trnap-ugg_4


Basic Information

Item Value
gene id trnap-ugg_4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 11972709 ~ 11972780 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1088
ggctcgttggtctaggggtatgattctcgctttgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1088 True 72 tRNA 0.61 1 11972709 11972780

Neighbor

gene id symbol gene type direction distance location
trnag-ucc_1 NA coding downstream 158 11972480 ~ 11972551 (-)
sox14 sox14,LOC107679857,LOC107756185,LOC107713406,LOC107694108,LOC103365676 coding downstream 121478 11850258 ~ 11851231 (-)
hs2st1b hs2st1b,LOC107694133,LOC107679861,LOC107557741,LOC106560611,LOC108427652 coding downstream 186547 11734816 ~ 11786162 (-)
lmo4b lmo4,lmo4b,LOC107593176 coding downstream 264229 11695648 ~ 11708480 (-)
pkn2b zgc:153916,LOC107749976,LOC107662805,LOC107564625,LOC107698884,LOC108413223 coding downstream 491516 11449837 ~ 11481193 (-)
hdlbpa hdlbp,hdlbpa,LOC107694132,LOC107696756 coding upstream 685 11973465 ~ 11998495 (-)
stk25a LOC107733254,LOC107593165,LOC107694119,LOC107696758 coding upstream 83112 12055892 ~ 12062418 (-)
dtymk dtymk,LOC107593168,LOC107694123,LOC107696762,LOC107552279 coding upstream 109197 12081977 ~ 12083540 (-)
agxta agxta,agxt,LOC107696749,LOC107552266,LOC108427662 coding upstream 111501 12084281 ~ 12087593 (-)
zgc:103559 zgc:103559,LOC107752646,LOC107696750,LOC107552265,LOC107733245,LOC108427664 coding upstream 115444 12088224 ~ 12094740 (-)
G44501 NA non-coding downstream 543946 11428125 ~ 11428763 (-)
G44460 NA non-coding downstream 730203 11242277 ~ 11242506 (-)
G44459 NA non-coding downstream 730677 11241637 ~ 11242032 (-)
G44457 NA non-coding downstream 733245 11239119 ~ 11239464 (-)
G44452 NA non-coding downstream 734511 11237962 ~ 11238198 (-)
G44705 NA non-coding upstream 177054 12149834 ~ 12437749 (-)
G44730 LOC107552274,LOC107593170,LOC107694117,LOC107696767,LOC107753639 non-coding upstream 551176 12523956 ~ 12525300 (-)
G44737 NA non-coding upstream 623066 12595846 ~ 12965513 (-)
LOC122347051 tmem131,LOC107659030,LOC107692350,LOC107732007,LOC107548642 non-coding upstream 755351 12728131 ~ 12730973 (-)
G44773 NA non-coding upstream 917936 12890716 ~ 12891336 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 903243 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 987577 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 1137184 10578989 ~ 10835525 (-)
G44358 zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC107660467 other downstream 1255968 10710045 ~ 10716741 (-)
usp43a usp43a,LOC107733909,LOC107704008,LOC107555366,LOC107659855,LOC107728176,LOC107561022 other downstream 1463706 10434204 ~ 10509003 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other upstream 552976 12525756 ~ 12897718 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 1682480 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 1745422 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 2187695 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 3354803 15327583 ~ 15330851 (-)

Expression


Co-expression Network