ptmaa


Basic Information

Item Value
gene id ptmaa
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13854242 ~ 13857900 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242643.1
CGCCGCGCGAGCTCGCTACAGACGcttaatagtcttttttttaattatacacatCTCGTGTTtctctttatattattttgttccGAGACCCCATTATATTCTTAACACTTAGGAAAAATGGCTGACACAAAAGTCGATACCAGCTCGGAAGTCTCCGCCAAGgACCTCAAAGAAAAGAAGCAGGTTGAGGAGGCAGAAAACGGAAAGGATGCCCCTGCTAATGGAAACGCGgaaaacGAAGAGAATGGCGATCAGGAAAATGAAGTAGATGAGGAAGATGACGATGTGGCtgaagaagatgaggaagatGATGAAGgtgatgatgacgatgacgaAGATGACGAGGCTGAGGGCGGCGCGGGAAAAAGAGCGGCTGAGGATGACGATGAGGATGACGTCGAACCCAAGAAGCAAAAGACTGATGTGTAAGAAGCTGCTCTGCTGGAAATCTTCTCATCCCTCCTTTCCTTAACTCGTCCACCGGGGGAGGAAAAACATGGTCATCATCAAGTAGAGTCCAGCAtccgtgtacacacacacacctaactGCAGATTTTGTAGAAACAACCAAGACTTCAAAGCTCTACCTTCttacaaaatactttaaaaggaaaaatttgtttgtatttttatttacattttatatttttgtacatattGTTAGGAGGTCAGCCATTTTTGACAGTGATCTCTGGTTACCAAACGGTGCTTTGAAGTTGATGCTTCTCTATGAAATAGATCTTACTTGTGGTTCGACCATGTCATGTTATCTCAAAAgaaacttgtaaaaaaaaaaaccgagcaaaaaaaaaaaaaaagaaatggaaaattgCAGAAAaccatgaacaaaaaaaaaacattaattcaaaGCATTCCAGTAACTTTGTGTATGTACATCAGTTGTATCATACGTAGTTGGATTGTATGAGAGGGCAAGGCCAAGAGAAAagaattttcttcttttctttcttgtctATTAAATTGCTATCTATTTGTGGCCTGTTTGATGTATGTGTGAAATTTGTTGTGCGACAATAAACCGAAATTTATTTTGTGa

Function

GO:

id name namespace
GO:0046834 lipid phosphorylation biological_process
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0044715 8-oxo-dGDP phosphatase activity molecular_function
GO:0017110 nucleoside-diphosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242643.1 True 1057 mRNA 0.39 5 13854242 13857900

Neighbor

gene id symbol gene type direction distance location
phb2b phb2b,LOC107692360,LOC107591156,LOC108427714 coding upstream 30450 13820119 ~ 13823792 (+)
pde6d pde6d,LOC107590678,LOC107591155 coding upstream 34323 13813916 ~ 13819919 (+)
usp13 usp13,LOC107659032 coding upstream 131808 13697792 ~ 13722434 (+)
ndufb5 LOC107659010,LOC107709185,LOC107590679,LOC107578042 coding upstream 157453 13693377 ~ 13696789 (+)
actl6a actl6a,LOC107659031 coding upstream 163292 13684429 ~ 13690950 (+)
dlg1a dlg1,LOC107659037,LOC107738730,LOC108427717,LOC108271975 coding downstream 9977 13867877 ~ 13971903 (+)
lrrc40 lrrc40,LOC107709203,LOC107590628 coding downstream 123325 13981225 ~ 13985829 (+)
shroom2a LOC107659040,LOC107738857,LOC107591159,LOC107692366,LOC107590625 coding downstream 221728 14079628 ~ 14116522 (+)
trnag-ucc_2 NA coding downstream 223033 14080933 ~ 14081004 (+)
cldn34a cldn34,cldn34a,LOC107659013,LOC107709183,LOC107590626,LOC107692425,LOC107591192 coding downstream 259891 14117791 ~ 14121182 (+)
G45056 NA non-coding upstream 17423 13836607 ~ 13836819 (+)
G44998 LOC102783117 non-coding upstream 192145 13661812 ~ 13662097 (+)
LOC122346715 NA non-coding upstream 196476 13656192 ~ 13657766 (+)
G44997 bivm,LOC107732014,LOC107659026,LOC107548643,LOC107731835,LOC107692346 non-coding upstream 203359 13650115 ~ 13650883 (+)
LOC122346508 NA non-coding upstream 259641 13589885 ~ 13594601 (+)
G45070 NA non-coding downstream 2355 13860255 ~ 13860609 (+)
G45075 lrrc7,LOC107659039,LOC107709201 non-coding downstream 134845 13992745 ~ 13996966 (+)
G45084 LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 non-coding downstream 158535 14016435 ~ 14128344 (+)
LOC122347615 NA non-coding downstream 271447 14129347 ~ 14131078 (+)
G45112 NA non-coding downstream 356311 14214211 ~ 14215282 (+)
G44887 NA other upstream 444330 13394229 ~ 13409912 (+)
G44645 NA other upstream 744876 13108735 ~ 13109366 (+)
smx5 lsm2,LSM2,smx5 other upstream 772123 13080565 ~ 13082119 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 1048542 12765821 ~ 12805700 (+)
LOC122347491 LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 other upstream 1327285 12521773 ~ 12526957 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other downstream 114273 13972173 ~ 13980286 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 1378265 15236165 ~ 15244280 (+)
G45419 sgip1,sgip1a,LOC107739126 other downstream 1500961 15358861 ~ 15459386 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 1707081 15564981 ~ 15566668 (+)
G45894 NA other downstream 3328808 17186708 ~ 17187308 (+)

Expression


Co-expression Network