tie1 (tie1,LOC107731644,LOC107684058,LOC107725190)


Basic Information

Item Value
gene id tie1
gene name tie1,LOC107731644,LOC107684058,LOC107725190
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16299579 ~ 16311653 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242792.1
TTGAGTGTGGATCAAGCGGAGTTGGGTTTTCTGCGTGTCAACAGCACCGATTTCCACGCGCAGAGGGAATCAGTGCGCGTGCATTCCTTCACGGTGATTGTAGAAATGCGCAAAAACTCGCGGCGACGGCGGTCGAGCTGGAAAAGCCCACTGGAATGACAACTCCTGTGTTTGGATCATTTCTAACGGATTACCCGAAAGTGAACATAAGATAACAGCCATGCTGCATTTACTATGCCTCTTGTGCTTCGTGGGCATATCTGATGCAGTCACGGATCTCACAATGACCTCTAATGGTGCCACATCTGCTAGTCATTTCCGCCTCTCTTGTATTTCTGGAGAGCGTGATACAGACGGAATTCAGCTGAGCATCACGAAGGACAACAGCATTGTCCTTCGTGCAGATTCGCCACATTTTAATGTGGAGACGCCACAGACTAAAGAAGTGGTGGCTACTGGATTCACAGGCTTTGACCACAGTGGGATTTTCTACTGTCACTCAAAAAGAGGCTCTGACCAACCTGCCAACATTACACTCATTAACAACTTCAGCAAAGgtAAATTTAAACCAGTGAGAGTCACTATGACAGCCAGTAAAGGAGAAGAAGTGAAACTAATCATGGATGTAGTTGGGGCAGAAAGACGAGACATTCATTGGAAATTCAATGGTAACTACCACTACATGACTCCTATTGCTGATGTTCAAAACCACACAGTAGTTCTGGATCTGATGAAAGTTGATGAAAGCCATACAGGAATTTACAGTGTCAGCTATATTGGGGAAAGTGCTCTTTATAGTGCCTGGATCCGCCTCATCGTTCGTGAATGTCCAAAGAATATATGGGGCTCCGACTGTGACAAAGACTGTCCCGAATGCTTGAATGGAGGTGTGTGCCATGACAAAGATGGAGACTGCGTTTGCCCTCCGGGGTTTATGGGAATGCGCTGTGAGACAGCCTGTCGAGAAGGAATGTTTGGTAGGAACTGCCAGGAATCCTGTAAGTCTGAGAATGGATGCCAGGGTTTGAGTTTCTGTCTCACGGATCCTTACGGCTGTTCTTGTGCAAGCGGCTGGCATGGAGATCGCTGTCGTAAACccTGTCTTGAAGGAATGTACGGCGCTGACTGTCTTTTAAGTtgcaactgcaaaaacaaaggcaaatGCAATCGATTCAGTGGCTGCCAATGTCCTACAGGCTGGAGAGGGCAATACTGTGAGAAATCAGATCGTGCACCAGAGATTTTGGACATGCCCAGTAACCTGGAGGGAAACTTGAACTCCAGCCACAAGATCACATGTTCTGCAACAGGCCATCCTCTGCCTAGCCATATGAGTATTGAGCTACGCAAACTGGAAAGCACCATTTTTAAGGCATCCCACACTACCACGGACTCCAAAAAAAGCACAGCTCACTTTGAGATCCCAAGGCTGTCTGCAGAGCACAATGGTTTGTGGGAATGTCGAGTCTCCACCAATGGTGGGCAGGATTCCTTCAAGTTTATCCTAACAGTGAAAGATCCACCCTACCCAGCCACTGCTCCTAAACTAATATCGAGGAGTAGCAAACAACTAGTTGTAAAGCCTGTGGACACTTATATGGGTGACGGTCCCATTGTTTCAACTAAGCTACTTTACAAGCCAGTGAATACAGAAGACTCCTGGTCCTCCATTATAGtgtatgGCAGCGATCAAATTACATTACCGAATTTGAAGCCTTCAACCAGATACCATGTCCGTGTACAACTCACTCGCCCAGGGGACGGAGGAGAAGGTCCTTTGGGTCCAAAGGCAATCATGGAGACTGACTGCCCAGGTCCTTCTTCTCCAAGGAACGTCCAGGCACATGCTCTGTCCATCAGTGCAGTTAGGCTTCAATGGCAACCGCCTGAGGACCCCAATGGAGGCATTGTAAAGTACAGCATTGAATACCAGCCAGTGGGCCAGAGCAGCTTTCACCCTTGGGTGGACACAGATGATGGCAACAAAACCACAAAAGATGTGACATCCCTTAATGTGAGCACATCATACCTGTTCAGAGTGAGGGCTTTCTCCAAGGTGCCAGGAGAGTGGAGCAAGTTTGTAGAAGCCAGGACACGTGGAGACGGATTCTCCAACTATATTCCCACCACCCAGCAAGTTGGAAGGCCAATAGCTGAGGATCATCAGCTTCTTTGGGCTGTGGTTGGGTCAGTGGCTGTAACCTGTGTGACCATTCTTCTGGCCCTTTTGATTCTCTTCTACATTCGTAAATCTGTCCTTAAACGAAAGCGGACATTCACCTATCAGTCTGGATCGGTGAGtagacactttattttgTCTCACAACTCAGGGACTCTCACACTGACCCGGCGACCAAAACCTTCCCCAGAGCCCCTCACCTATCCCATACTGGAGTGGGAGGACATTAAGTTTGAGGATGTCATTGGAGAAGGAAACTTTGGTCAGGTCATCAAGGCCATGGTCAAAAAAGATGGCATAAAAATGAGTGCTGCGATTAAAATGCTTAAGGAGTTCGCCTCAGAGAATGACCATCGAGACTTTGCAGGCGAATTAGAAGTGCTGTGTAAATTGGGCCAGCATCCGAACATAATTAATCTAATCGGTGCCTGTGAAAACAGAGGTTACCTTTACATTGCCATTGAATATGCACCTTACGGAAACCTTTTGGACTTCCTAAGAAAGAGCCGTGTCCTAGAGACTGATCCTGCTTTTGCTAAAGAGCACGGAACGGCCTCCACACTCACCTCCCAGCAGCTCTTGCAGTTTGCTGCTGATGTAGCAACTGGCATGCATTACCTTAGTGACAAACAGTTCATCCACAGAGATTTGGCAGCCAGAAATGTACTCGTGGGAGACAACCTAGCTGCTAAAATTGCAGATTTTGGCCTCTCACGTGGGGAGGAGGTGTACGTGAAAAAGACCATGGGAAGACTGCCTGTGCGATGGATGGCCATAGAGTCACTAAACTACAGTGTCTACACCACTAAGAGTGATGTgtgGTCTTTTGGAGTTCTTCTGTGGGAAATTGTAAGTTTAGGTGGGACTCCATACTGTGGGATGACCTGTGCTGAGCTCTATGAGAAGCTTCCTCAGGGCTATAGAATGGAGCAGCCCAGGAACTGTGACGATGAAGTGTATGAACTTATGAGGCAGTGCTGGCGAGATAGACCCTATGAGCGACCGCCATTTTCACAAATATCCGTCCAGCTCAATAGGATGCAAGAGGCACGGAAGGCCTATGTCAACATGGCTCTGTTTGAGAACTTCACTTATGCTGGAATAGATGCTACAGCTGAAGAGGCCTGACTACCAGCCCCCCCAGACCCAAGAAGGCTTCATAACCCAAGGGAGGCTCATCACAGTAAAGCTTTACGCTACTGTCACTCCCCTGTGGTCAGGTTCCATTGTTCAAAGAAACACTCCACCAAAACCACATGGCTATAGAGTACAGACTGTGAAAGGACACTCTTATGAGCTGTTATGACTCTCGATTCTAGAAGGATTCATATCTCAGGATGTTGGATTACTCAAGAGGAAATGGAACCTACAATATAAGCTACAGATGTGTAGCACACTGGGTCTGTGGGGAGCTGGACAATGCACTGAACTTCTTTTCCATCTTTTATTGGGAGAATCTTTGTGTGAGGTTGTTAAAACTTGCATTCATCAAAtgaaaaatggaagaaaaaaaactgccagTATTATTCAATGTAGCACTTGAAAAAAGCGATGTATCGTTCTCATTGAAACTCATTTGTTTGGCTTGAGTGAGTTCTGTACataatgttaatgttgtttATCTGACCGTAAAAAGCCACTAagatcttgttttttgttttttacatatatgtCATGTTATAGCCGTCCTGTAATCATTATAAGTATGTTAAGAAGAACGTCTTTacttaaataaaacatctaagTGGTAA

Function

symbol description
tie1 Predicted to enable transmembrane receptor protein tyrosine kinase activity. Acts upstream of or within blood vessel development; endothelial cell-cell adhesion; and heart development. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be integral component of plasma membrane. Is expressed in several structures, including angioblastic mesenchymal cell; cardiovascular system; intermediate cell mass of mesoderm; pharyngeal arch; and ventral mesoderm. Human ortholog(s) of this gene implicated in hereditary lymphedema. Orthologous to human TIE1 (tyrosine kinase with immunoglobulin like and EGF like domains 1).

NR:

description
PREDICTED: tyrosine-protein kinase receptor Tie-1 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242792.1 True 3930 mRNA 0.46 22 16299579 16311653

Neighbor

gene id symbol gene type direction distance location
mpl mpl,LOC107725197,LOC107594610,LOC107551019,LOC107725192 coding downstream 654 16292195 ~ 16298925 (-)
prpf38a prpf38a,LOC107731643,LOC107725199,LOC107692408,LOC107684051 coding downstream 15433 16281389 ~ 16284146 (-)
akr1a1b akr1a1,akr1a1b,LOC107725198,LOC107692407,LOC107731642,LOC107684038 coding downstream 18662 16277857 ~ 16280917 (-)
LOC122347419 nasp,LOC107551040,LOC107725201,LOC107594614,LOC107731628 coding downstream 22278 16272017 ~ 16277301 (-)
tmem69 tmem69,LOC107731626,LOC107684288,LOC107725194,LOC107594642,LOC107692399,LOC107579605 coding downstream 43499 16254641 ~ 16256080 (-)
LOC122347428 tmem125,LOC107725195,LOC107684333,LOC107551025,LOC107594640 coding upstream 28652 16340305 ~ 16350269 (-)
dmrt2b dmrt2b,LOC107684342,LOC107551024,LOC107692445 coding upstream 72683 16384336 ~ 16388414 (-)
mier1a mier1,LOC107758364,LOC107724131,LOC107684256,LOC107551013,LOC107692413 coding upstream 252297 16563950 ~ 16570461 (-)
slc35d1a slc35d1a,LOC107724140,LOC107551012,LOC107684099,LOC107758361,LOC107594604,LOC107692433,LOC108441641 coding upstream 259491 16571144 ~ 16578063 (-)
serbp1a LOC107594603,LOC107692416,LOC107758366,LOC107724138 coding upstream 291642 16603295 ~ 16609663 (-)
G45753 NA non-coding downstream 28471 16270902 ~ 16271108 (-)
G45752 NA non-coding downstream 30187 16268915 ~ 16269392 (-)
G45751 NA non-coding downstream 32037 16267183 ~ 16267542 (-)
G45709 NA non-coding downstream 180993 15902216 ~ 16118586 (-)
LOC122347156 NA non-coding downstream 422112 15843131 ~ 15877467 (-)
G45770 NA non-coding upstream 8760 16320413 ~ 16322805 (-)
G45897 NA non-coding upstream 875803 17187456 ~ 17187794 (-)
G45930 LOC107582740,LOC107685313,LOC107722678 non-coding upstream 1202985 17514638 ~ 17518605 (-)
G45993 NA non-coding upstream 1495968 17807621 ~ 17808115 (-)
G46000 NA non-coding upstream 1510883 17822536 ~ 17822735 (-)
G45731 LOC107692397,LOC107556985,LOC107717145,LOC106584012 other downstream 239113 16059893 ~ 16060466 (-)
G45730 pik3r3,LOC107692397,LOC107717145,LOC107675943 other downstream 239812 16058968 ~ 16059767 (-)
LOC122347279 LOC107556984,LOC107731622,LOC107692431,LOC107675940,LOC107594634,LOC107717133 other downstream 534472 15756309 ~ 15765107 (-)
LOC122346545 LOC107582692,LOC107673508,LOC107711046 other downstream 614094 15535386 ~ 15685485 (-)
fam183a fam183a,LOC107551015 other upstream 49514 16361167 ~ 16364020 (-)
rgs8 rgs8,LOC107711118,LOC107551030,LOC107732448,LOC107564081,LOC108441527 other upstream 504987 16816640 ~ 16830261 (-)
G45895 NA other upstream 875036 17186689 ~ 17187318 (-)
LOC122347244 nos1apb,LOC107715504,LOC107560777,LOC107701337,LOC107593855 other upstream 924137 17235790 ~ 17246386 (-)
G45910 NA other upstream 996162 17307815 ~ 17308478 (-)

Expression


Co-expression Network