trnaa-ugc_25


Basic Information

Item Value
gene id trnaa-ugc_25
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13431830 ~ 13431901 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1125
GGGgttgtagctcagtggtagagtgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1125 True 72 tRNA 0.53 1 13431830 13431901

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc_24 NA coding downstream 110 13431649 ~ 13431720 (-)
trnaa-ugc_23 NA coding downstream 767 13430992 ~ 13431063 (-)
trnaa-cgc_8 NA coding downstream 949 13430810 ~ 13430881 (-)
trnaa-ugc_22 NA coding downstream 1241 13430518 ~ 13430589 (-)
trnaa-ugc_21 NA coding downstream 1404 13430355 ~ 13430426 (-)
trnaa-ugc_26 NA coding upstream 303 13432204 ~ 13432275 (-)
trnaa-ugc_27 NA coding upstream 657 13432558 ~ 13432629 (-)
trnaa-ugc_28 NA coding upstream 837 13432738 ~ 13432809 (-)
trnaa-ugc_29 NA coding upstream 1196 13433097 ~ 13433168 (-)
trnaa-ugc_30 NA coding upstream 1508 13433409 ~ 13433480 (-)
G44942 NA non-coding downstream 74309 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 77047 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 77650 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 78180 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 78761 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 105043 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 261437 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 265598 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 391771 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 405404 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 534112 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2362364 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2446698 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2596305 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 223359 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 286301 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 728574 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1895682 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2057217 15489118 ~ 15490685 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnaa-ugc-171 NA coding NC_048586.1 CM023240.2 165426 ~ 165497 (+)