trnaa-cgc_15


Basic Information

Item Value
gene id trnaa-cgc_15
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13441990 ~ 13442061 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1160
ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1160 True 72 tRNA 0.56 1 13441990 13442061

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc_53 NA coding downstream 423 13441496 ~ 13441567 (-)
trnaa-ugc_52 NA coding downstream 599 13441320 ~ 13441391 (-)
trnaa-cgc_14 NA coding downstream 964 13440955 ~ 13441026 (-)
trnaa-ugc_51 NA coding downstream 1270 13440649 ~ 13440720 (-)
trnaa-ugc_50 NA coding downstream 1733 13440186 ~ 13440257 (-)
trnaa-ugc_54 NA coding upstream 294 13442355 ~ 13442426 (-)
trnaa-ugc_55 NA coding upstream 475 13442536 ~ 13442607 (-)
trnaa-cgc_16 NA coding upstream 1257 13443318 ~ 13443389 (-)
trnaa-cgc_17 NA coding upstream 1439 13443500 ~ 13443571 (-)
trnaa-ugc_56 NA coding upstream 1623 13443684 ~ 13443755 (-)
G44942 NA non-coding downstream 84469 13356987 ~ 13357521 (-)
G44941 NA non-coding downstream 87207 13354307 ~ 13354783 (-)
G44940 NA non-coding downstream 87810 13353915 ~ 13354180 (-)
G44939 NA non-coding downstream 88340 13353364 ~ 13353650 (-)
G44938 NA non-coding downstream 88921 13352462 ~ 13353069 (-)
G45014 NA non-coding upstream 94883 13536944 ~ 13611593 (-)
G45036 NA non-coding upstream 251277 13693338 ~ 13694164 (-)
G45039 NA non-coding upstream 255438 13697499 ~ 13697711 (-)
LOC122347350 NA non-coding upstream 381611 13823672 ~ 13835591 (-)
G45058 NA non-coding upstream 395244 13837305 ~ 13837538 (-)
LOC122347614 rab6ba,rab6b,LOC107696768,LOC107552273,LOC102207753,LOC100696791,LOC107694122,LOC103354239 other downstream 544272 12525756 ~ 12897718 (-)
brdt brdt,LOC107678354,LOC107749988,LOC107675431,LOC107730697,LOC107564432 other downstream 2372524 11055035 ~ 11069466 (-)
gng12b LOC107555383,LOC107678346,LOC107705318,LOC107564436,LOC105895117,LOC108271932 other downstream 2456858 10948692 ~ 10985132 (-)
ntn1a ntn1a,LOC107555375,LOC107704007,LOC107733905,LOC107569361,LOC107757426,LOC107660463,LOC105903456,LOC106587088,LOC105012279 other downstream 2606465 10578989 ~ 10835525 (-)
tmem131 tmem131,LOC107659030,LOC107692350,LOC107732007 other upstream 213199 13655260 ~ 13681294 (-)
pex5la pex5la,LOC107709207,LOC107590632,LOC107659033,LOC107692357,LOC107548659,LOC107732026 other upstream 276141 13718202 ~ 13785903 (-)
G45257 ttc22,LOC107590622,LOC107692368,LOC107659045,LOC107591163 other upstream 718414 14160475 ~ 14193166 (-)
LOC122347580 ttc4,LOC107738930,LOC107659046,LOC107709194,LOC107692369 other upstream 1885522 15327583 ~ 15330851 (-)
insl5a LOC107692440 other upstream 2047057 15489118 ~ 15490685 (-)

Expression


Co-expression Network