LOC122347419 (nasp,LOC107551040,LOC107725201,LOC107594614,LOC107731628)


Basic Information

Item Value
gene id LOC122347419
gene name nasp,LOC107551040,LOC107725201,LOC107594614,LOC107731628
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16272017 ~ 16277301 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242668.1
TTGTATCCGTATTTAAAGGCGCCAACAAAGACTAATTCAGGAACAGCTTCACAAACCTGCCATCTGTACTCACATCATCCAACAGCACACtacagcttattttatttaacgcAATAAAATGCCCGAGGAAACAGCAGCTGCTTCAACTGCCGAAAGCATGGAGGAAAAACCTTGCTCGTCAAGCGCTGCAGACAGCTCCGTCGATGTTTCCGAGGAAGCTAAGAAGCTCATTGGCACAGGCAACCGGCACTTGGTGATGGGTGATGTTGTGTCTGCAGTCAGTGTGTTCCAAGAGGCTTGTGCCATGCTAGCTGAAAAGTATGGAGACACGGCTGATGAATGTGGTGAAGCTTTTTTCTTGTGTGGAAAAGCCCTTCTGGAGCTTGCCAGGATGGAGAATACTGTACTTGGTAATGCTTTAGAGGGAGTCCCAGAAGAATCCTCTGAGGAGGGCGAGAAACAGAATGACTCTAAGATTGAAAGTGCAGACAACTTGGATGAGAAAACCAGAGATGAGCTTCGAGCACAGGTTTATGATGCCATGTCAGAGGACAAAAATCAGTCAGAGGTAGAAAAAGAGGAGGGGGAAGGCAAGCAGAACCAAGAGGAATTTAAGGAGAAGCAGGAGATGGTTGAAGCACCAAAAGAAGGGGATGCAGCATCAATTAAAACTGAGAAACCAACTGAAGACGAGGCGCAACCTACTGAAAATGAGGCAAAACCTGCTCAAGATGAGGAGAAACCAGCTGAAGACGAGGCAAAACCTGCTGAAAATGAGAAACCTACTGAAAAAGAGATTGAGAAATCAGGCGTGGATGAAAGTGCTACTAAAAAGGAAGAGGTCACAGTGTCAAATGGAGTAACTGAAAAGGTTGAGGAGAAAAATGGAAATGAAGAGAATGAAGAACCCATGGAAGAGGATGGAGAAGatgacgacgaagatgatgatgaggaggaggatgatgatgacgaAAATACAGAGGGTGAAACAAAAGATAAgGAAAGTGAGGAGGATGAAGTTGGAAACCTGCAGTTGGCCTGGGAGATGCTTGAGGTTGCAAAGGTGATTTACAAAAGaaaaGACAGCAAAGAAGATCAGTTAATGGCGGCACAGATTTACCTAAAACTTGGAGAAGTTGGAGCTGAATCAGgTAACTACAGCCAGGCCCTGGAGGACTTCAATGAGTGTTTAACCTTGCAGCTGAAACACCTTCCCTCTCATAGTCGTCTTCTGGCTGAGACTCATTACCAGTTGGGCACAACTTACAGCTACACAGCCCAATACAGCCAAGCCATTGAGCACTTCTCCAACTCCATCAAAGTCATTGAGAGCCGTCTTGCTATGCTTCAGGAGGTAATAGACAAGGCAGAAGGTGCAGAGGCAGCAAAGGAGGAGAAGAACGAGCTTGATGAGTTGAAACAGTTACTGCCAGAAATCGCTGAGAAGATTGAAGATGCCAAGGAGAGCCAGAGGACCGCTGGTGCAGCATCTGAGGCCATCCATCAGACCCTTGCGGGAGCATCCACTTCATCTGCGTTCCCAGCTGAAAATGGCGGCCCATCCTCATCTACTGCAAGTCAGATTTCCGTGAGGCCAGCCGATGCTGCATCTTCATCAAAATCTGCTTCTGACATTTCTCACCTTGTCCGCAAAAAGAGGAAACCAGACGAGGAGAGTCCAAAAAAGGACAGTGATGCTAAAAAGACTAAACAGGAGACCTCATTTAATGGCAGCGGTGACTCCGCCCACAACGGCAATGGAGTCCAGGAGAAAATGGAGCAGGAGCCAGCCAGTTCTTCCTCTGTGGAGACATCAGCGTGATGAACATCATCTGATTGACCACTTACCTTCCAACCAGCAGAGCATGCCTGCCTCATACTCTCCACGAACaactttttgtctttgttttgtaaataagtTCTTTTTGTCTGTCcaatttttgtataattgtagTAAACTTTCAATAAAGGATATTTGCATATGTGAA
>XM_043242669.1
CTTGTATCCGTATTTAAAGGCGCCAACAAAGACTAATTCAGGAACAGCTTCACAAACCTGCCATCTGTACTCACATCATCCAACAGCACACtacagcttattttatttaacgcAATAAAATGCCCGAGGAAACAGCAGCTGCTTCAACTGCCGAAAGCATGGAGGAAAAACCTTGCTCGTCAAGCGCTGCAGACAGCTCCGTCGATGTTTCCGAGGAAGCTAAGAAGCTCATTGGCACAGGCAACCGGCACTTGGTGATGGGTGATGTTGTGTCTGCAGTCAGTGTGTTCCAAGAGGCTTGTGCCATGCTAGCTGAAAAGTATGGAGACACGGCTGATGAATGTGGTGAAGCTTTTTTCTTGTGTGGAAAAGCCCTTCTGGAGCTTGCCAGGATGGAGAATACTGTACTTGGTAATGCTTTAGAGGGAGTCCCAGAAGAATCCTCTGAGGAGGGCGAGAAACAGAATGACTCTAAGATTGAAAGTGCAGACAACTTGGATGAGAAAACCAGAGATGAGCTTCGAGCACAGGTTTATGATGCCATGTCAGAGGACAAAAATCAGTCAGAGGTAGAAAAAGAGGAGGGGGAAGGCAAGCAGAACCAAGAGGAATTTAAGGAGAAGCAGGAGATGGTTGAAGCACCAAAAGAAGGGGATGCAGCATCAATTAAAACTGAGAAACCAACTGAAGACGAGGCGCAACCTACTGAAAATGAGGCAAAACCTGCTCAAGATGAGGAGAAACCAGCTGAAGACGAGGCAAAACCTGCTGAAAATGAGAAACCTACTGAAAAAGAGATTGAGAAATCAGGCGTGGATGAAAGTGCTACTAAAAAGGAAGAGGTCACAGTGTCAAATGGAGTAACTGAAAAGGTTGAGGAGAAAAATGGAAATGAAGAGAATGAAGAACCCATGGAAGAGGATGGAGAAGatgacgacgaagatgatgatgaggaggaggatgatgatgacgaAAATACAGAGGGTGAAACAAAAGATAAgGAAAGTGAGGAGGATGAAGTTGGAAACCTGCAGTTGGCCTGGGAGATGCTTGAGGTTGCAAAGGTGATTTACAAAAGaaaaGACAGCAAAGAAGATCAGTTAATGGCGGCACAGATTTACCTAAAACTTGGAGAAGTTGGAGCTGAATCAGgTAACTACAGCCAGGCCCTGGAGGACTTCAATGAGTGTTTAACCTTGCAGCTGAAACACCTTCCCTCTCATAGTCGTCTTCTGGCTGAGACTCATTACCAGTTGGGCACAACTTACAGCTACACAGCCCAATACAGCCAAGCCATTGAGCACTTCTCCAACTCCATCAAAGTCATTGAGAGCCGTCTTGCTATGCTTCAGGAGGTAATAGACAAGGCAGAAGGTGCAGAGGCAGCAAAGGAGGAGAAGAACGAGCTTGATGAGTTGAAACAGTTACTGCCAGAAATCGCTGAGAAGATTGAAGATGCCAAGGAGAGCCAGAGGACCGCTGGTGCAGCATCTGAGGCCATCCATCAGACCCTTGCGGGAGCATCCACTTCATCTGCGTTCCCAGCTGAAAATGGCGGCCCATCCTCATCTACTGCAAGTCAGATTTCCGTGAGGCCAGCCGATGCTGCATCTTCATCAAAATCTGCTTCTGACATTTCTCACCTTGTCCGCAAAAAGCCAGCCAGTTCTTCCTCTGTGGAGACATCAGCGTGATGAACATCATCTGATTGACCACTTACCTTCCAACCAGCAGAGCATGCCTGCCTCATACTCTCCACGAACaactttttgtctttgttttgtaaataagtTCTTTTTGTCTGTCcaatttttgtataattgtagTAAACTTTCAATAAAGGATATTTGCATATGTGAA
>XM_043242670.1
TTGTATCCGTATTTAAAGGCGCCAACAAAGACTAATTCAGGAACAGCTTCACAAACCTGCCATCTGTACTCACATCATCCAACAGCACACtacagcttattttatttaacgcAATAAAATGCCCGAGGAAACAGCAGCTGCTTCAACTGCCGAAAGCATGGAGGAAAAACCTTGCTCGTCAAGCGCTGCAGACAGCTCCGTCGATGTTTCCGAGGAAGCTAAGAAGCTCATTGGCACAGGCAACCGGCACTTGGTGATGGGTGATGTTGTGTCTGCAGTCAGTGTGTTCCAAGAGGCTTGTGCCATGCTAGCTGAAAAGTATGGAGACACGGCTGATGAATGTGGTGAAGCTTTTTTCTTGTGTGGAAAAGCCCTTCTGGAGCTTGCCAGGATGGAGAATACTGTACTTGGTAATGCTTTAGAGGGAGTCCCAGAAGAATCCTCTGAGGAGGGCGAGAAACAGAATGACTCTAAGATTGAAAGTGCAGACAACTTGGATGatgacgacgaagatgatgatgaggaggaggatgatgatgacgaAAATACAGAGGGTGAAACAAAAGATAAgGAAAGTGAGGAGGATGAAGTTGGAAACCTGCAGTTGGCCTGGGAGATGCTTGAGGTTGCAAAGGTGATTTACAAAAGaaaaGACAGCAAAGAAGATCAGTTAATGGCGGCACAGATTTACCTAAAACTTGGAGAAGTTGGAGCTGAATCAGgTAACTACAGCCAGGCCCTGGAGGACTTCAATGAGTGTTTAACCTTGCAGCTGAAACACCTTCCCTCTCATAGTCGTCTTCTGGCTGAGACTCATTACCAGTTGGGCACAACTTACAGCTACACAGCCCAATACAGCCAAGCCATTGAGCACTTCTCCAACTCCATCAAAGTCATTGAGAGCCGTCTTGCTATGCTTCAGGAGGTAATAGACAAGGCAGAAGGTGCAGAGGCAGCAAAGGAGGAGAAGAACGAGCTTGATGAGTTGAAACAGTTACTGCCAGAAATCGCTGAGAAGATTGAAGATGCCAAGGAGAGCCAGAGGACCGCTGGTGCAGCATCTGAGGCCATCCATCAGACCCTTGCGGGAGCATCCACTTCATCTGCGTTCCCAGCTGAAAATGGCGGCCCATCCTCATCTACTGCAAGTCAGATTTCCGTGAGGCCAGCCGATGCTGCATCTTCATCAAAATCTGCTTCTGACATTTCTCACCTTGTCCGCAAAAAGAGGAAACCAGACGAGGAGAGTCCAAAAAAGGACAGTGATGCTAAAAAGACTAAACAGGAGACCTCATTTAATGGCAGCGGTGACTCCGCCCACAACGGCAATGGAGTCCAGGAGAAAATGGAGCAGGAGCCAGCCAGTTCTTCCTCTGTGGAGACATCAGCGTGATGAACATCATCTGATTGACCACTTACCTTCCAACCAGCAGAGCATGCCTGCCTCATACTCTCCACGAACaactttttgtctttgttttgtaaataagtTCTTTTTGTCTGTCcaatttttgtataattgtagTAAACTTTCAATAAAGGATATTTGCATATGTGAA

Function

symbol description
nasp Predicted to enable histone binding activity. Predicted to be involved in CENP-A containing nucleosome assembly and DNA replication-dependent nucleosome assembly. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Is expressed in several structures, including eye; immature eye; pectoral fin; pharyngeal arch; and ventricular zone. Orthologous to human NASP (nuclear autoantigenic sperm protein).

NR:

description
PREDICTED: histone-binding protein N1/N2-like isoform X1

GO: NA

KEGG:

id description
K11291 NASP; nuclear autoantigenic sperm protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242668.1 True 1988 mRNA 0.46 15 16272017 16277300
XM_043242669.1 False 1860 mRNA 0.46 14 16272017 16277301
XM_043242670.1 False 1559 mRNA 0.47 14 16272017 16277300

Neighbor

gene id symbol gene type direction distance location
tmem69 tmem69,LOC107731626,LOC107684288,LOC107725194,LOC107594642,LOC107692399,LOC107579605 coding downstream 15937 16254641 ~ 16256080 (-)
mast2 mast2,LOC107717134,LOC107692432 coding downstream 18177 16152146 ~ 16253840 (-)
LOC122347277 endou coding downstream 576483 15691262 ~ 15695534 (-)
LOC122346598 LOC107673517,LOC107711045,LOC107580698 coding downstream 668569 15601432 ~ 15603448 (-)
LOC122346414 uroc1 coding downstream 671171 15594363 ~ 15600846 (-)
akr1a1b akr1a1,akr1a1b,LOC107725198,LOC107692407,LOC107731642,LOC107684038 coding upstream 556 16277857 ~ 16280917 (-)
prpf38a prpf38a,LOC107731643,LOC107725199,LOC107692408,LOC107684051 coding upstream 4088 16281389 ~ 16284146 (-)
mpl mpl,LOC107725197,LOC107594610,LOC107551019,LOC107725192 coding upstream 14894 16292195 ~ 16298925 (-)
tie1 tie1,LOC107731644,LOC107684058,LOC107725190 coding upstream 22278 16299579 ~ 16311653 (-)
LOC122347428 tmem125,LOC107725195,LOC107684333,LOC107551025,LOC107594640 coding upstream 63004 16340305 ~ 16350269 (-)
G45753 NA non-coding downstream 909 16270902 ~ 16271108 (-)
G45752 NA non-coding downstream 2625 16268915 ~ 16269392 (-)
G45751 NA non-coding downstream 4475 16267183 ~ 16267542 (-)
G45709 NA non-coding downstream 153431 15902216 ~ 16118586 (-)
LOC122347156 NA non-coding downstream 394550 15843131 ~ 15877467 (-)
G45770 NA non-coding upstream 43112 16320413 ~ 16322805 (-)
G45897 NA non-coding upstream 910155 17187456 ~ 17187794 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding upstream 1237337 17514638 ~ 17518605 (-)
G45993 NA non-coding upstream 1530320 17807621 ~ 17808115 (-)
G46000 NA non-coding upstream 1545235 17822536 ~ 17822735 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other downstream 211551 16059893 ~ 16060466 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other downstream 212250 16058968 ~ 16059767 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 506910 15756309 ~ 15765107 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other downstream 586532 15535386 ~ 15685485 (-)
fam183a fam183a,LOC107551015 other upstream 83866 16361167 ~ 16364020 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 539339 16816640 ~ 16830261 (-)
G45895 NA other upstream 909388 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 958489 17235790 ~ 17246386 (-)
G45910 NA other upstream 1030514 17307815 ~ 17308478 (-)

Expression


Co-expression Network