trnaa-cgc_1


Basic Information

Item Value
gene id trnaa-cgc_1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13420829 ~ 13420900 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1093
ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1093 True 72 tRNA 0.56 1 13420829 13420900

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc NA coding downstream 111 13420647 ~ 13420718 (-)
tomm70a tomm70,tomm70a,LOC107659020,LOC107696780,LOC107574490 coding downstream 4342 13407566 ~ 13416487 (-)
tbc1d23 tbc1d23,LOC107731832,LOC107590650,LOC107574489,LOC107752629 coding downstream 13747 13390703 ~ 13407082 (-)
bcl6aa bcl6,LOC107717934,LOC107752633 coding downstream 311605 13086100 ~ 13109224 (-)
trnap-cgg_1 NA coding downstream 449280 12971478 ~ 12971549 (-)
trnaa-ugc_1 NA coding upstream 420 13421320 ~ 13421391 (-)
trnaa-cgc_2 NA coding upstream 724 13421624 ~ 13421695 (-)
trnaa-cgc_3 NA coding upstream 905 13421805 ~ 13421876 (-)
trnaa-ugc_2 NA coding upstream 2004 13422904 ~ 13422975 (-)
trnaa-ugc_3 NA coding upstream 3454 13424354 ~ 13424425 (-)
G44942 NA non-coding downstream 63308 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 66046 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 66649 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 67179 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 67760 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 116044 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 272438 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 276599 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 402772 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 416405 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 523111 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2351363 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2435697 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2585304 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 234360 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 297302 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 739575 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1906683 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2068218 15489118 ~ 15490685 (-)

Expression


Co-expression Network