LOC122347223


Basic Information

Item Value
gene id LOC122347223
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 19149746 ~ 19151694 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251202.1
ACTGAAGGCAAATCTCGCACGCACTCTGAACTGCCCTCCTGAAAAGGCTTTTAATcgtattatttacttatttataccTTTCTACCGAGAAACAGACGCATCAGATTGTTGCAAAACGAATCCCGATTGGCCGGCTGCCCTTGACCTTTGACCTACAATGAAGTAACATTCTAGTTCCACGCACATTCCACAGTGATCTTTGTAGTCTGTGAGAGGTTACGACCTGTTATATCACCGTAACCATCAGAACATTTTGTACGTGGGAAAAGGAAAGAGGAGAATGAAGACAATAGCCCATATGTTCTCGTGAGAGGACGACGGAAACAGCCAATGGATAACCATGAGAGGCCCCTCTCTctgcatcccttacttccgttCATGCCTCTTCGATCTTCCTTTCACTACGTCACTCCATCATATTTCTCTTCCTTTATCTCAACGTTGGCCGTCAATCCTTACAGCTCACATGCCTGCGCACAAACACGACACAGAACCGCTCTTCTCCCGCTGTGTGCCACAGGGCTGAATTGTCTCATGTGATCAGACTAACACAATCAAActtgtatgttatttttctcttatgcatacacacgcacgcacacagcTAGCCTTCCAGGCCTGAAACAGAAGCCTCTGCTATACTACTCAGGCAGACACACCCAAGTAAAACATGAACTCATCTCCTTACAAAcccaaatattatatttaaaaaaaaaaggctggcCGTCATAGATGGCTGAACATTTCCATGACTTACTGCGGTAACTGTAGAGACCAGAAATCGCCTACTGCTATTAGGTTAAGTAGGTTATTGGCTGGGCCAtaaattgttttgtgttgcatttatgtttttcttaataGAGCAgcaaaatgctacagtaaatgGAGTTCATTTCGTTTCTCTCATCATTTATGCACGCTTTCCGACCCCGTGTGAGGGAATGGCCTTGCCtcgttctttttatttatttatttttgccacatacaatgaaaatgaacGGTGCACACAGCCTGTCGTTCTTTTGTGTTccggagaagaaagaaagtcacaggCTGCAGGCTTGCAACAACAGGACGAGTACACGAAGCGTTCCTTCGGCGTAGAACCAAGTGCCTGACACACATTTCTCCTCGTTTACACGCGAATATAACGCTCGACCTCATGCGGACAAACTGTTTACCTCGCTGGTGCCTCTGACGTCACGACACACCCCTCGCGCGCGTGAGCGCGTGTGAgtgagcgtgagtgtgtgtgcgcgcgcagcAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251202.1 True 1267 lncRNA 0.46 3 19149746 19151694

Neighbor

gene id symbol gene type direction distance location
hdac7b NA coding downstream 25770 19113678 ~ 19123976 (-)
cnga3a LOC107585144,LOC107711084,LOC107673541,LOC107685324,LOC107733584 coding downstream 70855 19071405 ~ 19078891 (-)
LOC122346582 LOC107584426,LOC107673614,LOC107712092 coding downstream 161306 18986050 ~ 18988440 (-)
LOC122347578 LOC107678224,LOC107752100,LOC107581387 coding downstream 384263 18763245 ~ 18765483 (-)
LOC122346645 LOC106676354,LOC106674584,LOC106676400 coding downstream 405630 18743065 ~ 18744116 (-)
tns2b LOC107711076,LOC107673525,LOC107585141 coding upstream 1345 19153039 ~ 19173171 (-)
eif4bb eif4bb,LOC107673526,LOC107711078,LOC107585139,LOC107582715,LOC107733597 coding upstream 24172 19175866 ~ 19187427 (-)
LOC122347293 LOC107711003,LOC107667371,LOC107585181,LOC107673453,LOC107711002 coding upstream 36801 19188495 ~ 19190509 (-)
stat2 LOC107673542,LOC107711071,LOC107585138,LOC107667368,LOC107733592,LOC107582712 coding upstream 69599 19221293 ~ 19232799 (-)
apof LOC107711072,LOC107585209,LOC107673462 coding upstream 81577 19233271 ~ 19236817 (-)
G46477 LOC107673579,LOC107711085,LOC107585184,LOC107733604,LOC107685287,LOC107579827 non-coding downstream 100910 19044628 ~ 19048836 (-)
G46476 NA non-coding downstream 105877 19043616 ~ 19043869 (-)
G46463 p4htm,LOC107673589,LOC107712096,LOC107584428,LOC107721183,LOC107667396 non-coding downstream 177376 18970170 ~ 18972370 (-)
G46444 NA non-coding downstream 263346 18882852 ~ 18886400 (-)
G46439 NA non-coding downstream 291275 18857712 ~ 18858471 (-)
G46509 NA non-coding upstream 60945 19212639 ~ 19242811 (-)
G46540 mettl7a,LOC107711020,LOC107585130,LOC107740572,LOC107667380,LOC107673452,LOC107711000,LOC107582798 non-coding upstream 241783 19393477 ~ 19397730 (-)
LOC122347383 LOC107711016,LOC107673510 non-coding upstream 454668 19606362 ~ 19607056 (-)
G46658 NA non-coding upstream 639948 19791642 ~ 19792328 (-)
G46647 LOC107585105,LOC107711036,LOC107673557 non-coding upstream 649549 19801243 ~ 19802266 (-)
vdrb vdrb,LOC107585146,LOC107673565,LOC107711077,LOC107582718,LOC107667372,LOC107733590 other downstream 15 19115061 ~ 19149731 (-)
G46478 NA other downstream 93615 19055146 ~ 19056131 (-)
G46423 sec23b,LOC107753900,LOC107752097,LOC107551934,LOC107659946 other downstream 432258 18714174 ~ 18717488 (-)
LOC122347235 NA other downstream 442150 18706623 ~ 18707596 (-)
G46420 LOC107752101,LOC107678225,LOC107581302 other downstream 504612 18644306 ~ 18645134 (-)
tsfm tsfm,LOC107711018,LOC107585120 other upstream 401623 19553317 ~ 19555942 (-)
tomm6 NA other upstream 689785 19841479 ~ 19842994 (-)
tspo tspo,LOC107721166,LOC107568174,LOC107584504,LOC107667354,LOC107673503 other upstream 691350 19843044 ~ 19847432 (-)
LOC122347177 LOC107584418 other upstream 747978 19899672 ~ 19956730 (-)
mustn1a mustn1a other upstream 846938 19998632 ~ 20000638 (-)

Expression


Co-expression Network