tex264a (tex264a,LOC107584457,LOC107749613,LOC107673607,LOC107750253,LOC107657929,LOC107567068)


Basic Information

Item Value
gene id tex264a
gene name tex264a,LOC107584457,LOC107749613,LOC107673607,LOC107750253,LOC107657929,LOC107567068
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 20842856 ~ 20900191 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242886.1
TCACGTGGTGCATCCAGGAAGCAATGCGTAAAGTGTTTCTGTGCAGAGGATAAACAAACGCTCAGCTGTGTCaataacaaaactaaaagaCGGGTGTAAACTGACCTGCAGTAAAGCATAgatactgtaaatgtaacatcTGCAGAGCGACACGGATGCAAATAGGCCTGTTCGGAAAGCGAAaggattgattttttttttttgcgtgtacCATCACAGCAACTGACAACTATTCATACACATTGAGCgatttgctgtttgtttgttttttttctgacagcCGGGCAAAAATGTCTGACTTTGTCATTTTACTGCTGATTCTGTTTTTGGTTATTTGTCTCATCTTAACTCTGGTGGGCTTCGTTTTTTACACCGGGCTTTTTTCTGAAGTCGTGATTCGAACTGGATCTCCTCCGGTGAAAAACATCACGATTGCATATAAGTTCAGAAAAGGATCGTACAGGGCCAGCGGAGCCGCTTTCACGGAGAGCTGCAGCATCGGACCGAAGTTGTCGTCTGTCGGTGTGTTTTACGATGACCCCAACCAGACTCAAGCAGATCAGTGTCGGTACGTAGTGGGCAGCATACTGTGTGAAAATGAAGAGAAACCTGATGAAGAGCTACAGCGCCTGTATGAGAAATTCGGCTACAAGGTCATTTCCTTCCCAGAAGTCACCTGTGCCGTAACTTCCTCGTTTCCAAACAGATGCACTCTGTCCCCCGTCTGCGGCGCTTACAGAGTCTATCCAGAGCTACAACAGTACATAAAGgaaaggAGTTTGAATGCGTACCCATTCCTGGAGATATGCAAAGGAGATCTGATCCATTACATGTGTCCTCTGGAGAATCAGGTGGACTTCTGTGTGCCAGAACTGCTTGAGAAGAACACATCTGATGACACTGAGGAGTCAGTGGAGCATAAAGATGCTGATGTTACAGAGATGGTGGCGGGTGAACCGGAGAAAAAGTCAAGCCCAGTGACCCAGGAAGTGGTTGAAGAGAGCAGGGATGTGATGGAGGCCTCAGCCCCATTACTGGAGAGCTCTCACCCGAGCCTGGGGGAGGAAGAGGGTCAAAGCGAGGATGGGGACCGAGGGGACAAGGGGTCCAGTGAGTCTGTGGGCAGTGGTTCTTCCTTTGAAGAGCTGGACATGGAAGTGGAAGAGGAGAAGGGGGAGAAGGAAAACGAAGCGGAGGAGGAAGACAATAATGGACAGCAGAAGCCTATGACGGTGGGAGAAACAATCGGGAACAGGGAGGAGTGAAGGATAAAGCGGATTAGAGGGAATGTGGGTGAATGATGAGCGCATATGTGAGTGTGGGTGCATGTGTGAGAGGGAGAaagtttgtctgtgtttttcaaatcatcaaaggctttttttttttcccttcttccTACGTCTTTGAAATTAACATCCCTAAAATATCCCAAAAGTTATTTCTTTCTTATCAGCAAACAAGCAGTTATCCCTTTCAGAACCTTTTATTAAAGACTTaatgaaatgcacattattcttcggctttgtatttatttctgagGAAACCAATTGTATATGTCGCTTTCTTTATTGTCGTTCAGGCAGCGAGTAAATCAGGCAGATTCTGAAAATGAGGTAACACTATTAACGCAACTAAATGAAGCTTAAtcagacattttatttcattaacgTGTTCTACAGATGATGTATTCAGTAACGTTTGCTTCGaaacatgaataattcattcCAAATGCTGTCTGTTGCTGTAGAATAGAACTGAAAAGAGTGAGAATAAAAAGTGCATGTTGTTAATGA

Function

symbol description
tex264a Predicted to be involved in protein-DNA covalent cross-linking repair and reticulophagy. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in several cellular components, including autophagosome membrane; endoplasmic reticulum membrane; and replication fork. Orthologous to human TEX264 (testis expressed 264, ER-phagy receptor).

NR:

description
PREDICTED: testis-expressed sequence 264 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242886.1 True 1793 mRNA 0.44 4 20842856 20900191

Neighbor

gene id symbol gene type direction distance location
grm2a grm2a,grm2,LOC107673619,LOC107657935,LOC107567094,LOC107749615,LOC107750271,LOC107584497 coding downstream 1465 20806763 ~ 20841391 (-)
parp3 parp3,LOC107749614,LOC107750280,LOC107658076,LOC107673445 coding downstream 37205 20800094 ~ 20805651 (-)
gpr61l LOC107658083,LOC107750281,LOC107749617,LOC107567083,LOC107584511,LOC107673479 coding downstream 43705 20795246 ~ 20799151 (-)
cav3 cav3,LOC107749619,LOC107584510,LOC107750282,LOC107658089,LOC107577493,LOC107673475 coding downstream 56301 20782444 ~ 20786555 (-)
hemk1 LOC107750260,LOC107712066,LOC107657999,LOC107567089,LOC107584453 coding downstream 411679 20423711 ~ 20431177 (-)
fancd2 fancd2,LOC107750252,LOC107749611,LOC107573736,LOC107584458,LOC107666962,LOC107673444 coding upstream 178 20900369 ~ 20915278 (-)
usp4 usp4,LOC107584456,LOC107667006,LOC107573741,LOC107657902 coding upstream 18147 20918338 ~ 20931314 (-)
emc3 emc3,LOC107667035,LOC107584459,LOC107657885,LOC107750250,LOC101173295 coding upstream 31870 20932061 ~ 20935193 (-)
sec61a1l sec61a1l,LOC108436273,LOC108440718,LOC107713494,LOC103023094,LOC103358725,LOC103036990,LOC107750248,LOC107657870 coding upstream 35884 20936075 ~ 20941899 (-)
ip6k2a ip6k2a,LOC107713495,LOC107666997,LOC107657877,LOC107750247,LOC107573738,LOC108436274 coding upstream 49298 20949489 ~ 20956207 (-)
G46934 srgap3,LOC107657972,LOC107712067,LOC107750258,LOC107673571 non-coding downstream 136007 20564351 ~ 20706849 (-)
G46922 NA non-coding downstream 150693 20498222 ~ 20692163 (-)
G46929 srgap3,LOC107657972,LOC107750258 non-coding downstream 243721 20554033 ~ 20599135 (-)
G46883 LOC107673597,LOC107712118,LOC107584452,LOC107567071,LOC107657992,LOC107567092,LOC107750261 non-coding downstream 420126 20419765 ~ 20422730 (-)
G46881 twf2,wdr82,LOC107712117,LOC107673495,LOC107750262,LOC107567090 non-coding downstream 423261 20360821 ~ 20419595 (-)
G47004 NA non-coding upstream 35231 20935422 ~ 20935654 (-)
LOC122347045 gnat1,LOC101072412,LOC107750245,LOC107657824,LOC107385205,LOC107666988 non-coding upstream 237282 21137473 ~ 21142766 (-)
G47122 zgc:113054,LOC107584471,LOC107713510,LOC107666963,LOC107750276,LOC107599438,LOC107680730,LOC108424032 non-coding upstream 428241 21328432 ~ 21329671 (-)
G47262 LOC107573738,LOC107657877,LOC107713495,LOC107666997,LOC107750247,LOC108436274 non-coding upstream 702098 21602289 ~ 21663492 (-)
G47283 NA non-coding upstream 900087 21800278 ~ 21801032 (-)
G46926 NA other downstream 311022 20529179 ~ 20531834 (-)
G46840 synpr,LOC107658112,LOC107673482,LOC107584506,LOC107712113,LOC107567085,LOC108436247 other downstream 676577 20161440 ~ 20166279 (-)
srsf3a LOC107712108,LOC107584442,LOC107673487,LOC107721197,LOC107667402 other downstream 740397 20096024 ~ 20102459 (-)
mustn1a mustn1a other downstream 842218 19998632 ~ 20000638 (-)
LOC122347177 LOC107584418 other downstream 886126 19899672 ~ 19956730 (-)
mdfic2 LOC107667017,LOC107713509,LOC107584472,LOC107680698,LOC107599432 other upstream 448428 21348619 ~ 21355381 (-)
tardbpb tardbp,LOC107713527,LOC107555974,LOC107666995,LOC107680706,LOC107561006 other upstream 1839781 22739972 ~ 22750947 (-)
G47535 LOC102793276,LOC101471251,LOC100701884,LOC102312415,LOC102199361 other upstream 2221592 23121783 ~ 23163157 (-)
G47590 NA other upstream 2499158 23399349 ~ 23400502 (-)
LOC122347542 grm8b,LOC107659486,LOC107698172,LOC107752348,LOC107575719,LOC107598887,LOC107753676 other upstream 2752998 23653189 ~ 23656456 (-)

Expression


Co-expression Network