larp4ab (LOC107585124,LOC107711054,LOC107673512,LOC107667382,LOC107740568)


Basic Information

Item Value
gene id larp4ab
gene name LOC107585124,LOC107711054,LOC107673512,LOC107667382,LOC107740568
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19448028 ~ 19461259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242585.1
GCTCTGTTGCCAGGGAAGAGCGATGGAGGGGGTGCTCGCATTGTCTGTCGGGACGGTGGCGGTGCGTGAATGTCTGCCGTCTGTCAGAAACGCTCTCCGATGCCTATTAAGGCTTATTAGTGTATGAAACAGACCCGTGCCGGAGATAGATTAGCAAGCGTCAGCGATCCTTTTTCCTCCCTTACTTCATTCGTTGAGTTTCCGAAACGGTAAGACAAACCGACCCTAACTAGCTAGAGCAAGCGCTTGTTGCGTTCAGCCggtgagaggaggagaggagtgGTGGATCGGGCGAGGAGGCGCACGGCGCTTGATCGGAGAGCCAAAGGCGGCCGATGACTTCGGAGAGCAGCGGCCAAGCGCAACAGAAGGAGGAGGTCGAGCCGGGATCAGTCGCCCGAGATCAAGAGGAGAAAACCGGCAAAGACCAAGGCGGCATGGTGACCACCAAGGGGGCCGGTCTGAATCCCAATGCTAAAGTGTGGCAGGAAGTGTCTGCTCCAACCACCCAGACTCCAGAGGCAGCCACAGAGACATGCCATTGGCCACAAGCAGATACAGTCTCCAATGAGGAGTCagaagGTTTCAAGGAGTATGATGTTGGGTATGACTCTGAGTCAGCCCCTCCTATGGAGAACAGCATGTTGAATGGCATGGAGTCTGCAGAACTGGTGTACCCTCTCTATGAACCAGTGGATGGTGAGACAGTTGAGGAACAGCCTCCGTTGACTGAAGAGAGTCTGAAGGAGTCACTGAAAAAACAGCTGGAATTTTGCTTCTCAAGAGAGAATCTCTCCAAGGACCTTTACCTGATGTCCCAGATGGATAGTGATCAGTTTGTGCCTATTTGGACTATTGCAAGCATGGAGGGGGTCAAACTGCTGACTACTGATATGGACCTGATACTCGAGGTGCTACGAGCCTCTCCCATGGTTCAGGTGGATGAGAAGGGAGAGAAGGTACGGCCAAACCATAAGCGTTGCATCATCATTCTCAGAGAGGTTCCTGAGACCACACCTGTAGAGGAGGTGGAGGCCCTgtttaaaagtgaaaagtgtCCGCAGGTTATCAGTGTGGAGTTTGCGCACAATAACAACTGGTACATCACATTCCAGTCAGACACTGATGCTCAGCAGGCCTATAGATACCTCCGTGAGGAAGTCAAAACCTTTCAGGGCAAACCAATTATGGCTCGTATAAAAGCCATAAACACTTTCTTTGCTAAGAACGGCTATGGGGCTGTTGACTCTGGGGTTTACTCCACTCCATCACAGTACTCCTCTCCAGTGTACCTGCAGCAGGTGTATCAGCCTCCACAGCAGTACCCTCTCTATAGCCTCCTGCCTCAGACATGGACTCCTTCACCAACCCCTTACTTTGAAACGCCACTGGCTCCATTTCCCAACAGCACATTTGTTAATGGCTTTGGCACAGCAGGAAACTACAAAACTGGATCCTCTCCAATAAGCCTTACACGTAACTACCCCCGCAACCGACTTCCACTTTATTCGAGAAAGAATGTAATCAATGCCTTCAGGAATCATGTGAAGCCACAACCTCGTGCTGAAGTGGGTCAGCTGACAGAGACTTTATCTGGTACCGGTAGTCCTCAGCCTCCATGCACCCCTACATCAGATTCCACTGCGTCCACCCTTACTCCGCTTTCTGACTCGCCTGCTTCCCCCAGAGAGAACCTCCACTCAGATCTCAGCAGCcgggccagGAGAGGAAGCTATCGTGGCatgaggaggagaagagaagaTGAAAGAACAAGGCCGAACCCTGAATCAGAAGTGAAAGCTCCACCTCCTAAGTTTGACCTCGCAACCACTAACTTCCCACCATTGCCAGGAGGTGTCCCGAGTCGTGTGCCAGGTGTGACTGTGCAAACAGAATCAGTGTTGGAAAATCGGATGGCTGATGTAGTTAAGGGCATCAGCAGGGACAAGccGGAAACATCTAAACAAGATGTCAGTCAAGATCCTGAACCGTGTCCAGTGGAAGCTCAGTCGAACGGACCCTCTACTCCAGCGCCAAAGCTTTCTGCCACAAAACAGGACTCACCTACCACTAGTGCGTTACATCAAGTGAAGAGACCTGAGAAAGAGGTCCAGGTCTCTGACACACCACCAGACCTTGCATCGGTGACGACAAAGCACATCCAGCCCAGTTCTGCCCCTAAACCTTCATGCTGCCAGTCAAGCACTTCAAGCACTGCATCTACACCACCTGCCCCAACAAGCGCAACTGTCCAGGAGCCTCGGAAGCTAAGCTATGCAGAGGTGTGTCAGAGGCCACCCAAAGACCCACCCCCTGCACCGACCGCCCCACCCAGCCCCAGTCCCACCCCTTCTCCCACCACAAACCAGCCACTACGTGAACCTCGCGTCAACAAAGCGGAAGGCCCAGCCTCATCCCGCTGCAGTCCTGGTGACAAACTGGAGAAAGGAAATGAGAGTCGGATGTCCAGAGAGCAGACTGGCTACCAACATGGTAACGGCCCCAGAGGGTCAGGTTTTAAGCTCAGAGAGCAGCAGAGACGGCCCCTACAGGGTCGGCGCTCCTCTCCACAGATGGGGTACAACAGACGCAGtggaaaagaacaaaacatCCCACCAAGTTCGCCAAAGTAATGCCTCATATGCCCACAACACATGTGCACACGTGTGTCTATGTGTGAta
>XM_043242586.1
TCTGTTGCCAGGGAAGAGCGATGGAGGGGGTGCTCGCATTGTCTGTCGGGACGGTGGCGGTGCGTGAATGTCTGCCGTCTGTCAGAAACGCTCTCCGATGCCTATTAAGGCTTATTAGTGTATGAAACAGACCCGTGCCGGAGATAGATTAGCAAGCGTCAGCGATCCTTTTTCCTCCCTTACTTCATTCGTTGAGTTTCCGAAACGGTAAGACAAACCGACCCTAACTAGCTAGAGCAAGCGCTTGTTGCGTTCAGCCggtgagaggaggagaggagtgGTGGATCGGGCGAGGAGGCGCACGGCGCTTGATCGGAGAGCCAAAGGCGGCCGATGACTTCGGAGAGCAGCGGCCAAGCGCAACAGAAGGAGGAGGTCGAGCCGGGATCAGTCGCCCGAGATCAAGAGGAGAAAACCGGCAAAGACCAAGGCGGCATGGTGACCACCAAGGGGGCCGGTCTGAATCCCAATGCTAAAGTGTGGCAGGAAGTGTCTGCTCCAACCACCCAGACTCCAGAGGCAGCCACAGAGACATGCCATTGGCCACAAGCAGATACAGTCTCCAATGAGGAGTCagaagGTTTCAAGGAGTATGATGTTGGGTATGACTCTGAGTCAGCCCCTCCTATGGAGAACAGCATGTTGAATGGCATGGAGTCTGCAGAACTGGTGTACCCTCTCTATGAACCAGTGGATGGTGAGACAGTTGAGGAACAGCCTCCGTTGACTGAAGAGAGTCTGAAGGAGTCACTGAAAAAACAGCTGGAATTTTGCTTCTCAAGAGAGAATCTCTCCAAGGACCTTTACCTGATGTCCCAGATGGATAGTGATCAGTTTGTGCCTATTTGGACTATTGCAAGCATGGAGGGGGTCAAACTGCTGACTACTGATATGGACCTGATACTCGAGGTGCTACGAGCCTCTCCCATGGTTCAGGTGGATGAGAAGGGAGAGAAGGTACGGCCAAACCATAAGCGTTGCATCATCATTCTCAGAGAGGTTCCTGAGACCACACCTGTAGAGGAGGTGGAGGCCCTgtttaaaagtgaaaagtgtCCGCAGGTTATCAGTGTGGAGTTTGCGCACAATAACAACTGGTACATCACATTCCAGTCAGACACTGATGCTCAGCAGGCCTATAGATACCTCCGTGAGGAAGTCAAAACCTTTCAGGGCAAACCAATTATGGCTCGTATAAAAGCCATAAACACTTTCTTTGCTAAGAACGGCTATGGGGCTGTTGACTCTGGGGTTTACTCCACTCCATCACAGTACTCCTCTCCAGTGTACCTGCAGCAGGTGTATCAGCCTCCACAGCAGTACCCTCTCTATAGCCTCCTGCCTCAGACATGGACTCCTTCACCAACCCCTTACTTTGAAACGCCACTGGCTCCATTTCCCAACAGCACATTTGTTAATGGCTTTGGCACAGCAGGAAACTACAAAACTGGATCCTCTCCAATAAGCCTTACACGTAACTACCCCCGCAACCGGAATCATGTGAAGCCACAACCTCGTGCTGAAGTGGGTCAGCTGACAGAGACTTTATCTGGTACCGGTAGTCCTCAGCCTCCATGCACCCCTACATCAGATTCCACTGCGTCCACCCTTACTCCGCTTTCTGACTCGCCTGCTTCCCCCAGAGAGAACCTCCACTCAGATCTCAGCAGCcgggccagGAGAGGAAGCTATCGTGGCatgaggaggagaagagaagaTGAAAGAACAAGGCCGAACCCTGAATCAGAAGTGAAAGCTCCACCTCCTAAGTTTGACCTCGCAACCACTAACTTCCCACCATTGCCAGGAGGTGTCCCGAGTCGTGTGCCAGGTGTGACTGTGCAAACAGAATCAGTGTTGGAAAATCGGATGGCTGATGTAGTTAAGGGCATCAGCAGGGACAAGccGGAAACATCTAAACAAGATGTCAGTCAAGATCCTGAACCGTGTCCAGTGGAAGCTCAGTCGAACGGACCCTCTACTCCAGCGCCAAAGCTTTCTGCCACAAAACAGGACTCACCTACCACTAGTGCGTTACATCAAGTGAAGAGACCTGAGAAAGAGGTCCAGGTCTCTGACACACCACCAGACCTTGCATCGGTGACGACAAAGCACATCCAGCCCAGTTCTGCCCCTAAACCTTCATGCTGCCAGTCAAGCACTTCAAGCACTGCATCTACACCACCTGCCCCAACAAGCGCAACTGTCCAGGAGCCTCGGAAGCTAAGCTATGCAGAGGTGTGTCAGAGGCCACCCAAAGACCCACCCCCTGCACCGACCGCCCCACCCAGCCCCAGTCCCACCCCTTCTCCCACCACAAACCAGCCACTACGTGAACCTCGCGTCAACAAAGCGGAAGGCCCAGCCTCATCCCGCTGCAGTCCTGGTGACAAACTGGAGAAAGGAAATGAGAGTCGGATGTCCAGAGAGCAGACTGGCTACCAACATGGTAACGGCCCCAGAGGGTCAGGTTTTAAGCTCAGAGAGCAGCAGAGACGGCCCCTACAGGGTCGGCGCTCCTCTCCACAGATGGGGTACAACAGACGCAGtggaaaagaacaaaacatCCCACCAAGTTCGCCAAAGTAATGCCTCATATGCCCACAACACATGTGCACACGTGTGTCTATGTGTGAta
>XM_043242587.1
AGGAAAGACAAGCGCACGGCCAATCAGACTCCCGAAGCGCCGTGTAGATGCTTACGCACAGCAAAGGGGATTGATGCGGATGATGAGTGGCCGCGAAACTCTTTGGCAGTGAACTTGCACTTTTGCTCGAAACGGAAAGAAGTGGAATCCGGTTCCGCGTTTTTCTGAGCTAGGTTAATTCGCCTACTGGATATTTAGCGAGTGATAACGTTGTCGGGGGAGAAGACCATGTTGTTGTTTGTGGAGGTGACCACCAAGGGGGCCGGTCTGAATCCCAATGCTAAAGTGTGGCAGGAAGTGTCTGCTCCAACCACCCAGACTCCAGAGGCAGCCACAGAGACATGCCATTGGCCACAAGCAGATACAGTCTCCAATGAGGAGTCagaagGTTTCAAGGAGTATGATGTTGGGTATGACTCTGAGTCAGCCCCTCCTATGGAGAACAGCATGTTGAATGGCATGGAGTCTGCAGAACTGGTGTACCCTCTCTATGAACCAGTGGATGGTGAGACAGTTGAGGAACAGCCTCCGTTGACTGAAGAGAGTCTGAAGGAGTCACTGAAAAAACAGCTGGAATTTTGCTTCTCAAGAGAGAATCTCTCCAAGGACCTTTACCTGATGTCCCAGATGGATAGTGATCAGTTTGTGCCTATTTGGACTATTGCAAGCATGGAGGGGGTCAAACTGCTGACTACTGATATGGACCTGATACTCGAGGTGCTACGAGCCTCTCCCATGGTTCAGGTGGATGAGAAGGGAGAGAAGGTACGGCCAAACCATAAGCGTTGCATCATCATTCTCAGAGAGGTTCCTGAGACCACACCTGTAGAGGAGGTGGAGGCCCTgtttaaaagtgaaaagtgtCCGCAGGTTATCAGTGTGGAGTTTGCGCACAATAACAACTGGTACATCACATTCCAGTCAGACACTGATGCTCAGCAGGCCTATAGATACCTCCGTGAGGAAGTCAAAACCTTTCAGGGCAAACCAATTATGGCTCGTATAAAAGCCATAAACACTTTCTTTGCTAAGAACGGCTATGGGGCTGTTGACTCTGGGGTTTACTCCACTCCATCACAGTACTCCTCTCCAGTGTACCTGCAGCAGGTGTATCAGCCTCCACAGCAGTACCCTCTCTATAGCCTCCTGCCTCAGACATGGACTCCTTCACCAACCCCTTACTTTGAAACGCCACTGGCTCCATTTCCCAACAGCACATTTGTTAATGGCTTTGGCACAGCAGGAAACTACAAAACTGGATCCTCTCCAATAAGCCTTACACGTAACTACCCCCGCAACCGACTTCCACTTTATTCGAGAAAGAATGTAATCAATGCCTTCAGGAATCATGTGAAGCCACAACCTCGTGCTGAAGTGGGTCAGCTGACAGAGACTTTATCTGGTACCGGTAGTCCTCAGCCTCCATGCACCCCTACATCAGATTCCACTGCGTCCACCCTTACTCCGCTTTCTGACTCGCCTGCTTCCCCCAGAGAGAACCTCCACTCAGATCTCAGCAGCcgggccagGAGAGGAAGCTATCGTGGCatgaggaggagaagagaagaTGAAAGAACAAGGCCGAACCCTGAATCAGAAGTGAAAGCTCCACCTCCTAAGTTTGACCTCGCAACCACTAACTTCCCACCATTGCCAGGAGGTGTCCCGAGTCGTGTGCCAGGTGTGACTGTGCAAACAGAATCAGTGTTGGAAAATCGGATGGCTGATGTAGTTAAGGGCATCAGCAGGGACAAGccGGAAACATCTAAACAAGATGTCAGTCAAGATCCTGAACCGTGTCCAGTGGAAGCTCAGTCGAACGGACCCTCTACTCCAGCGCCAAAGCTTTCTGCCACAAAACAGGACTCACCTACCACTAGTGCGTTACATCAAGTGAAGAGACCTGAGAAAGAGGTCCAGGTCTCTGACACACCACCAGACCTTGCATCGGTGACGACAAAGCACATCCAGCCCAGTTCTGCCCCTAAACCTTCATGCTGCCAGTCAAGCACTTCAAGCACTGCATCTACACCACCTGCCCCAACAAGCGCAACTGTCCAGGAGCCTCGGAAGCTAAGCTATGCAGAGGTGTGTCAGAGGCCACCCAAAGACCCACCCCCTGCACCGACCGCCCCACCCAGCCCCAGTCCCACCCCTTCTCCCACCACAAACCAGCCACTACGTGAACCTCGCGTCAACAAAGCGGAAGGCCCAGCCTCATCCCGCTGCAGTCCTGGTGACAAACTGGAGAAAGGAAATGAGAGTCGGATGTCCAGAGAGCAGACTGGCTACCAACATGGTAACGGCCCCAGAGGGTCAGGTTTTAAGCTCAGAGAGCAGCAGAGACGGCCCCTACAGGGTCGGCGCTCCTCTCCACAGATGGGGTACAACAGACGCAGtggaaaagaacaaaacatCCCACCAAGTTCGCCAAAGTAATGCCTCATATGCCCACAACACATGTGCACACGTGTGTCTATGTGTGAta

Function

NR:

description
PREDICTED: la-related protein 4-like isoform X2

GO: NA

KEGG:

id description
K18763 LARP4; la-related protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242585.1 True 2682 mRNA 0.53 17 19448028 19461259
XM_043242586.1 False 2638 mRNA 0.53 16 19448028 19461257
XM_043242587.1 False 2488 mRNA 0.52 17 19448028 19458219

Neighbor

gene id symbol gene type direction distance location
atf7b atf7b,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698 coding downstream 3417 19435181 ~ 19444611 (-)
dip2bb dip2bb,LOC107673535,LOC107740567,LOC107711059 coding downstream 13815 19404467 ~ 19434213 (-)
atf1 atf1,LOC107740571,LOC107582700,LOC107667378,LOC107673536,LOC107585126,LOC108271751 coding downstream 44015 19398856 ~ 19404013 (-)
scn8ab scn8ab,LOC107667357,LOC107673511,LOC107582701,LOC107585129 coding downstream 57364 19342093 ~ 19390664 (-)
zgc:158846 zgc:158846,LOC107711021,LOC107585206 coding downstream 126486 19317577 ~ 19321542 (-)
pfdn5 pfdn5,LOC107667318,LOC107711057,LOC107740577,LOC107673463 coding upstream 1132 19462391 ~ 19464546 (-)
espl1 espl1,LOC107711058,LOC107673592,LOC107740575,LOC107667390 coding upstream 4055 19465314 ~ 19477556 (-)
itgb7 itgb7,LOC107711053,LOC107673468,LOC107667391,LOC107582697,LOC107740576 coding upstream 16459 19477718 ~ 19486847 (-)
pfkmb pfkmb,LOC107673583,LOC107711051,LOC107585122,LOC107582696,LOC107748387,LOC107667407 coding upstream 25733 19486992 ~ 19501085 (-)
myl6 myl6,zgc:153867,LOC107585121,LOC105013534,LOC108440770,LOC108271738 coding upstream 85770 19547029 ~ 19551857 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding downstream 50298 19393477 ~ 19397730 (-)
G46509 NA non-coding downstream 205217 19212639 ~ 19242811 (-)
LOC122347223 NA non-coding downstream 296334 19149746 ~ 19151694 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding downstream 399192 19044628 ~ 19048836 (-)
G46476 NA non-coding downstream 404159 19043616 ~ 19043869 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding upstream 145103 19606362 ~ 19607056 (-)
G46658 NA non-coding upstream 330383 19791642 ~ 19792328 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding upstream 339984 19801243 ~ 19802266 (-)
G46673 LOC107712079,LOC107584413,LOC107673502,LOC107667352,LOC107721177,LOC107578835 non-coding upstream 372811 19834070 ~ 19838047 (-)
LOC122347207 NA non-coding upstream 416053 19877312 ~ 19880588 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 298297 19115061 ~ 19149731 (-)
G46478 NA other downstream 391897 19055146 ~ 19056131 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 730540 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 740432 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 802894 18644306 ~ 18645134 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 92058 19553317 ~ 19555942 (-)
tomm6 NA other upstream 380220 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 381785 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 438413 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 537373 19998632 ~ 20000638 (-)

Expression


Co-expression Network