Gene
RNA
| Item | Value |
|---|---|
| gene id | dlg1a |
| gene name | dlg1,LOC107659037,LOC107738730,LOC108427717,LOC108271975 |
| gene type | coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056704.1 |
| NCBI id | CM032073.1 |
| chromosome length | 27473687 |
| location | 13867877 ~ 13971903 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| symbol | description |
|---|---|
| dlg1 | Enables several functions, including L27 domain binding activity; enzyme binding activity; and protein C-terminus binding activity. Involved in several processes, including bicellular tight junction assembly; cytoskeleton organization; and negative regulation of MAPK cascade. Located in several cellular components, including basolateral plasma membrane; bicellular tight junction; and immunological synapse. Part of MPP7-DLG1-LIN7 complex. Implicated in invasive ductal carcinoma. Biomarker of cervix uteri carcinoma in situ. |
| description |
|---|
| PREDICTED: disks large homolog 1-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0007015 | actin filament organization | biological_process |
| GO:0030866 | cortical actin cytoskeleton organization | biological_process |
| GO:0045930 | negative regulation of mitotic cell cycle | biological_process |
| GO:0001935 | endothelial cell proliferation | biological_process |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0016323 | basolateral plasma membrane | cellular_component |
| GO:0019901 | protein kinase binding | molecular_function |
| GO:0019902 | phosphatase binding | molecular_function |
| id | description |
|---|---|
| K12076 | DLG1; disks large protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_043242793.1 | True | 5193 | mRNA | 0.46 | 26 | 13867877 | 13971903 |
| XM_043242794.1 | False | 5190 | mRNA | 0.46 | 26 | 13867877 | 13971903 |
| XM_043242795.1 | False | 5190 | mRNA | 0.46 | 26 | 13867877 | 13971903 |
| XM_043242796.1 | False | 5187 | mRNA | 0.46 | 26 | 13867877 | 13971903 |
| XM_043242797.1 | False | 5181 | mRNA | 0.46 | 26 | 13867877 | 13971903 |
| XM_043242798.1 | False | 5117 | mRNA | 0.46 | 26 | 13867878 | 13971903 |
| XM_043242799.1 | False | 5094 | mRNA | 0.46 | 25 | 13867877 | 13971903 |
| XM_043242800.1 | False | 5085 | mRNA | 0.46 | 25 | 13867877 | 13971903 |
| XM_043242801.1 | False | 5082 | mRNA | 0.46 | 25 | 13867877 | 13971903 |
| XM_043242802.1 | False | 5082 | mRNA | 0.46 | 25 | 13867877 | 13971903 |
| XM_043242804.1 | False | 5076 | mRNA | 0.46 | 25 | 13867877 | 13971903 |
| XM_043242805.1 | False | 5073 | mRNA | 0.46 | 25 | 13867877 | 13971903 |
| XM_043242806.1 | False | 5069 | mRNA | 0.46 | 25 | 13867878 | 13971903 |
| XM_043242807.1 | False | 4610 | mRNA | 0.46 | 22 | 13931872 | 13971903 |
| XM_043242808.1 | False | 4997 | mRNA | 0.46 | 25 | 13867878 | 13971903 |
| XM_043242809.1 | False | 4985 | mRNA | 0.45 | 24 | 13867878 | 13971903 |
| XM_043242810.1 | False | 4973 | mRNA | 0.45 | 24 | 13867878 | 13971903 |
| XM_043242811.1 | False | 4970 | mRNA | 0.45 | 24 | 13867878 | 13971903 |
| XM_043242812.1 | False | 4921 | mRNA | 0.46 | 24 | 13894290 | 13971903 |
| XM_043242813.1 | False | 4509 | mRNA | 0.45 | 21 | 13931874 | 13971903 |
| XM_043242815.1 | False | 4497 | mRNA | 0.45 | 21 | 13931874 | 13971903 |
| XM_043242816.1 | False | 4897 | mRNA | 0.45 | 24 | 13867879 | 13971903 |
| XM_043242817.1 | False | 4542 | mRNA | 0.46 | 24 | 13873288 | 13971903 |
| XM_043242818.1 | False | 4855 | mRNA | 0.45 | 23 | 13867879 | 13971903 |
| XM_043242819.1 | False | 5136 | mRNA | 0.46 | 22 | 13922934 | 13971903 |
| XM_043242820.1 | False | 4701 | mRNA | 0.46 | 22 | 13894291 | 13971903 |
| XM_043242821.1 | False | 5036 | mRNA | 0.46 | 21 | 13922935 | 13971903 |
| XM_043242822.1 | False | 5024 | mRNA | 0.46 | 21 | 13922935 | 13971903 |
| XM_043242823.1 | False | 4139 | mRNA | 0.44 | 21 | 13938037 | 13971903 |
| XM_043242824.1 | False | 3963 | mRNA | 0.44 | 21 | 13938201 | 13971903 |
| XM_043242825.1 | False | 3146 | mRNA | 0.43 | 12 | 13955856 | 13971903 |
| XM_043242826.1 | False | 3151 | mRNA | 0.43 | 12 | 13955855 | 13971903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptmaa | NA | coding | upstream | 9977 | 13854242 ~ 13857900 (+) |
| phb2b | phb2b,LOC107692360,LOC107591156,LOC108427714 | coding | upstream | 44085 | 13820119 ~ 13823792 (+) |
| pde6d | pde6d,LOC107590678,LOC107591155 | coding | upstream | 47958 | 13813916 ~ 13819919 (+) |
| usp13 | usp13,LOC107659032 | coding | upstream | 145443 | 13697792 ~ 13722434 (+) |
| ndufb5 | LOC107659010,LOC107709185,LOC107590679,LOC107578042 | coding | upstream | 171088 | 13693377 ~ 13696789 (+) |
| lrrc40 | lrrc40,LOC107709203,LOC107590628 | coding | downstream | 9322 | 13981225 ~ 13985829 (+) |
| shroom2a | LOC107659040,LOC107738857,LOC107591159,LOC107692366,LOC107590625 | coding | downstream | 107725 | 14079628 ~ 14116522 (+) |
| trnag-ucc_2 | NA | coding | downstream | 109030 | 14080933 ~ 14081004 (+) |
| cldn34a | cldn34,cldn34a,LOC107659013,LOC107709183,LOC107590626,LOC107692425,LOC107591192 | coding | downstream | 145888 | 14117791 ~ 14121182 (+) |
| wwc3 | LOC107590624,LOC107709196,LOC107659042,LOC107738905,LOC107692367 | coding | downstream | 161438 | 14133341 ~ 14170086 (+) |
| G45070 | NA | non-coding | upstream | 7268 | 13860255 ~ 13860609 (+) |
| G45056 | NA | non-coding | upstream | 31058 | 13836607 ~ 13836819 (+) |
| G44998 | LOC102783117 | non-coding | upstream | 205780 | 13661812 ~ 13662097 (+) |
| LOC122346715 | NA | non-coding | upstream | 210111 | 13656192 ~ 13657766 (+) |
| G44997 | bivm,LOC107732014,LOC107659026,LOC107548643,LOC107731835,LOC107692346 | non-coding | upstream | 216994 | 13650115 ~ 13650883 (+) |
| G45075 | lrrc7,LOC107659039,LOC107709201 | non-coding | downstream | 20842 | 13992745 ~ 13996966 (+) |
| G45084 | LOC107739195,LOC107591162,LOC107659043,LOC107709197,LOC107590677,LOC107692437 | non-coding | downstream | 44532 | 14016435 ~ 14128344 (+) |
| LOC122347615 | NA | non-coding | downstream | 157444 | 14129347 ~ 14131078 (+) |
| G45112 | NA | non-coding | downstream | 242308 | 14214211 ~ 14215282 (+) |
| G45095 | pde4b,LOC107659050 | non-coding | downstream | 291698 | 14263601 ~ 14286676 (+) |
| G44887 | NA | other | upstream | 457965 | 13394229 ~ 13409912 (+) |
| G44645 | NA | other | upstream | 758511 | 13108735 ~ 13109366 (+) |
| smx5 | lsm2,LSM2,smx5 | other | upstream | 785758 | 13080565 ~ 13082119 (+) |
| crocc2 | crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 | other | upstream | 1062177 | 12765821 ~ 12805700 (+) |
| LOC122347491 | LOC107593172,LOC107593170,LOC107694117,LOC107753639,LOC107552274 | other | upstream | 1340920 | 12521773 ~ 12526957 (+) |
| meltf | mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 | other | downstream | 270 | 13972173 ~ 13980286 (+) |
| pomgnt1 | pomgnt1,LOC107675946,LOC107692396 | other | downstream | 1264262 | 15236165 ~ 15244280 (+) |
| G45419 | sgip1,sgip1a,LOC107739126 | other | downstream | 1386958 | 15358861 ~ 15459386 (+) |
| G45448 | LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 | other | downstream | 1593078 | 15564981 ~ 15566668 (+) |
| G45894 | NA | other | downstream | 3214805 | 17186708 ~ 17187308 (+) |
