LOC122347575


Basic Information

Item Value
gene id LOC122347575
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 14708508 ~ 14712351 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242955.1
CTTAATGCCTGTGTGGATACCCGTCAGCCACCAGCGCCATCTACCTCACCGCCTCCGATTTCAGCCGACGAGCCCATGATTACGGACACCTACCATCTCACTCCCGCCGAACGCACCCGCCGACTTGCTGCCAACCTATGTCTCTACTGTGGACACCCGAATCACCGCCTCAACACCTGTCCTGTCCGGCCCCCGCGCCCAGCGACGCGGAACTACCCCCCCCACCTCCCGAGATCGAACCCACCGAGAACGTCTACCGGGTCCAGGAAATCCTCGGCTCTCGGCGACGGGGCAACCGCCTCCAGTACCTAGTGGACTGGGAGGGATTCGGCCCTGAGGAGCGGTCGTGGGTAAGCCGCGATGACATCTTGGACCCGACGCTCCTCCAAGACTTCCACCAGGCCCATCCAGAATGCCCAGCTCCACGTCCCCGTGGCCGTCCCCGTCGCCGTTCGCGGGTGCCAGGAGGCACCCGTAGAGGGGGGGGtagtgtcacaaacacacccaccagatcaccgtctcccacgccaatcacccgctcatcatctccggaattctagccacctgttcaccacacctgtTAGTAATTAACTCACCTCCACATATACTCCAGAAACCCAGTCTTTCCTCGGCTGGGATTGATGTTACGTTCACCTGCTTCTGTCTGCACTCTCGAACTCGTTCTTCCTGTGACTACCCCTGCTGATACGGACTACCCacatttgagtatttgtt

Function

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242955.1 True 735 mRNA 0.60 2 14708508 14712351

Neighbor

gene id symbol gene type direction distance location
jak1 LOC107659055,LOC107709186,LOC107556544,LOC107739023,LOC107591175,LOC107692376 coding upstream 185192 14495467 ~ 14523316 (+)
ttc22 ttc22,LOC107692368,LOC107590622,LOC107659045,LOC107591163 coding upstream 511189 14192585 ~ 14197319 (+)
wwc3 LOC107590624,LOC107709196,LOC107659042,LOC107738905,LOC107692367 coding upstream 538422 14133341 ~ 14170086 (+)
cldn34a cldn34,cldn34a,LOC107659013,LOC107709183,LOC107590626,LOC107692425,LOC107591192 coding upstream 587326 14117791 ~ 14121182 (+)
shroom2a LOC107659040,LOC107738857,LOC107591159,LOC107692366,LOC107590625 coding upstream 591986 14079628 ~ 14116522 (+)
LOC122347452 LOC107692384,LOC107739088 coding downstream 68575 14780926 ~ 14790192 (+)
dock7 dock7,LOC107591182 coding downstream 203515 14915866 ~ 14957203 (+)
kank4 kank4,LOC107731645,LOC107704518,LOC107717130,LOC107692389,LOC107556542,LOC107591186 coding downstream 252561 14964912 ~ 15008069 (+)
cyldl LOC107556989,LOC107731632,LOC107704521,LOC107692392,LOC107717142,LOC107594643 coding downstream 435779 15148130 ~ 15154622 (+)
ghrhrb ghrhrb,LOC107704523,LOC107692395,LOC107556991,LOC107731650,LOC107717144 coding downstream 450642 15162993 ~ 15184666 (+)
G45182 NA non-coding upstream 71827 14586502 ~ 14636681 (+)
LOC122346521 NA non-coding upstream 214475 14491806 ~ 14494033 (+)
G45131 NA non-coding upstream 305571 14402508 ~ 14402937 (+)
G45127 pde4b,LOC107659050,LOC107739135,LOC107590663,LOC107591166 non-coding upstream 336414 14371274 ~ 14372094 (+)
G45125 pde4b,LOC107591166,LOC107692372,LOC107659050,LOC108443455,LOC106584037 non-coding upstream 344582 14362347 ~ 14363926 (+)
G45312 pgm1,LOC107704513,LOC107731639,LOC107556550,LOC107692428,LOC107739071,LOC107591179 non-coding downstream 54294 14766645 ~ 14767982 (+)
G45333 foxd3,LOC107717135,LOC107591180,LOC107731647,LOC107692383,LOC107704516 non-coding downstream 92954 14805305 ~ 14813679 (+)
G45364 mafa,mafaa,LOC107717140,LOC107591187,LOC107556987,LOC107731633 non-coding downstream 297895 15010246 ~ 15086529 (+)
G45371 NA non-coding downstream 387486 15099837 ~ 15114651 (+)
LOC122347325 NA non-coding downstream 518470 15230821 ~ 15231746 (+)
meltf mfi2,LOC107692364,LOC107709202,LOC107659038,LOC107591189,LOC107739178,LOC107590629 other upstream 728222 13972173 ~ 13980286 (+)
G44887 NA other upstream 1298596 13394229 ~ 13409912 (+)
G44645 NA other upstream 1599142 13108735 ~ 13109366 (+)
smx5 lsm2,LSM2,smx5 other upstream 1626389 13080565 ~ 13082119 (+)
crocc2 crocc2,LOC107593190,LOC107753661,LOC107694109,LOC107752664,LOC107552261,LOC107696746 other upstream 1902808 12765821 ~ 12805700 (+)
pomgnt1 pomgnt1,LOC107675946,LOC107692396 other downstream 523814 15236165 ~ 15244280 (+)
G45419 sgip1,sgip1a,LOC107739126 other downstream 646510 15358861 ~ 15459386 (+)
G45448 LOC107585177,LOC107673508,LOC107711046,LOC107748403,LOC107582692 other downstream 852630 15564981 ~ 15566668 (+)
G45894 NA other downstream 2474357 17186708 ~ 17187308 (+)
G46022 NA other downstream 3282840 17995191 ~ 17996717 (+)

Expression


Co-expression Network