaAATAGAAACTGACACAGTTGAGAGTGTCATTCTTCGTGAGAGTTGTGCTAAGTGTCTCATTCATTCTTAGCAGTCACATTTTTCGGAACGAGGAGCGCTGCTGCTGGTGGCGCTAACAAAGGAATATCTGGCTCCGAGCAGTTGTTCATTGCTCGATTGAGGAGAGATGGCTGAGATGTACATTCGCGTCGCGGAGGAGGAGAACGAGGAGCCGATGGAGATCCCGTCGGAGGACGACGGCACGGTGCTGCTGTCTACGGTGGCCGCTCAGTTTCCAGGGGCTTGTGGCCTGCGTTACCGGAGCCCGGTGTCTCAGTGCATGAGGGGAGTTCGCCTTGTGGACGGAATCCTACACGCCCCCGAGAACGGTTGGGGAAACCTGGTCTATGTGGTCAATTACCCCAAAGaaACGGTTCTGCCGGATAATAAGAGAAAGATGGATGAGATCGATGCTTCATCCGCGACGAAGATCAAGAGAGGAGATCAGAAGACTTCAGATCTGATTGTGCTGGGTCTACCGTGGAAAACTACAGAACAAGACTTAAAAGATTACTTTAGTACGTTTGGGGAAGTCATCATGGTGCAGGTCAAGCGGGACGTGAAGACGGGAAATTCAAAAGGATTTGGGTTTGTGAGATTTGCAGAGTGGGAATCTCAGGGTAAGGTGATGTCACAGCGGCACATGATTGATGGCAGGTGGTGTGACTGCAAACTACCCAACTCAAAGCAAGGACCAGATGAACCAATGAGGAGCAGGAAAGTGTTTGTGGGCCGTTGCACGGAGGACATGACCGCGGATGAGCTCCGTCAGTTCTTCATGCAGTACGGGGAGGTCACAGATGTTTTCATTCCTAAACCCTTCAGAGCGTTTGCTTTTGTCACCTTCGCAGATGACCAGGTTGCTGCCTCCCTTTGCGGTGAGGATCTGATCATCAAGGGCGTCAGTGTGCACATCTCCAATGCTGAGCCAAAACACAACAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAACGGGTTTGGAGGTCAGGGTTTTGGAGGCAACCGTAGTGCCATGGGGGGTAGCTCCAGCAGCTTGGGAAATTTCGGCAATTTCAACCTCAACCCAGCCATGATGGCTGCCGCCCAGGCGGCCCTGCAGAGCAGTTGGGGTATGATGGGAATGTTAGCGCAGCAGGGTCAGTCGGCAACATCTGGCACAAGCACAAGCGGCACAAGTTCCACTCGGGACCAGACCCAAACATACAGCTCGGGCAACAGCAACTACGGCAGCAGCTCGGCCGCTCTCGGCTGGGGCTCCGGCTCTAACTCTAGCGGTAGTGGGTTTAATTCCAGCTTTGGCTCTAGTATGGAGTCCAAGTCGTCAGGGTGGGGTATGTAAGCCGGTTTGTGTTTGAAGTGTCGGTATTTCTAGCGTGTTTGGTAAGTATTTTCCGAGAGACTTATTTCGTCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAAGCAGTCtggggacaaaaaaaaagaatgttttgtaCACTGAATGGGATTTGAGTTAGTGTTTGGAGGGAGATGTTAACCAGGATGCTACGTTAATGTACCATCTTtggtggtgttgttttttttccccctaatgTTGTATTGTCTTGATCGATGCAAACAAAGCATTTCAACTGGATTCTTATAATGCATGTTGTACAATCTGTGGATATCTGAAAACGCATGAGAATTGCATCatattttaagtacatttatcattatgtaggacaaaaaaaccaaacaaacttGCATTGGAAAGAATCTGGTTGAAACCTGAACATATTATaagttcagctttatttcagtaCAGTTTTATGGAAACCCTTTAAAACAAGCCTTCATCAAAATCTCTTCTGCAGTTGACATCTGTGGGGTTTGCCTGGGAAGAGCGCCCTCTATGGCAGCACAGTGTGGCTGAGGTCATTATGTCACCTTCCTCCCATGTCTATATGCTCTCATCGCACGGCTCGATGACACGGGGCCTGGAATATGGCTGGCCGCAAGTGAACCCCAGGCGGGAAGTCCGTTTGGGGATGGAGGAAGATGGAGGATGCTGTGGTTCTGCATCTCTGAGCTACTAACCTGCTACGCTGACTAGCGTGAGACCTTTCTGGTGATGGTACAATGCTCCACCACTTCTTAGTTCATGCAGCTTTTCAGACCAGCAGGTGGCTTCCAAGAGATCAAAGGTTAAAATTGTAAGTCAGATCGTTCTTTTCATCTTCGTGGTGCTTTTCCTGACACCACAGTTTTATGTTCTGTCAAGG

Function

symbol description
tardbp Enables double-stranded DNA binding activity; identical protein binding activity; and mRNA 3'-UTR binding activity. Involved in several processes, including negative regulation by host of viral transcription; nuclear inner membrane organization; and regulation of mRNA stability. Located in nucleoplasm. Implicated in Parkinson's disease; amyotrophic lateral sclerosis; amyotrophic lateral sclerosis type 10; and motor neuron disease. Biomarker of Lewy body dementia; neurodegenerative disease (multiple); and progressive supranuclear palsy.

NR:

description
PREDICTED: TAR DNA-binding protein 43-like isoform X1

GO:

id name namespace
GO:0007626 locomotory behavior biological_process
GO:0048675 axon extension biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K23600 TARDBP, TDP43; TAR DNA-binding protein 43

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242500.1 False 2816 mRNA 0.47 6 22745099 22750947
XR_006251205.1 True 2875 transcript 0.45 7 22744262 22750947
XR_006251206.1 False 2474 transcript 0.48 10 22739972 22750947
XR_006251207.1 False 2456 transcript 0.48 10 22739972 22750947
XR_006251208.1 False 2423 transcript 0.49 10 22739972 22750947
XR_006251209.1 False 2405 transcript 0.48 10 22739972 22750947

Neighbor

gene id symbol gene type direction distance location
epha2a epha2a,LOC107667034,LOC107680717,LOC107555973,LOC107708742,LOC107599423 coding downstream 14925 22712509 ~ 22725047 (-)
rbm19 rbm19 coding downstream 28978 22700799 ~ 22710994 (-)
cntn3b cntn3b,LOC107555980,LOC107599411,LOC107713475,LOC107708733,LOC108271503,LOC107666965 coding downstream 444666 22233877 ~ 22295306 (-)
pdzrn3b pdzrn3b,LOC107599412,LOC107713474,LOC107667029,LOC107584480,LOC107680714,LOC107732041 coding downstream 591489 22073623 ~ 22148483 (-)
shq1 shq1,LOC107713517,LOC107667015,LOC107732040 coding downstream 700973 22009824 ~ 22038999 (-)
ca16b ca16b,LOC107667014,LOC107713530,LOC107560997,LOC107555963,LOC107708736,LOC107592848 coding upstream 877 22751824 ~ 22822451 (-)
camk1a camk1a,LOC107708108,LOC107713533,LOC107667041,LOC107680695,LOC108427562,LOC108271991 coding upstream 135872 22886819 ~ 22904298 (-)
kcnb1 kcnb1,LOC107667042,LOC107713536,LOC107680683,LOC108272148 coding upstream 188505 22939452 ~ 22967456 (-)
ptgis ptgis,LOC107667039,LOC107713538,LOC107680687,LOC107708106,LOC107555969 coding upstream 217198 22968145 ~ 22975843 (-)
tarbp2 tarbp2,LOC107713493,LOC107666976,LOC107549310,LOC107708175,LOC107561017,LOC107680718 coding upstream 277989 23028936 ~ 23033283 (-)
G47412 NA non-coding downstream 29344 22697899 ~ 22710628 (-)
G47334 NA non-coding downstream 328533 22342122 ~ 22411439 (-)
G47306 gxylt2,LOC107713518,LOC107666964,LOC107584478,LOC107732048,LOC107599434,LOC107680697 non-coding downstream 692237 22047110 ~ 22047735 (-)
G47297 NA non-coding downstream 734990 22004780 ~ 22004982 (-)
G47283 NA non-coding downstream 938940 21800278 ~ 21801032 (-)
G47435 NA non-coding upstream 132716 22883663 ~ 22884833 (-)
G47508 LOC107680689,LOC107561011,LOC107713535 non-coding upstream 160524 22911471 ~ 22912033 (-)
G47523 NA non-coding upstream 263917 23014864 ~ 23015613 (-)
G47863 NA non-coding upstream 1294837 24045784 ~ 24048986 (-)
G47860 NA non-coding upstream 1307627 24058574 ~ 24059263 (-)
mdfic2 LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432 other downstream 1384591 21348619 ~ 21355381 (-)
G46926 NA other downstream 2208138 20529179 ~ 20531834 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other downstream 2573693 20161440 ~ 20166279 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other downstream 2637513 20096024 ~ 20102459 (-)
mustn1a mustn1a other downstream 2739334 19998632 ~ 20000638 (-)
G47535 LOC102793276,LOC101471251,LOC100701884,LOC102312415,LOC102199361 other upstream 370836 23121783 ~ 23163157 (-)
G47590 NA other upstream 648402 23399349 ~ 23400502 (-)
LOC122347542 grm8b,LOC107659486,LOC107698172,LOC107752348,LOC107575719,LOC107598887,LOC107753676 other upstream 902242 23653189 ~ 23656456 (-)
G47627 NA other upstream 924325 23675272 ~ 23676792 (-)
rap1gapb si:dkey-166d12.2,LOC107708062,LOC107655773,LOC107666145,LOC107729774 other upstream 1216574 23967521 ~ 24038319 (-)

Expression


Co-expression Network