akr1a1b (akr1a1,akr1a1b,LOC107725198,LOC107692407,LOC107731642,LOC107684038)


Basic Information

Item Value
gene id akr1a1b
gene name akr1a1,akr1a1b,LOC107725198,LOC107692407,LOC107731642,LOC107684038
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16277857 ~ 16280917 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242787.1
CCTGACCTAGGAAAAATATTCCTTGTTATGATAATCCACACGGGACACTGGTTGTCCTGATTTTAAAGGGAGAATGCAGCACATTCAACGCGCTCTGCGTCTTGTCATTCATTCTCACAAGTTTTGCTGTCGAATGACACACAGGATGAGTATGAATGATTTTGCTGTTCTCAGCACTGGAAGAAAGATGCCCCTTGTGGGACTTGGGACGTGGAAGAGTGAACCCGGACAGGTAAAACAGGCAGTTATCTGGGCGCTGCAATCTGGCTATCGGCACATTGACTGTGCTCCCATTTATGGGAACGAGCCAGAGATCGGTGAAGCATTTCAGGAAATTATGGGACCTGAAAAAGGCGTAAGGCGAGAGGATGTATTTGTGACCTCCAAactgtggaacacaaaacacCACCCAGATGATGTGGAACCATCTCTCTTAAAGACTTTGAAAGATTTGAAGCTGGAGTACTTAGACCTTTACCTCATCCATTGGCCATATGCCTTCCAACGAGGCGATACCCCTTTCCCTAGGAAGGAGGACGGAACTTTGCTGTATGACAACATGGACTACAAGCTGACATGGGCTGCTATGGAAAAACTTGTGGGAAAGGGGCTTGTCAGGGCCATCGGGCTCTCGAACTTCAATAGCAGGCAGATCGATGACATCTTGTCAATTGCAAGCATCAAACCAACTGTTTTGCAGGTGGAGTCCCATCCATACCTTGCACAGGTTGAGCTGTTGGCTCACTGCCGGGATCGGGGTTTGGTAATGACCGCCTACAGTCCGCTGGGATCTCCTGACCGAGCCTGGAAGCATCCAGAGGAGCCTGTGCTCTTAGAAGAACCAGCCATTGCTGCACTAGCCAAGAAATACAACAAGAGTCCTGCACAAATTATCATCAGGTGGCAAACTCAAAGAGGAGTAGTGACTATCCCAAAGAGCATTACACAGTCTCGGATCAAAGAGAACATCCAGGTGTTTGATTTCACTCTTGAACCCGAGGAGATAAATCAAGTGACAGCATTGCACCGAGGCTGGCGTTACATTGTGCCATCCATTACTGTTGATGGTAAGTCTGTCCCCCGGGATGCAGGACATCCTCACTACCCTTTTAATGACCCCTATTAATACACACTTCTGCGTGATTCTGTGCCTTGGAACTAATTGAACCCACGGAGCCCGTTCATTACTCTGTATACTtctaacataataaaacatttttgttaaatattgaaa
>XM_043242788.1
tttattttgacggatGTTTTCAGAGAACAGCCAACAGGAAGTAGATGCGTCATGCTATGCGAAAATATTCCAATAAGTTTTAATCAACCCGGATAGTTATATAGTGGAGAAAATCTTTGACTTATTAATACACTACACACAGGATGAGTATGAATGATTTTGCTGTTCTCAGCACTGGAAGAAAGATGCCCCTTGTGGGACTTGGGACGTGGAAGAGTGAACCCGGACAGGTAAAACAGGCAGTTATCTGGGCGCTGCAATCTGGCTATCGGCACATTGACTGTGCTCCCATTTATGGGAACGAGCCAGAGATCGGTGAAGCATTTCAGGAAATTATGGGACCTGAAAAAGGCGTAAGGCGAGAGGATGTATTTGTGACCTCCAAactgtggaacacaaaacacCACCCAGATGATGTGGAACCATCTCTCTTAAAGACTTTGAAAGATTTGAAGCTGGAGTACTTAGACCTTTACCTCATCCATTGGCCATATGCCTTCCAACGAGGCGATACCCCTTTCCCTAGGAAGGAGGACGGAACTTTGCTGTATGACAACATGGACTACAAGCTGACATGGGCTGCTATGGAAAAACTTGTGGGAAAGGGGCTTGTCAGGGCCATCGGGCTCTCGAACTTCAATAGCAGGCAGATCGATGACATCTTGTCAATTGCAAGCATCAAACCAACTGTTTTGCAGGTGGAGTCCCATCCATACCTTGCACAGGTTGAGCTGTTGGCTCACTGCCGGGATCGGGGTTTGGTAATGACCGCCTACAGTCCGCTGGGATCTCCTGACCGAGCCTGGAAGCATCCAGAGGAGCCTGTGCTCTTAGAAGAACCAGCCATTGCTGCACTAGCCAAGAAATACAACAAGAGTCCTGCACAAATTATCATCAGGTGGCAAACTCAAAGAGGAGTAGTGACTATCCCAAAGAGCATTACACAGTCTCGGATCAAAGAGAACATCCAGGTGTTTGATTTCACTCTTGAACCCGAGGAGATAAATCAAGTGACAGCATTGCACCGAGGCTGGCGTTACATTGTGCCATCCATTACTGTTGATGGTAAGTCTGTCCCCCGGGATGCAGGACATCCTCACTACCCTTTTAATGACCCCTATTAATACACACTTCTGCGTGATTCTGTGCCTTGGAACTAATTGAACCCACGGAGCCCGTTCATTACTCTGTATACTtctaacataataaaacatttttgttaaatattgaaa
>XM_043242790.1
tgcaTCCTGCTGGATCTGCTGTGGAAGTCAGCTGATAAGTCAGCAGGTTACACTTCCTTTCGTTTGCTCCTGAATTTGAGCTTTGAACAGTTTGCATTCACTGCGCCTCCTGCAACCTTTCCACACACAGGATGAGTATGAATGATTTTGCTGTTCTCAGCACTGGAAGAAAGATGCCCCTTGTGGGACTTGGGACGTGGAAGAGTGAACCCGGACAGGTAAAACAGGCAGTTATCTGGGCGCTGCAATCTGGCTATCGGCACATTGACTGTGCTCCCATTTATGGGAACGAGCCAGAGATCGGTGAAGCATTTCAGGAAATTATGGGACCTGAAAAAGGCGTAAGGCGAGAGGATGTATTTGTGACCTCCAAactgtggaacacaaaacacCACCCAGATGATGTGGAACCATCTCTCTTAAAGACTTTGAAAGATTTGAAGCTGGAGTACTTAGACCTTTACCTCATCCATTGGCCATATGCCTTCCAACGAGGCGATACCCCTTTCCCTAGGAAGGAGGACGGAACTTTGCTGTATGACAACATGGACTACAAGCTGACATGGGCTGCTATGGAAAAACTTGTGGGAAAGGGGCTTGTCAGGGCCATCGGGCTCTCGAACTTCAATAGCAGGCAGATCGATGACATCTTGTCAATTGCAAGCATCAAACCAACTGTTTTGCAGGTGGAGTCCCATCCATACCTTGCACAGGTTGAGCTGTTGGCTCACTGCCGGGATCGGGGTTTGGTAATGACCGCCTACAGTCCGCTGGGATCTCCTGACCGAGCCTGGAAGCATCCAGAGGAGCCTGTGCTCTTAGAAGAACCAGCCATTGCTGCACTAGCCAAGAAATACAACAAGAGTCCTGCACAAATTATCATCAGGTGGCAAACTCAAAGAGGAGTAGTGACTATCCCAAAGAGCATTACACAGTCTCGGATCAAAGAGAACATCCAGGTGTTTGATTTCACTCTTGAACCCGAGGAGATAAATCAAGTGACAGCATTGCACCGAGGCTGGCGTTACATTGTGCCATCCATTACTGTTGATGGTAAGTCTGTCCCCCGGGATGCAGGACATCCTCACTACCCTTTTAATGACCCCTATTAATACACACTTCTGCGTGATTCTGTGCCTTGGAACTAATTGAACCCACGGAGCCCGTTCATTACTCTGTATACTtctaacataataaaacatttttgttaaatattgaaa

Function

symbol description
akr1a1b Predicted to enable alditol:NADP+ 1-oxidoreductase activity. Predicted to be involved in cellular detoxification of aldehyde. Predicted to be located in apical plasma membrane. Predicted to be active in cytosol. Orthologous to human AKR1A1 (aldo-keto reductase family 1 member A1).
akr1a1 Enables L-glucuronate reductase activity and glucuronolactone reductase activity. Involved in daunorubicin metabolic process and doxorubicin metabolic process. Located in extracellular exosome. Biomarker of breast cancer and lung adenocarcinoma.

NR:

description
PREDICTED: alcohol dehydrogenase [NADP(+)] isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0047939 L-glucuronate reductase activity molecular_function
GO:0004032 alditol molecular_function
GO:0008106 alcohol dehydrogenase (NADP+) activity molecular_function

KEGG:

id description
K00002 AKR1A1, adh; alcohol dehydrogenase (NADP+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242787.1 True 1234 mRNA 0.47 9 16277857 16280752
XM_043242788.1 False 1232 mRNA 0.46 9 16277857 16280917
XM_043242790.1 False 1220 mRNA 0.47 9 16277857 16280369

Neighbor

gene id symbol gene type direction distance location
LOC122347419 nasp,LOC107551040,LOC107725201,LOC107594614,LOC107731628 coding downstream 556 16272017 ~ 16277301 (-)
tmem69 tmem69,LOC107731626,LOC107684288,LOC107725194,LOC107594642,LOC107692399,LOC107579605 coding downstream 21777 16254641 ~ 16256080 (-)
mast2 mast2,LOC107717134,LOC107692432 coding downstream 24017 16152146 ~ 16253840 (-)
LOC122347277 endou coding downstream 582323 15691262 ~ 15695534 (-)
LOC122346598 LOC107673517,LOC107711045,LOC107580698 coding downstream 674409 15601432 ~ 15603448 (-)
prpf38a prpf38a,LOC107731643,LOC107725199,LOC107692408,LOC107684051 coding upstream 472 16281389 ~ 16284146 (-)
mpl mpl,LOC107725197,LOC107594610,LOC107551019,LOC107725192 coding upstream 11278 16292195 ~ 16298925 (-)
tie1 tie1,LOC107731644,LOC107684058,LOC107725190 coding upstream 18662 16299579 ~ 16311653 (-)
LOC122347428 tmem125,LOC107725195,LOC107684333,LOC107551025,LOC107594640 coding upstream 59388 16340305 ~ 16350269 (-)
dmrt2b dmrt2b,LOC107684342,LOC107551024,LOC107692445 coding upstream 103419 16384336 ~ 16388414 (-)
G45753 NA non-coding downstream 6749 16270902 ~ 16271108 (-)
G45752 NA non-coding downstream 8465 16268915 ~ 16269392 (-)
G45751 NA non-coding downstream 10315 16267183 ~ 16267542 (-)
G45709 NA non-coding downstream 159271 15902216 ~ 16118586 (-)
LOC122347156 NA non-coding downstream 400390 15843131 ~ 15877467 (-)
G45770 NA non-coding upstream 39496 16320413 ~ 16322805 (-)
G45897 NA non-coding upstream 906539 17187456 ~ 17187794 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding upstream 1233721 17514638 ~ 17518605 (-)
G45993 NA non-coding upstream 1526704 17807621 ~ 17808115 (-)
G46000 NA non-coding upstream 1541619 17822536 ~ 17822735 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other downstream 217391 16059893 ~ 16060466 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other downstream 218090 16058968 ~ 16059767 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 512750 15756309 ~ 15765107 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other downstream 592372 15535386 ~ 15685485 (-)
fam183a fam183a,LOC107551015 other upstream 80250 16361167 ~ 16364020 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 535723 16816640 ~ 16830261 (-)
G45895 NA other upstream 905772 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 954873 17235790 ~ 17246386 (-)
G45910 NA other upstream 1026898 17307815 ~ 17308478 (-)

Expression


Co-expression Network