trnap-cgg_1


Basic Information

Item Value
gene id trnap-cgg_1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 12971478 ~ 12971549 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1091
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1091 True 72 tRNA 0.63 1 12971478 12971549

Neighbor

gene id symbol gene type direction distance location
trnap-ugg_5 NA coding downstream 324 12971083 ~ 12971154 (-)
im:7152348 LOC107717945,LOC107694124,LOC107590683,LOC107752641,LOC107696753,LOC107552260 coding downstream 850 12967100 ~ 12970628 (-)
LOC122346505 sox14,LOC107679857,LOC107756185,LOC107713406,LOC107694108,LOC103365676 coding downstream 706765 12262919 ~ 12264713 (-)
zgc:103559 zgc:103559,LOC107752646,LOC107696750,LOC107552265,LOC107733245,LOC108427664 coding downstream 876738 12088224 ~ 12094740 (-)
agxta agxta,agxt,LOC107696749,LOC107552266,LOC108427662 coding downstream 883885 12084281 ~ 12087593 (-)
bcl6aa bcl6,LOC107717934,LOC107752633 coding upstream 114551 13086100 ~ 13109224 (-)
tbc1d23 tbc1d23,LOC107731832,LOC107590650,LOC107574489,LOC107752629 coding upstream 419154 13390703 ~ 13407082 (-)
tomm70a tomm70,tomm70a,LOC107659020,LOC107696780,LOC107574490 coding upstream 436017 13407566 ~ 13416487 (-)
trnaa-cgc NA coding upstream 449098 13420647 ~ 13420718 (-)
trnaa-cgc_1 NA coding upstream 449280 13420829 ~ 13420900 (-)
G44737 NA non-coding downstream 5965 12595846 ~ 12965513 (-)
G44773 NA non-coding downstream 80142 12890716 ~ 12891336 (-)
LOC122347051 tmem131,LOC107659030,LOC107692350,LOC107732007,LOC107548642 non-coding downstream 240505 12728131 ~ 12730973 (-)
G44730 LOC107552274,LOC107593170,LOC107694117,LOC107696767,LOC107753639 non-coding downstream 446178 12523956 ~ 12525300 (-)
G44705 NA non-coding downstream 533729 12149834 ~ 12437749 (-)
G44784 NA non-coding upstream 13263 12984812 ~ 12985135 (-)
G44787 NA non-coding upstream 17556 12989105 ~ 12989307 (-)
G44798 NA non-coding upstream 53558 13025107 ~ 13026209 (-)
LOC122346940 NA non-coding upstream 242493 13214042 ~ 13243671 (-)
G44863 NA non-coding upstream 308134 13279683 ~ 13279882 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 73760 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 1902012 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 1986346 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2135953 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 683711 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 746653 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 1188926 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 2356034 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2517569 15489118 ~ 15490685 (-)

Expression


Co-expression Network