glmnb (glmnb,LOC107659021,LOC107692340,LOC107590673,LOC107731827)


Basic Information

Item Value
gene id glmnb
gene name glmnb,LOC107659021,LOC107692340,LOC107590673,LOC107731827
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13471896 ~ 13478911 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242546.1
TGGATTGTTTTTGAACAGACCGGCTCTGAAAATGGCAGCATATCAACTAGAGGATGTGCTTCAAAGATGGAGAACAACTGAAGACTTTAAACCAGAGGACCATGACCTCTTTCTGAATGCTGGTCGTACATGTATTGCTCAAGGTGATTACACTCAACTCCTGGACTTCATAAAAGAGGAGGCCAATCAGCACGTAGTGAGGTCTATGGGCAGTGGTCTGCTTCCTGCACTGGTGAATGAAGTGCTGAGAAAGGACCAGAGTCCTGCCAACTGTCAGGCTGTCCTCAATCAGCTTGTACAGATATGCAGTGAGGAAGAACTCCTTGATATTTTACTTCAGCAAGTGGAGGAAACTGATCCAAATGCCATTGCAGACACTATCACTGTCCTTATGCCTCTAATTCAGTCAGTGCTGTTCAGAATGAGTGAGTCGAAGGCCTGTGGATTGGCTTTGGCCCTTGATTCTCTGCAGAAACAGATTTCAAAGCTGCCTGTACCTTACTCACAgaaacaggaacaggaagatGTGTACGGGCTCTGTCGATGCTGCACTGCAGTACTGACCTTTGTACAACCCTTTGTGCAGGAAGTCAAGAATCAAGACACAAACTCAGTGGCCACCACACTAAGAGCTGCTCTTCTAAAGTTTGTCATGAATAGTCTAAGGGAACCTCTCCTCCAAGTTCAACTGGACAGAGAGGCGAACGTGACAGAAATTTCACCCTTGTGGAATTTTGCAACAGAAATAATGGAAATCCTAGCAGTGGTCCACCAATCTCTGCCAAAAATCCTGTTCTACCATTCCTGGAGAGGAAAGGAAGACATGATTTCAAAGAAAGATGATTTTCATCTGAATGAATCAAGAGCTTGCATGGCTTACTTGCTATTTGTCCAGCTTATTGCCATAGAAGTGTTTCCTGCAGTTTTTAGccCTGTTTTCGTCCTGCAGTGTAATATGGAATACGTCAATCTTCTTTTAAGCAGAAAGGATGAATCATGGACATTGAAAGGACTGGACTTACATGTTAAAAGTTTGGAAAGAGTAACAGATTGCAGTCTCCCAGTGGAGCTCTTAGAGCTGAAACCGTTTCACGAGGTTCCAAAGAACCTAATTACAATTATGATTGAATGTCCTATCCAGAATCTGAGAGGAAAAAGCCTTGTGGTGTTCCAGCTCTTTATAGAGAAGCTTAATGGTGAGGCCAAGCACACATTTTTCAGACGCATCATAAAGACAAGCCATCATGCAGGTGTAGAAAGcatcatcatcaaaaatataaagaatcaAGTGGAACGGTGCAGAAAGTCAGGCTATGAAGACAGCTGGTTTGAGGGGACTCTGCTCATCTCACTGCTCAGAGACACTCTTGTTCTCCCACAGGGCCATGAAACCGACTTGCTACATGGGATGGACAGgGTGATGGAGTCTCTGAATCTTGTGCGATATTTATTGCTACAGGAAAGAAAGGTTTCTACTGGAACATGGACAGACCTGTGCCACATTGCAGAGAGTTACACAAAATTATTACGACAATGTCTAAGCATGTCAAAATCATACTATGGTACAGAGTTAAAAAGACTAAGGGAGGACAAAAAAATCAAGGCTAAAGAATTTAAGGAGGCCTCTGGGAAGAGATCAGTTCAGAGCTTGATTGTGAAAACGGAGATGCTTGGCAACATGCCATATGAGACACAGGATAAGGTCTTGCAGTGTGCCTTGGTCACATATGACTTAATGGAAAGCCTTGTGGTCCGTATAGAGGAAATCATTGAGGACGGTCAAAAATGAAATGGGGACAATTGCTGCTTTCTGAACTTAATagtctattaatttattttcct

Function

symbol description
glmnb Predicted to enable ubiquitin-protein transferase inhibitor activity. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in arteriovenous malformation and glomus tumor. Orthologous to human GLMN (glomulin, FKBP associated protein).

NR:

description
PREDICTED: glomulin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242546.1 True 1842 mRNA 0.43 18 13471896 13478911

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc_55 NA coding downstream 3957 13467868 ~ 13467939 (-)
trnaa-ugc_115 NA coding downstream 4331 13467494 ~ 13467565 (-)
trnaa-ugc_114 NA coding downstream 4670 13467155 ~ 13467226 (-)
trnaa-cgc_54 NA coding downstream 4839 13466986 ~ 13467057 (-)
trnaa-cgc_53 NA coding downstream 5031 13466794 ~ 13466865 (-)
gfi1ab gfi1,gfi1ab,LOC107659005,LOC107590681,LOC107692343,LOC107566482 coding upstream 11039 13489950 ~ 13495596 (-)
evi5b evi5,LOC107590647,LOC107692341,LOC107566483 coding upstream 17224 13496135 ~ 13535440 (-)
dipk1ab fam69a,fam69ab,LOC107590645,LOC107659006,LOC107566484 coding upstream 64296 13543207 ~ 13561025 (-)
zbtb11 zbtb11,LOC107731844,LOC107659025,LOC107590644,LOC107732022,LOC107692345,LOC107566487 coding upstream 83134 13562045 ~ 13569922 (-)
dpt dpt,LOC107659007,LOC107732012,LOC107590680,LOC107692436 coding upstream 99881 13578792 ~ 13585368 (-)
G44942 NA non-coding downstream 114375 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 117113 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 117716 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 118246 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 118827 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 58033 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 214427 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 218588 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 344761 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 358394 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 574178 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2402430 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2486764 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2636371 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 176349 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 239291 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 681564 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1848672 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2010207 15489118 ~ 15490685 (-)

Expression


Co-expression Network