LOC122347353 (LOC107731845,LOC107659022,LOC107692422)


Basic Information

Item Value
gene id LOC122347353
gene name LOC107731845,LOC107659022,LOC107692422
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13469404 ~ 13471933 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242547.1
CGCCACATCCGAATATCATTTATCTGGAAATGGCAATCGATACCAACACCTCTTGGAAAACAACACTTATAATCAGCGCCTCCCCTAAGTGTGATGAAGCCTCGCAGATTCTTCTAGCGCAGCACCACAGGATTCGCCGATCGGACAGTATTTTATCCTCTTCCTTTGTTTCCCCCTTGTCAgGTACAGCTTTCTTGCTGCTCACACCCGAGGAGTTTCCAGCTAAGCTTGAGAATGCAGAATTTTTGGAGAGAATTGAGAAATTTGTGCAGGTCCATAGGAACAGTTTTCTTCTGCTTCAAGCCCCAGTTTATGGAAAAAGGGAGTGGGAGATTTTATCGTCTGTGCAAAACAGatTTCTTGGCCGTAACCTCAGAGTCATACCTGTGCACAGCACTGCTGATGTAGTGAAGGGAATTCTGGTCATCGCCAAAGCCACAAGTAAACCCAGTGTGGTGAATTTGAGAGATCAGATGTCTTTGGCTTGTACTCACATCATTGATCGTAGCCCAGTTTGGGGAATGCTTCGAGGGATGGAGTTCTAGAGATGTTCCTCTCCATTCATGTCCTTATTGATGACTATGCTTGTTTTGAACAGCAGATGTCAGTATTGTTTCATAGTAAGTGTTGTGTCAAAACGGTTTCTTGCCGTTCATCATTTGTTGTTTagccttaaaaaaacatttactattaaGAAAAAAGTAACATAGTCAGAGGAAAACTCTTAAACCTTTTATTCGTGCTGGAAAAATCTTCAAGGACAGAACACAGAATAGTATTGAAAATATTGATATCGTAACTCTTACATTGTTCCATTGTTCCTTATCATTTCAAATGTGTCATGCTACAGAGgaggaaaataaattaatagactATTAAGTTCAGAAAGCA
>XM_043242548.1
CGCCACATCCGAATATCATTTATCTGGAAATGGCAATCGATACCAACACCTCTTGGAAAACAACACTTATAATCAGCGCCTCCCCTAAGTGTGATGAAGCCTCGCAGATTCTTCTAGCGCAGCACCACAGGATTCGCCGATCGGACAGTACAGCTTTCTTGCTGCTCACACCCGAGGAGTTTCCAGCTAAGCTTGAGAATGCAGAATTTTTGGAGAGAATTGAGAAATTTGTGCAGGTCCATAGGAACAGTTTTCTTCTGCTTCAAGCCCCAGTTTATGGAAAAAGGGAGTGGGAGATTTTATCGTCTGTGCAAAACAGatTTCTTGGCCGTAACCTCAGAGTCATACCTGTGCACAGCACTGCTGATGTAGTGAAGGGAATTCTGGTCATCGCCAAAGCCACAAGTAAACCCAGTGTGGTGAATTTGAGAGATCAGATGTCTTTGGCTTGTACTCACATCATTGATCGTAGCCCAGTTTGGGGAATGCTTCGAGGGATGGAGTTCTAGAGATGTTCCTCTCCATTCATGTCCTTATTGATGACTATGCTTGTTTTGAACAGCAGATGTCAGTATTGTTTCATAGTAAGTGTTGTGTCAAAACGGTTTCTTGCCGTTCATCATTTGTTGTTTagccttaaaaaaacatttactattaaGAAAAAAGTAACATAGTCAGAGGAAAACTCTTAAACCTTTTATTCGTGCTGGAAAAATCTTCAAGGACAGAACACAGAATAGTATTGAAAATATTGATATCGTAACTCTTACATTGTTCCATTGTTCCTTATCATTTCAAATGTGTCATGCTACAGAGgaggaaaataaattaatagactATTAAGTTCAGAAAGCA

Function

NR:

description
PREDICTED: uncharacterized protein C1orf146 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242547.1 True 891 mRNA 0.41 5 13469404 13471933
XM_043242548.1 False 855 mRNA 0.41 5 13469404 13471933

Neighbor

gene id symbol gene type direction distance location
tp63 tp63,LOC107574491,LOC107590651,LOC107659018,LOC107752631,LOC107696778 coding upstream 78753 13350521 ~ 13390651 (+)
tprg1 tprg1,LOC107590652,LOC107751286,LOC107684336,LOC107552257,LOC107696755,LOC107752662 coding upstream 135830 13314057 ~ 13333574 (+)
LOC122346939 lpp,LOC107684332,LOC107590653,LOC107717931,LOC107696776,LOC107752632,LOC107552245,LOC108427685 coding upstream 190224 13119195 ~ 13279180 (+)
inpp5d LOC107694111,LOC107590654,LOC107717933,LOC107696774,LOC107552268,LOC107752650 coding upstream 389358 13065838 ~ 13080046 (+)
gpr17 gpr17,LOC107752663,LOC107717943,LOC107694121,LOC107590682,LOC107552259,LOC107696754 coding upstream 404975 13058859 ~ 13064429 (+)
rpl5b rpl5b,rpl5,LOC107659024,LOC107590646,LOC107732018,LOC107566486,LOC107692344,LOC103368809 coding downstream 64578 13536511 ~ 13542567 (+)
atp1b1a NA coding downstream 126606 13598539 ~ 13607514 (+)
zgc:172121 zgc:172121,LOC107659029,LOC107692348,LOC107732016,LOC107590642,LOC107731828 coding downstream 167061 13638994 ~ 13644273 (+)
si:ch211-201h21.5 si:ch211-201h21.5,LOC107659008,LOC107731846,LOC107590672 coding downstream 180463 13652396 ~ 13655156 (+)
actl6a actl6a,LOC107659031 coding downstream 212496 13684429 ~ 13690950 (+)
G44899 NA non-coding upstream 51564 13417558 ~ 13417840 (+)
G44898 NA non-coding upstream 52432 13416759 ~ 13416972 (+)
G44890 NA non-coding upstream 69856 13399022 ~ 13399548 (+)
G44886 NA non-coding upstream 111416 13357403 ~ 13357988 (+)
G44885 NA non-coding upstream 112780 13356269 ~ 13356624 (+)
LOC122346508 NA non-coding downstream 117952 13589885 ~ 13594601 (+)
G44997 bivm,LOC107732014,LOC107659026,LOC107548643,LOC107731835,LOC107692346 non-coding downstream 178182 13650115 ~ 13650883 (+)
LOC122346715 NA non-coding downstream 184259 13656192 ~ 13657766 (+)
G44998 LOC102783117 non-coding downstream 189879 13661812 ~ 13662097 (+)
G45056 NA non-coding downstream 364674 13836607 ~ 13836819 (+)
G44887 NA other upstream 59492 13394229 ~ 13409912 (+)
G44645 NA other upstream 360038 13108735 ~ 13109366 (+)
smx5 lsm2,LSM2,smx5 other upstream 387285 13080565 ~ 13082119 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 663704 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 942447 12521773 ~ 12526957 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 500240 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 1764232 15236165 ~ 15244280 (+)
G45419 sgip1,sgip1a,LOC107739126 other downstream 1886928 15358861 ~ 15459386 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 2093048 15564981 ~ 15566668 (+)
G45894 NA other downstream 3714775 17186708 ~ 17187308 (+)

Expression


Co-expression Network