G26754


Basic Information

Item Value
gene id G26754
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3172410 ~ 3179358 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30183
CTGCTGGACTTGGCATGATAGGTGTTCCTGGAGGACATCCACCACCTCCTGCTCCTCCTGGAGGACCCTGTGAAAGCAGGACAGCAGAGACTGAGACTGCAGCCAGTTTCTTTCATGACAGGCAACATCATAAATGAAGAAAGAAGAAACGATCAGTTACCACATATGTTCCTGGGGATGATGAGGAATATGGGATCGTGTTTCCATTATTAGGATTAGGCCACAGTCTGCCTGCTCCTGTTCCCATGTTCACGCCTGGCATTCCAGGGCCCATGGAGTTTGGAGGCCTCATTCCTCCACCATAGTTCTGTAATGATAACCAAGGATCAGGCTGTGGTCCCGGTCCCATCGGGCCCATTCCACGAGGAGCGTTCATTCTCTGCATGGTTGCCAAGTTTGGATGGCCTGTTGGTCGTGTGGGGTCCATCATATTTGGAGGCAAAGGCTGCCCACCGGGAGGCGGGTTTCCCATTCTGATGGGCGGCCGAGGTCCTCCAGCATAGCGAGGAGACATAAAAGGCTGTCCATGCACCCCCATCATGTTAGAGTTTGGAGGTAGCTGAGCATGAGGGGAGGCTTGGGAACCAGGTGGTCCCTGAAAGAATCCGGGGGGCATGGGGCCACCTGACATCCCGTCCCCGGGGGGCATGTTGCCTAGGACTGGACTTGG
>TU30185
CTGCTGGACTTGGCATGATAGGTGTTCCTGGAGGACATCCACCACCTCCTGCTCCTCCTGGAGGACCCTGTGAAAGCAGGACAGCAGAGACTGAGACTGCAGCCAGTTTCTTTCATGACAGGCAACATCATAAATGAAGAAAGAAGAAACGATCAGTTACCACATATGTTCCTGGGGATGATGAGGAATATGGGATCGTGTTTCCATTATTAGGATTAGGCCACAGTCTGCCTGCTCCTGTTCCCATGTTCACGCCTGGCATTCCAGGGCCCATGGAGTTTGGAGGCCTCATTCCTCCACCATAGTTCTGTAATGATAACCAAGGATCAGGCTGTGGTCCCGGTCCCATCGGGCCCATTCCACGAGGAGCGTTCATTCTCTGCATGGTTGCCAAGTTTGGATGGCCTGTTGGTCGTGTGGGGTCCATCATATTTGGAGGCAAAGGCTGCCCACCGGGAGGCGGGTTTCCCATTCTGATGGGCGGCCGAGGTCCTCCAGCATAGCGAGGAGACATAAAAGGCTGTCCATGCACCCCCATCATGTTAGAGTTTGGAGGTAGCTGAGCATGAGGGGAGGCTTGGGAACCAGGTGGTCCCTGCAGAGAGGGTGGGGGTGGGGGGAGCAAGAGGAGGTTGCCATAGTACCAGCAGCAAAATGCCAAGAGAAAGACAGAGCAAAGTCAAAGACAGGACAGGTGAAAGCGACAGGTGCAGATCAAGAGAACAGAGCCGAGGGCAAAAGCTCAGAACTAGTTTGATGTGGAGCTGATATCTCTCTTGGTTCTTAAAGGATTAGTTCACTTCAGAATTCAAATTTCCTGATAATTTACTCACCCCCACTTCATCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30183 False 670 lncRNA 0.55 8 3172410 3179358
TU30185 True 848 lncRNA 0.52 7 3174448 3179358

Neighbor

gene id symbol gene type direction distance location
CI01000004_03133701_03141953 ACOT11, ACOT11A coding downstream 30431 3133674 ~ 3141979 (-)
CI01000004_03106070_03109051 NA coding downstream 63359 3106042 ~ 3109051 (-)
CI01000004_03070803_03073454 LHX8, LHX8A coding downstream 98929 3070616 ~ 3073481 (-)
CI01000004_02953160_02955378 NA coding downstream 216920 2953146 ~ 2955490 (-)
CI01000004_02834634_02863535 GREB1L coding downstream 308812 2832744 ~ 2863598 (-)
CI01000004_03187077_03196194 MRPL37 coding upstream 7719 3187077 ~ 3196198 (-)
CI01000004_03204599_03205569 TCEANC2 coding upstream 25214 3204572 ~ 3206068 (-)
CI01000004_03214098_03222707 GLMNA, GLMN coding upstream 34740 3214098 ~ 3222707 (-)
CI01000004_03238528_03240932 GFI1AA, GFI1 coding upstream 59000 3238358 ~ 3241491 (-)
CI01000004_03244252_03265862 EVI5 coding upstream 64545 3243903 ~ 3266047 (-)
G26744 NA non-coding downstream 39645 3132556 ~ 3132765 (-)
G26752 NA non-coding downstream 50150 3119950 ~ 3122260 (-)
G26751 NA non-coding downstream 55129 3116786 ~ 3117281 (-)
G26714 NA non-coding downstream 103877 3020161 ~ 3068533 (-)
G26691 NA non-coding downstream 205425 2965700 ~ 2966985 (-)
G26820 NA non-coding upstream 35532 3214890 ~ 3215202 (-)
G26788 NA non-coding upstream 88325 3267683 ~ 3275721 (-)
G26810 NA non-coding upstream 121441 3300799 ~ 3306425 (-)
G26812 NA non-coding upstream 151387 3330745 ~ 3332243 (-)
G26811 NA non-coding upstream 163456 3342814 ~ 3355165 (-)
CI01000004_01773383_01774888 INSL5B other downstream 1397469 1772928 ~ 1774942 (-)
G27746 NA other upstream 1998869 5178227 ~ 5203724 (-)
CI01000004_05617072_05627369 NA other upstream 2441025 5616644 ~ 5628289 (-)
CI01000004_06539836_06541252 NA other upstream 3355469 6538904 ~ 6541252 (-)
G29388 NA other upstream 3451935 6631293 ~ 6631907 (-)

Expression


Co-expression Network